FFCP PHASE1:Hg19::chr11:46299186..46299195,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90993 | |EntrezGene=90993 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18856 | |HGNC=18856 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000529193_5end | |association_with_transcript=-16bp_to_ENST00000529193_5end | ||
|cluster_id=chr11:46299186..46299195,+ | |||
|coexpression_cluster_id=C2133 | |||
|description=CAGE_peak_3_at_CREB3L1_5end | |description=CAGE_peak_3_at_CREB3L1_5end | ||
|id=chr11:46299186..46299195,+ | |id=chr11:46299186..46299195,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.01e-41!180;CL:0000183!2.86e-21!59;CL:0000057!4.63e-21!75;CL:0000680!7.47e-21!57;CL:0000056!7.47e-21!57;CL:0000355!7.47e-21!57;CL:0000187!2.49e-20!54;CL:0000192!6.39e-20!42;CL:0000514!6.39e-20!42;CL:0000393!1.57e-17!60;CL:0000211!1.57e-17!60;CL:0000359!1.81e-14!32;CL:0000222!3.74e-11!119;CL:0002620!1.87e-07!23;CL:0000048!3.97e-07!430 | |ontology_enrichment_celltype=CL:0000055!5.01e-41!180;CL:0000183!2.86e-21!59;CL:0000057!4.63e-21!75;CL:0000680!7.47e-21!57;CL:0000056!7.47e-21!57;CL:0000355!7.47e-21!57;CL:0000187!2.49e-20!54;CL:0000192!6.39e-20!42;CL:0000514!6.39e-20!42;CL:0000393!1.57e-17!60;CL:0000211!1.57e-17!60;CL:0000359!1.81e-14!32;CL:0000222!3.74e-11!119;CL:0002620!1.87e-07!23;CL:0000048!3.97e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000192;1.43e-17;43!CL:0000359;3.02e-16;32!CL:0000187;1.44e-14;55!CL:0000393;1.06e-11;61!CL:0000211;1.06e-11;61!CL:0000134;3.62e-09;55!CL:0000057;7.81e-09;73!CL:0000723;1.26e-08;61!CL:0000048;3.08e-08;58!CL:0002320;3.43e-08;188!CL:0002334;1.91e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.34e-27,58;CL:0000056,2.34e-27,58;CL:0000355,2.34e-27,58;CL:0000187,1.23e-26,55;CL:0000192,5.48e-25,43;CL:0000514,5.48e-25,43;CL:0000057,1.95e-22,76;CL:0000393,3.50e-22,61;CL:0000211,3.50e-22,61;CL:0000048,8.96e-19,427;CL:0000723,8.66e-18,433;CL:0000359,3.03e-17,32;CL:0000034,1.57e-16,441;CL:0000222,9.53e-13,121;CL:0002334,1.65e-07,12;CL:0002320,8.24e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000514;1.43e-17;43!CL:0000355;3.07e-14;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.27e-22!83;UBERON:0002329!5.27e-22!83;UBERON:0003077!5.27e-22!83;UBERON:0003059!5.27e-22!83;UBERON:0007282!5.27e-22!83;UBERON:0009618!5.27e-22!83;UBERON:0007285!5.27e-22!83;UBERON:0004290!4.40e-20!70;UBERON:0002385!1.86e-18!63;UBERON:0001015!1.86e-18!63;UBERON:0000383!1.86e-18!63;UBERON:0005256!1.93e-18!143;UBERON:0001134!2.64e-18!61;UBERON:0002036!2.64e-18!61;UBERON:0003082!2.64e-18!61;UBERON:0000486!1.17e-16!82;UBERON:0000475!1.70e-11!365;UBERON:0002100!4.29e-11!216;UBERON:0001637!9.21e-10!42;UBERON:0003509!9.21e-10!42;UBERON:0004572!9.21e-10!42;UBERON:0000481!1.59e-09!347;UBERON:0003104!5.42e-09!238;UBERON:0009142!5.42e-09!238;UBERON:0000490!5.59e-09!138;UBERON:0002049!1.01e-08!79;UBERON:0007798!1.01e-08!79;UBERON:0004872!2.28e-08!84;UBERON:0003102!3.01e-08!95;UBERON:0004573!7.11e-08!33;UBERON:0004571!7.11e-08!33;UBERON:0001135!8.18e-07!15 | |ontology_enrichment_uberon=UBERON:0000914!5.27e-22!83;UBERON:0002329!5.27e-22!83;UBERON:0003077!5.27e-22!83;UBERON:0003059!5.27e-22!83;UBERON:0007282!5.27e-22!83;UBERON:0009618!5.27e-22!83;UBERON:0007285!5.27e-22!83;UBERON:0004290!4.40e-20!70;UBERON:0002385!1.86e-18!63;UBERON:0001015!1.86e-18!63;UBERON:0000383!1.86e-18!63;UBERON:0005256!1.93e-18!143;UBERON:0001134!2.64e-18!61;UBERON:0002036!2.64e-18!61;UBERON:0003082!2.64e-18!61;UBERON:0000486!1.17e-16!82;UBERON:0000475!1.70e-11!365;UBERON:0002100!4.29e-11!216;UBERON:0001637!9.21e-10!42;UBERON:0003509!9.21e-10!42;UBERON:0004572!9.21e-10!42;UBERON:0000481!1.59e-09!347;UBERON:0003104!5.42e-09!238;UBERON:0009142!5.42e-09!238;UBERON:0000490!5.59e-09!138;UBERON:0002049!1.01e-08!79;UBERON:0007798!1.01e-08!79;UBERON:0004872!2.28e-08!84;UBERON:0003102!3.01e-08!95;UBERON:0004573!7.11e-08!33;UBERON:0004571!7.11e-08!33;UBERON:0001135!8.18e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.13e-07;33!UBERON:0004571;2.13e-07;33!UBERON:0002385;5.65e-07;31!UBERON:0001015;5.65e-07;31!UBERON:0000383;5.65e-07;31!UBERON:0002384;6.11e-07;198!UBERON:0001637;9.41e-07;42!UBERON:0003509;9.41e-07;42!UBERON:0004572;9.41e-07;42 | |||
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| ||
|short_description=p3@CREB3L1 | |short_description=p3@CREB3L1 | ||
}} | }} |
Latest revision as of 02:05, 18 September 2015
Short description: | p3@CREB3L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CREB3L1_5end |
Coexpression cluster: | C2133_Mesenchymal_Fibroblast_Smooth_osteoclastoma_Osteoblast_Prostate_leiomyoma |
Association with transcript: | -16bp_to_ENST00000529193_5end |
EntrezGene: | CREB3L1 |
HGNC: | 18856 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.34e-27 | 58 |
myoblast | 2.34e-27 | 58 |
multi-potent skeletal muscle stem cell | 2.34e-27 | 58 |
muscle cell | 1.23e-26 | 55 |
smooth muscle cell | 5.48e-25 | 43 |
smooth muscle myoblast | 5.48e-25 | 43 |
fibroblast | 1.95e-22 | 76 |
electrically responsive cell | 3.50e-22 | 61 |
electrically active cell | 3.50e-22 | 61 |
multi fate stem cell | 8.96e-19 | 427 |
somatic stem cell | 8.66e-18 | 433 |
vascular associated smooth muscle cell | 3.03e-17 | 32 |
stem cell | 1.57e-16 | 441 |
mesodermal cell | 9.53e-13 | 121 |
preadipocyte | 1.65e-07 | 12 |
connective tissue cell | 8.24e-07 | 361 |