FFCP PHASE1:Hg19::chr11:16629182..16629201,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55553 | |EntrezGene=55553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16421 | |HGNC=16421 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=72bp_to_ENST00000525835_5end | |association_with_transcript=72bp_to_ENST00000525835_5end | ||
|cluster_id=chr11:16629182..16629201,- | |||
|description=CAGE_peak_10_at_SOX6_5end | |description=CAGE_peak_10_at_SOX6_5end | ||
|id=chr11:16629182..16629201,- | |id=chr11:16629182..16629201,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;4.61e-14;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;9.00e-08;4!UBERON:0007284;9.00e-08;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.43e-33!115;UBERON:0001049!1.49e-29!57;UBERON:0005068!1.49e-29!57;UBERON:0006241!1.49e-29!57;UBERON:0007135!1.49e-29!57;UBERON:0001017!1.83e-29!82;UBERON:0005743!2.08e-28!86;UBERON:0002346!1.33e-27!90;UBERON:0003080!2.08e-26!42;UBERON:0002780!2.44e-25!41;UBERON:0001890!2.44e-25!41;UBERON:0006240!2.44e-25!41;UBERON:0000073!4.33e-25!94;UBERON:0001016!4.33e-25!94;UBERON:0003075!8.59e-24!86;UBERON:0007284!8.59e-24!86;UBERON:0000955!1.22e-23!69;UBERON:0006238!1.22e-23!69;UBERON:0002616!4.80e-23!59;UBERON:0000924!1.18e-22!173;UBERON:0006601!1.18e-22!173;UBERON:0001893!2.48e-20!34;UBERON:0002020!3.94e-20!34;UBERON:0003528!3.94e-20!34;UBERON:0001869!4.01e-20!32;UBERON:0004121!9.59e-20!169;UBERON:0002791!2.31e-19!33;UBERON:0000153!1.16e-18!129;UBERON:0007811!1.16e-18!129;UBERON:0000033!1.06e-16!123;UBERON:0003056!1.10e-16!61;UBERON:0000956!3.88e-15!25;UBERON:0000203!3.88e-15!25;UBERON:0001950!8.10e-14!20;UBERON:0002619!3.76e-12!22;UBERON:0000922!2.23e-11!612;UBERON:0002050!7.80e-11!605;UBERON:0005423!7.80e-11!605;UBERON:0000481!7.98e-11!347;UBERON:0000475!1.44e-10!365;UBERON:0000468!1.47e-10!659;UBERON:0000923!2.07e-10!604;UBERON:0005291!2.07e-10!604;UBERON:0006598!2.07e-10!604;UBERON:0002532!2.07e-10!604;UBERON:0000062!9.35e-09!511;UBERON:0000025!1.04e-08!194;UBERON:0000483!2.10e-08!309;UBERON:0000119!4.04e-08!312;UBERON:0000467!5.66e-08!625;UBERON:0000480!6.69e-08!626;UBERON:0004111!1.57e-07!241;UBERON:0000477!3.15e-07!286;UBERON:0001871!6.06e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!9.43e-33!115;UBERON:0001049!1.49e-29!57;UBERON:0005068!1.49e-29!57;UBERON:0006241!1.49e-29!57;UBERON:0007135!1.49e-29!57;UBERON:0001017!1.83e-29!82;UBERON:0005743!2.08e-28!86;UBERON:0002346!1.33e-27!90;UBERON:0003080!2.08e-26!42;UBERON:0002780!2.44e-25!41;UBERON:0001890!2.44e-25!41;UBERON:0006240!2.44e-25!41;UBERON:0000073!4.33e-25!94;UBERON:0001016!4.33e-25!94;UBERON:0003075!8.59e-24!86;UBERON:0007284!8.59e-24!86;UBERON:0000955!1.22e-23!69;UBERON:0006238!1.22e-23!69;UBERON:0002616!4.80e-23!59;UBERON:0000924!1.18e-22!173;UBERON:0006601!1.18e-22!173;UBERON:0001893!2.48e-20!34;UBERON:0002020!3.94e-20!34;UBERON:0003528!3.94e-20!34;UBERON:0001869!4.01e-20!32;UBERON:0004121!9.59e-20!169;UBERON:0002791!2.31e-19!33;UBERON:0000153!1.16e-18!129;UBERON:0007811!1.16e-18!129;UBERON:0000033!1.06e-16!123;UBERON:0003056!1.10e-16!61;UBERON:0000956!3.88e-15!25;UBERON:0000203!3.88e-15!25;UBERON:0001950!8.10e-14!20;UBERON:0002619!3.76e-12!22;UBERON:0000922!2.23e-11!612;UBERON:0002050!7.80e-11!605;UBERON:0005423!7.80e-11!605;UBERON:0000481!7.98e-11!347;UBERON:0000475!1.44e-10!365;UBERON:0000468!1.47e-10!659;UBERON:0000923!2.07e-10!604;UBERON:0005291!2.07e-10!604;UBERON:0006598!2.07e-10!604;UBERON:0002532!2.07e-10!604;UBERON:0000062!9.35e-09!511;UBERON:0000025!1.04e-08!194;UBERON:0000483!2.10e-08!309;UBERON:0000119!4.04e-08!312;UBERON:0000467!5.66e-08!625;UBERON:0000480!6.69e-08!626;UBERON:0004111!1.57e-07!241;UBERON:0000477!3.15e-07!286;UBERON:0001871!6.06e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.55e-15;49!UBERON:0002133;1.11e-14;2!UBERON:0000341;1.62e-14;2!UBERON:0002114;3.11e-10;2!UBERON:0003978;4.37e-10;3!UBERON:0000946;4.37e-10;3!UBERON:0002426;2.19e-08;1!UBERON:0003831;2.19e-08;1!UBERON:0003898;2.19e-08;1!UBERON:0004830;2.19e-08;1!UBERON:0003830;2.19e-08;1!UBERON:0005175;2.19e-08;1!UBERON:0001774;2.19e-08;1!UBERON:0001103;2.19e-08;1!UBERON:0002135;3.45e-08;1!UBERON:0002134;3.45e-08;1!UBERON:0005208;3.45e-08;1!UBERON:0004145;3.45e-08;1!UBERON:0005946;3.45e-08;1!UBERON:0005965;3.45e-08;1!UBERON:0002078;3.45e-08;1!UBERON:0007029;7.09e-08;1!UBERON:0000996;7.09e-08;1!UBERON:0002346;1.16e-07;4!UBERON:0000923;1.16e-07;4!UBERON:0010316;1.16e-07;4!UBERON:0005291;1.16e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,1.12e-14,2;UBERON:0000341,2.89e-14,2;UBERON:0002114,3.19e-10,2;UBERON:0003978,4.38e-10,3;UBERON:0009751,4.38e-10,3;UBERON:0000946,4.38e-10,3;UBERON:0002523,4.38e-10,3;UBERON:0005983,4.38e-10,3;UBERON:0002165,4.38e-10,3;UBERON:0002062,4.38e-10,3;UBERON:0007280,4.38e-10,3;UBERON:0002426,2.19e-08,1;UBERON:0003831,2.19e-08,1;UBERON:0003898,2.19e-08,1;UBERON:0004830,2.19e-08,1;UBERON:0003830,2.19e-08,1;UBERON:0005175,2.19e-08,1;UBERON:0001774,2.19e-08,1;UBERON:0001103,2.19e-08,1;UBERON:0010084,2.19e-08,1;UBERON:0002134,3.11e-08,1;UBERON:0005208,3.11e-08,1;UBERON:0005946,3.11e-08,1;UBERON:0005965,3.11e-08,1;UBERON:0002078,3.11e-08,1;UBERON:0002135,3.83e-08,1;UBERON:0007029,6.63e-08,1;UBERON:0000996,7.10e-08,1;UBERON:0001017,9.65e-08,81;UBERON:0002346,2.09e-07,86;UBERON:0001016,8.44e-07,89 | |||
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| ||
|short_description=p10@SOX6 | |short_description=p10@SOX6 | ||
}} | }} |
Latest revision as of 23:11, 16 September 2015
Short description: | p10@SOX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SOX6_5end |
Coexpression cluster: | NA |
Association with transcript: | 72bp_to_ENST00000525835_5end |
EntrezGene: | SOX6 |
HGNC: | 16421 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 1.12e-14 | 2 |
throat | 2.89e-14 | 2 |
duodenum | 3.19e-10 | 2 |
valve | 4.38e-10 | 3 |
cardiac mesenchyme | 4.38e-10 | 3 |
cardial valve | 4.38e-10 | 3 |
tunica intima | 4.38e-10 | 3 |
heart layer | 4.38e-10 | 3 |
endocardium | 4.38e-10 | 3 |
endocardial cushion | 4.38e-10 | 3 |
presumptive endocardium | 4.38e-10 | 3 |
chest muscle | 2.19e-08 | 1 |
respiratory system muscle | 2.19e-08 | 1 |
skeletal muscle of trunk | 2.19e-08 | 1 |
respiratory system skeletal muscle | 2.19e-08 | 1 |
thoracic segment muscle | 2.19e-08 | 1 |
chest organ | 2.19e-08 | 1 |
muscle of trunk | 2.19e-08 | 1 |
diaphragm | 2.19e-08 | 1 |
future diaphragm | 2.19e-08 | 1 |
tricuspid valve | 3.11e-08 | 1 |
right atrium valve | 3.11e-08 | 1 |
outflow tract of atrium | 3.11e-08 | 1 |
outflow part of right atrium | 3.11e-08 | 1 |
right cardiac atrium | 3.11e-08 | 1 |
mitral valve | 3.83e-08 | 1 |
surface | 6.63e-08 | 1 |
vagina | 7.10e-08 | 1 |
central nervous system | 9.65e-08 | 81 |
neurectoderm | 2.09e-07 | 86 |
nervous system | 8.44e-07 | 89 |