FFCP PHASE1:Hg19::chr10:126432640..126432663,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:126432640..126432663,-
|short_description=p4@FAM53B
|description=CAGE_peak_4_at_FAM53B_5end
|association_with_transcript=-21bp_to_ENST00000337318_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9679 | |EntrezGene=9679 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28968 | |HGNC=28968 | ||
|TSSclassifier=strong | |||
|UniProt=Q14153 | |UniProt=Q14153 | ||
|association_with_transcript=-21bp_to_ENST00000337318_5end | |||
|cluster_id=chr10:126432640..126432663,- | |||
|coexpression_cluster_id=C123 | |||
|description=CAGE_peak_4_at_FAM53B_5end | |||
|id=chr10:126432640..126432663,- | |||
|ontology_enrichment_celltype=CL:0000037!4.69e-29!172;CL:0000566!4.69e-29!172;CL:0000738!1.13e-27!140;CL:0000988!7.17e-27!182;CL:0002032!7.51e-27!165;CL:0000837!7.51e-27!165;CL:0002031!2.68e-20!124;CL:0002087!3.08e-20!119;CL:0000542!4.02e-16!53;CL:0000051!4.02e-16!53;CL:0000838!5.43e-16!52;CL:0000763!7.35e-12!112;CL:0000049!7.35e-12!112;CL:0000791!1.38e-10!18;CL:0000789!1.38e-10!18;CL:0002420!1.38e-10!18;CL:0002419!1.38e-10!18;CL:0000790!1.38e-10!18;CL:0000084!4.83e-09!25;CL:0000827!4.83e-09!25;CL:0000766!5.49e-09!76;CL:0000625!3.00e-08!11;CL:0000557!1.49e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.18e-15;18!CL:0000789;2.18e-15;18!CL:0002419;2.18e-15;18!CL:0000084;1.50e-13;25!CL:0000542;5.40e-13;53!CL:0000625;5.06e-12;11!CL:0000236;1.59e-08;13!CL:0000945;2.73e-07;24!CL:0002087;4.67e-07;104!CL:0000738;5.25e-07;136!CL:0000094;7.29e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.91e-32,136;CL:0000037,7.58e-31,168;CL:0000988,3.26e-28,177;CL:0002032,4.88e-28,161;CL:0000837,4.88e-28,161;CL:0002031,2.92e-24,120;CL:0002087,1.60e-23,115;CL:0000838,4.25e-22,52;CL:0000542,2.18e-21,53;CL:0000051,2.18e-21,53;CL:0000791,1.45e-15,18;CL:0000789,1.45e-15,18;CL:0002420,1.45e-15,18;CL:0002419,1.45e-15,18;CL:0000790,1.45e-15,18;CL:0000084,1.61e-13,25;CL:0000827,1.61e-13,25;CL:0000625,4.37e-12,11;CL:0000763,7.55e-10,108;CL:0000049,7.55e-10,108;CL:0000766,2.64e-09,72;CL:0002393,4.84e-08,9;CL:0002397,4.84e-08,9;CL:0000236,7.43e-08,14;CL:0000945,1.75e-07,24;CL:0000826,1.75e-07,24;CL:0000557,4.28e-07,67;CL:0000094,7.39e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;2.18e-15;18!CL:0000051;5.40e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.47e-16!115;UBERON:0002390!4.26e-11!102;UBERON:0003061!4.26e-11!102;UBERON:0002193!6.04e-10!112;UBERON:0001893!6.45e-08!34;UBERON:0002791!1.24e-07!33;UBERON:0001049!2.18e-07!57;UBERON:0005068!2.18e-07!57;UBERON:0006241!2.18e-07!57;UBERON:0007135!2.18e-07!57;UBERON:0002020!2.91e-07!34;UBERON:0003528!2.91e-07!34;UBERON:0001869!3.18e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.13e-08;15!UBERON:0000179;2.13e-08;15!UBERON:0000463;2.13e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.73e-13,98;UBERON:0003061,9.73e-13,98;UBERON:0002193,1.50e-11,108;UBERON:0007023,2.41e-11,114;UBERON:0000178,2.41e-08,15;UBERON:0000179,2.41e-08,15;UBERON:0000463,2.41e-08,15;UBERON:0001893,3.52e-07,34;UBERON:0001950,4.86e-07,20;UBERON:0002405,7.83e-07,93 | |||
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| ||
|short_description=p4@FAM53B | |||
}} | }} |
Latest revision as of 22:41, 16 September 2015
Short description: | p4@FAM53B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM53B_5end |
Coexpression cluster: | C123_CD19_Natural_CD8_CD4_CD14_Peripheral_Basophils |
Association with transcript: | -21bp_to_ENST00000337318_5end |
EntrezGene: | FAM53B |
HGNC: | 28968 |
UniProt: | Q14153 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.91e-32 | 136 |
hematopoietic stem cell | 7.58e-31 | 168 |
hematopoietic cell | 3.26e-28 | 177 |
hematopoietic oligopotent progenitor cell | 4.88e-28 | 161 |
hematopoietic multipotent progenitor cell | 4.88e-28 | 161 |
hematopoietic lineage restricted progenitor cell | 2.92e-24 | 120 |
nongranular leukocyte | 1.60e-23 | 115 |
lymphoid lineage restricted progenitor cell | 4.25e-22 | 52 |
lymphocyte | 2.18e-21 | 53 |
common lymphoid progenitor | 2.18e-21 | 53 |
mature alpha-beta T cell | 1.45e-15 | 18 |
alpha-beta T cell | 1.45e-15 | 18 |
immature T cell | 1.45e-15 | 18 |
mature T cell | 1.45e-15 | 18 |
immature alpha-beta T cell | 1.45e-15 | 18 |
T cell | 1.61e-13 | 25 |
pro-T cell | 1.61e-13 | 25 |
CD8-positive, alpha-beta T cell | 4.37e-12 | 11 |
myeloid cell | 7.55e-10 | 108 |
common myeloid progenitor | 7.55e-10 | 108 |
myeloid leukocyte | 2.64e-09 | 72 |
intermediate monocyte | 4.84e-08 | 9 |
CD14-positive, CD16-positive monocyte | 4.84e-08 | 9 |
B cell | 7.43e-08 | 14 |
lymphocyte of B lineage | 1.75e-07 | 24 |
pro-B cell | 1.75e-07 | 24 |
granulocyte monocyte progenitor cell | 4.28e-07 | 67 |
granulocyte | 7.39e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.73e-13 | 98 |
blood island | 9.73e-13 | 98 |
hemolymphoid system | 1.50e-11 | 108 |
adult organism | 2.41e-11 | 114 |
blood | 2.41e-08 | 15 |
haemolymphatic fluid | 2.41e-08 | 15 |
organism substance | 2.41e-08 | 15 |
telencephalon | 3.52e-07 | 34 |
neocortex | 4.86e-07 | 20 |
immune system | 7.83e-07 | 93 |