FFCP PHASE1:Hg19::chr11:131781224..131781254,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50863 | |EntrezGene=50863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17941 | |HGNC=17941 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-80bp_to_ENST00000479431_5end | |association_with_transcript=-80bp_to_ENST00000479431_5end | ||
|cluster_id=chr11:131781224..131781254,+ | |||
|coexpression_cluster_id=C2112 | |||
|description=CAGE_peak_5_at_NTM_5end | |description=CAGE_peak_5_at_NTM_5end | ||
|id=chr11:131781224..131781254,+ | |id=chr11:131781224..131781254,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.42e-27!180;CL:0000057!7.13e-17!75;CL:0000359!4.52e-14!32;CL:0000192!2.47e-13!42;CL:0000514!2.47e-13!42;CL:0000680!3.80e-13!57;CL:0000056!3.80e-13!57;CL:0000355!3.80e-13!57;CL:0000183!4.83e-12!59;CL:0000187!5.98e-12!54;CL:0000393!3.04e-10!60;CL:0000211!3.04e-10!60;CL:0002620!4.82e-08!23;CL:0002539!2.75e-07!10;CL:0000220!2.93e-07!246;CL:0002321!3.71e-07!248 | |ontology_enrichment_celltype=CL:0000055!1.42e-27!180;CL:0000057!7.13e-17!75;CL:0000359!4.52e-14!32;CL:0000192!2.47e-13!42;CL:0000514!2.47e-13!42;CL:0000680!3.80e-13!57;CL:0000056!3.80e-13!57;CL:0000355!3.80e-13!57;CL:0000183!4.83e-12!59;CL:0000187!5.98e-12!54;CL:0000393!3.04e-10!60;CL:0000211!3.04e-10!60;CL:0002620!4.82e-08!23;CL:0002539!2.75e-07!10;CL:0000220!2.93e-07!246;CL:0002321!3.71e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000359;9.59e-15;32!CL:0000192;1.86e-09;43!CL:0002539;6.89e-09;10!CL:0002334;3.84e-08;12!CL:0000057;7.15e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.24e-18,76;CL:0000359,4.13e-15,32;CL:0000192,1.37e-12,43;CL:0000514,1.37e-12,43;CL:0000680,4.33e-12,58;CL:0000056,4.33e-12,58;CL:0000355,4.33e-12,58;CL:0000187,1.28e-10,55;CL:0002539,1.16e-08,10;CL:0000393,1.21e-08,61;CL:0000211,1.21e-08,61;CL:0002334,3.47e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000514;1.86e-09;43 | |||
|ontology_enrichment_disease=DOID:2394!1.86e-08!14 | |ontology_enrichment_disease=DOID:2394!1.86e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.92e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.71e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.42e-22!365;UBERON:0000914!2.04e-18!83;UBERON:0002329!2.04e-18!83;UBERON:0003077!2.04e-18!83;UBERON:0003059!2.04e-18!83;UBERON:0007282!2.04e-18!83;UBERON:0009618!2.04e-18!83;UBERON:0007285!2.04e-18!83;UBERON:0000119!1.00e-16!312;UBERON:0000486!1.20e-16!82;UBERON:0000483!1.61e-16!309;UBERON:0004290!3.88e-14!70;UBERON:0000033!6.40e-13!123;UBERON:0001637!8.83e-13!42;UBERON:0003509!8.83e-13!42;UBERON:0004572!8.83e-13!42;UBERON:0001134!2.93e-12!61;UBERON:0002036!2.93e-12!61;UBERON:0003082!2.93e-12!61;UBERON:0000153!2.97e-12!129;UBERON:0007811!2.97e-12!129;UBERON:0000481!3.36e-12!347;UBERON:0002385!9.33e-12!63;UBERON:0001015!9.33e-12!63;UBERON:0000383!9.33e-12!63;UBERON:0000467!3.15e-11!625;UBERON:0000468!3.37e-11!659;UBERON:0000480!4.49e-11!626;UBERON:0005256!9.91e-11!143;UBERON:0004872!3.57e-10!84;UBERON:0000924!3.73e-10!173;UBERON:0006601!3.73e-10!173;UBERON:0004573!4.28e-10!33;UBERON:0004571!4.28e-10!33;UBERON:0002049!5.80e-10!79;UBERON:0007798!5.80e-10!79;UBERON:0000477!6.51e-10!286;UBERON:0004121!6.71e-10!169;UBERON:0003102!8.28e-10!95;UBERON:0001981!1.02e-09!60;UBERON:0007500!1.02e-09!60;UBERON:0004537!1.02e-09!60;UBERON:0006965!1.02e-09!60;UBERON:0000025!7.00e-09!194;UBERON:0004111!8.70e-09!241;UBERON:0002097!1.45e-08!40;UBERON:0002199!3.18e-08!45;UBERON:0002416!3.18e-08!45;UBERON:0000055!5.83e-08!69;UBERON:0000922!1.02e-07!612;UBERON:0002616!1.11e-07!59;UBERON:0000923!1.17e-07!604;UBERON:0005291!1.17e-07!604;UBERON:0006598!1.17e-07!604;UBERON:0002532!1.17e-07!604;UBERON:0002346!1.23e-07!90;UBERON:0000955!1.36e-07!69;UBERON:0006238!1.36e-07!69;UBERON:0002050!1.57e-07!605;UBERON:0005423!1.57e-07!605;UBERON:0003075!2.00e-07!86;UBERON:0007284!2.00e-07!86;UBERON:0004237!2.75e-07!10;UBERON:0004695!2.75e-07!10;UBERON:0002111!2.75e-07!10;UBERON:0004178!2.75e-07!10;UBERON:0001049!9.15e-07!57;UBERON:0005068!9.15e-07!57;UBERON:0006241!9.15e-07!57;UBERON:0007135!9.15e-07!57 | |ontology_enrichment_uberon=UBERON:0000475!2.42e-22!365;UBERON:0000914!2.04e-18!83;UBERON:0002329!2.04e-18!83;UBERON:0003077!2.04e-18!83;UBERON:0003059!2.04e-18!83;UBERON:0007282!2.04e-18!83;UBERON:0009618!2.04e-18!83;UBERON:0007285!2.04e-18!83;UBERON:0000119!1.00e-16!312;UBERON:0000486!1.20e-16!82;UBERON:0000483!1.61e-16!309;UBERON:0004290!3.88e-14!70;UBERON:0000033!6.40e-13!123;UBERON:0001637!8.83e-13!42;UBERON:0003509!8.83e-13!42;UBERON:0004572!8.83e-13!42;UBERON:0001134!2.93e-12!61;UBERON:0002036!2.93e-12!61;UBERON:0003082!2.93e-12!61;UBERON:0000153!2.97e-12!129;UBERON:0007811!2.97e-12!129;UBERON:0000481!3.36e-12!347;UBERON:0002385!9.33e-12!63;UBERON:0001015!9.33e-12!63;UBERON:0000383!9.33e-12!63;UBERON:0000467!3.15e-11!625;UBERON:0000468!3.37e-11!659;UBERON:0000480!4.49e-11!626;UBERON:0005256!9.91e-11!143;UBERON:0004872!3.57e-10!84;UBERON:0000924!3.73e-10!173;UBERON:0006601!3.73e-10!173;UBERON:0004573!4.28e-10!33;UBERON:0004571!4.28e-10!33;UBERON:0002049!5.80e-10!79;UBERON:0007798!5.80e-10!79;UBERON:0000477!6.51e-10!286;UBERON:0004121!6.71e-10!169;UBERON:0003102!8.28e-10!95;UBERON:0001981!1.02e-09!60;UBERON:0007500!1.02e-09!60;UBERON:0004537!1.02e-09!60;UBERON:0006965!1.02e-09!60;UBERON:0000025!7.00e-09!194;UBERON:0004111!8.70e-09!241;UBERON:0002097!1.45e-08!40;UBERON:0002199!3.18e-08!45;UBERON:0002416!3.18e-08!45;UBERON:0000055!5.83e-08!69;UBERON:0000922!1.02e-07!612;UBERON:0002616!1.11e-07!59;UBERON:0000923!1.17e-07!604;UBERON:0005291!1.17e-07!604;UBERON:0006598!1.17e-07!604;UBERON:0002532!1.17e-07!604;UBERON:0002346!1.23e-07!90;UBERON:0000955!1.36e-07!69;UBERON:0006238!1.36e-07!69;UBERON:0002050!1.57e-07!605;UBERON:0005423!1.57e-07!605;UBERON:0003075!2.00e-07!86;UBERON:0007284!2.00e-07!86;UBERON:0004237!2.75e-07!10;UBERON:0004695!2.75e-07!10;UBERON:0002111!2.75e-07!10;UBERON:0004178!2.75e-07!10;UBERON:0001049!9.15e-07!57;UBERON:0005068!9.15e-07!57;UBERON:0006241!9.15e-07!57;UBERON:0007135!9.15e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.76e-09;33!UBERON:0004571;1.76e-09;33!UBERON:0011137;5.98e-09;11!UBERON:0010323;5.98e-09;11!UBERON:0004237;6.89e-09;10!UBERON:0004695;6.89e-09;10!UBERON:0002111;6.89e-09;10!UBERON:0004178;6.89e-09;10!UBERON:0001637;2.50e-08;42!UBERON:0003509;2.50e-08;42!UBERON:0004572;2.50e-08;42 | |||
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| ||
|short_description=p5@NTM | |short_description=p5@NTM | ||
}} | }} |
Latest revision as of 19:04, 16 September 2015
Short description: | p5@NTM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NTM_5end |
Coexpression cluster: | C2112_Smooth_Amniotic_mesenchymal_Myoblast_Fibroblast_Lens_cerebellum |
Association with transcript: | -80bp_to_ENST00000479431_5end |
EntrezGene: | NTM |
HGNC: | 17941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.24e-18 | 76 |
vascular associated smooth muscle cell | 4.13e-15 | 32 |
smooth muscle cell | 1.37e-12 | 43 |
smooth muscle myoblast | 1.37e-12 | 43 |
muscle precursor cell | 4.33e-12 | 58 |
myoblast | 4.33e-12 | 58 |
multi-potent skeletal muscle stem cell | 4.33e-12 | 58 |
muscle cell | 1.28e-10 | 55 |
aortic smooth muscle cell | 1.16e-08 | 10 |
electrically responsive cell | 1.21e-08 | 61 |
electrically active cell | 1.21e-08 | 61 |
preadipocyte | 3.47e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.71e-10 | 14 |