FFCP PHASE1:Hg19::chr10:23727966..23727986,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:23727966..23727986,+
|short_description=p6@OTUD1
|description=CAGE_peak_6_at_OTUD1_5end
|association_with_transcript=-211bp_to_ENST00000376495,NM_00114537...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=220213 | |EntrezGene=220213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27346 | |HGNC=27346 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VV17 | |UniProt=Q5VV17 | ||
|association_with_transcript=-211bp_to_ENST00000376495,NM_001145373,uc001irr.1_5end | |||
|cluster_id=chr10:23727966..23727986,+ | |||
|description=CAGE_peak_6_at_OTUD1_5end | |||
|id=chr10:23727966..23727986,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.49e-17!140;CL:0002031!7.95e-13!124;CL:0002087!1.15e-11!119;CL:0000037!2.56e-09!172;CL:0000566!2.56e-09!172;CL:0000766!4.65e-09!76;CL:0000791!2.72e-08!18;CL:0000789!2.72e-08!18;CL:0002420!2.72e-08!18;CL:0002419!2.72e-08!18;CL:0000790!2.72e-08!18;CL:0000988!3.44e-08!182;CL:0002057!4.13e-08!42;CL:0002032!1.52e-07!165;CL:0000837!1.52e-07!165;CL:0000557!1.53e-07!71;CL:0000860!2.12e-07!45;CL:0000839!6.40e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.70e-13;18!CL:0000789;1.70e-13;18!CL:0002419;1.70e-13;18!CL:0000624;3.15e-11;6!CL:0000084;1.11e-08;25!CL:0000094;2.61e-07;8!CL:0000542;4.09e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.09e-19,136;CL:0000791,9.40e-14,18;CL:0000789,9.40e-14,18;CL:0002420,9.40e-14,18;CL:0002419,9.40e-14,18;CL:0000790,9.40e-14,18;CL:0000037,1.76e-13,168;CL:0002031,3.60e-13,120;CL:0002087,2.13e-12,115;CL:0000838,2.82e-12,52;CL:0000988,4.89e-12,177;CL:0000542,6.58e-12,53;CL:0000051,6.58e-12,53;CL:0002032,1.66e-11,161;CL:0000837,1.66e-11,161;CL:0000624,3.58e-11,6;CL:0000084,7.47e-09,25;CL:0000827,7.47e-09,25;CL:0000094,1.41e-07,8;CL:0000766,2.22e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000790;1.70e-13;18!CL:0000051;4.09e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.16e-16!115;UBERON:0002390!1.71e-08!102;UBERON:0003061!1.71e-08!102;UBERON:0002193!5.50e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.82e-11,114 | |||
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|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0.791300934685361,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,0.786728553697808,1.91914699048606,1.39334510984468,0,0,0,0,0,0.880801318004542,0.553995408531877,3.40925560699241,2.17010870715852,0.447830948479849,0.32389366601898,0.257575567634187,0.581592955118259,0.377875943688809,0.242584061187816,0.464858073811369,0.822335776043652,0.309706370895104,0.575384784644301,0.512321413058201,0,1.03423704220986,0.645484683583826,0,0.752969358170419,1.36453075028923,0.224723484445085,0.612167784741805,0.320929027076094,1.27867425159808,0,0.398927315243264,0.426224750532694,1.16083695451434,1.70215567407342,0.622822248995575,0.251248665256743,2.08593167368081,0.65156653411535,0.605399502633369,0.368277635987565,0.316462387440884,1.26753171787165,1.06302149982522,0.628975936525128,0.786300418025466,1.05123824989054,1.28580469357664,1.14005097496499,0.39783335439818,0.91332076882317,1.75996244461323,0.546138611262131,3.55803701545422,1.28019066769952,1.20118796110804,0,1.32208974556972,0.954053754535364,3.98449078376614,3.52342313622563,1.52909291250092,1.32171328579026,0.560508562981536,1.31692042387539,3.14735632182133,4.71612915298998,3.28962398399215,0.83593247695339,4.88883399950386,1.4203434172042,3.89653456815823,0.891283655081389,3.82987679717288,1.32920336750173,1.62482318259009,1.15282187753108,0.650296737799391,0.822189523018381,1.10540007114339,0.869409257205157,4.00373720537563,4.81573490561484,1.04535523804977,0.113309342697566,3.44898444241729,2.40539211837841,1.51811815211702,2.86708872891687,1.30216690771284,0.950452044448374,0.903450714466637,1.4078527226986,0,1.4206635122641,0.821127996921047,3.02410114837099,1.87208137048455,5.50332734754636,0,0,0.383587685530591,0,0,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.175669571386252,1.44076983047484,0.728590576585084,0,0,0.174129737299267,0.26591592103773,1.90792499444274,1.71598473234038,1.48583000531826,0.198762407366705,0,0,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0.33472061276467,0,0.760272105718513,0.24406205754817,0.367663080345869,1.62028389576352,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.183201743930407,5.27121669744253,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,1.06400514659507,0.560677600142307,0,0,0,0.134710672069688,0,0,0.576175924479999,0.468642863667593,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.751190294532984,0.113432183160021,0,0.213557388818567,0,0,0.515262646192195,0.257640540045629,0.18611685633159,0,0.389748020644795,0,0.184099797284599,0.161646056818812,0.355009592516614,0.10075209822764,0,0.386521706326594,0.272746120590835,0,0.487894824518382,0.265059536642971,0.232387885739037,0.310983165046111,0.504641701751257,0,0,0.643240938192885,1.38134921352481,0,0,0,0.168584690078102,0.241011029883482,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0,0.790204397959275,0.858486162094873,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,1.32072651019839,4.35389042635621,4.75595846275973,5.42842463733434,0.190493682876507,0,0,0,0.411309970813294,0.300343057843917,0,0,0,0,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0.904318131178758,0,0.699810938274399,1.2162378064119,1.50677127429638,0,0,0,0,0,0.205476322550383,0.179060963239896,0,3.94061520403854,3.45004119775228,2.43851768931522,0.254094624222463,0,0,0.837581326671744,0,2.24702107184155,5.9832291840805,2.48649308061621,0,0,0,0.623912584592421,0.356857977594324,0.788512075169673,0.468565659970853,0,2.27407504055985,0,0,0,0.260650843404249,0.195801157462741,0.343143423810856,0.82707210449155,3.66714141391649,3.41528184971022,0,0,0.30239029332968,0.496215615637554,0.153461973288062,0.561320188866147,0.256278298511402,0,0.160853921143607,0,0,0.355123450626254,0,0,0.232420756919918,0.120859449591622,0,0.276242966807689,0.229628896329213,0,0.393373244878272,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0.501689773854853,0,0.831076008928724,0,0.438519753291869,0.261435451024901,0.256450125116389,0.328014645699706,0.650756789328606,0.618246069886334,0,0.082509499920588,0,0,0,0.580024309752732,0,0,0,0.214840489736547,0.145016693914229,0,0.356128142586949,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,1.116475108079,0.316379424718726,0.190630193923825,0,0,0.95460974377781,0,0.359744915166629,0.274537029736055,0,0,0,0,0,0.243713489631284,1.05650146756755,0,0.424216295861138,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0,0.286822704408103,0.0982490410131212,0.35667105148125,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,0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| ||
|short_description=p6@OTUD1 | |||
}} | }} |
Latest revision as of 15:44, 17 September 2015
Short description: | p6@OTUD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_OTUD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -211bp_to_ENST00000376495, NM_001145373, uc001irr.1_5end |
EntrezGene: | OTUD1 |
HGNC: | 27346 |
UniProt: | Q5VV17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.09e-19 | 136 |
mature alpha-beta T cell | 9.40e-14 | 18 |
alpha-beta T cell | 9.40e-14 | 18 |
immature T cell | 9.40e-14 | 18 |
mature T cell | 9.40e-14 | 18 |
immature alpha-beta T cell | 9.40e-14 | 18 |
hematopoietic stem cell | 1.76e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 3.60e-13 | 120 |
nongranular leukocyte | 2.13e-12 | 115 |
lymphoid lineage restricted progenitor cell | 2.82e-12 | 52 |
hematopoietic cell | 4.89e-12 | 177 |
lymphocyte | 6.58e-12 | 53 |
common lymphoid progenitor | 6.58e-12 | 53 |
hematopoietic oligopotent progenitor cell | 1.66e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-11 | 161 |
CD4-positive, alpha-beta T cell | 3.58e-11 | 6 |
T cell | 7.47e-09 | 25 |
pro-T cell | 7.47e-09 | 25 |
granulocyte | 1.41e-07 | 8 |
myeloid leukocyte | 2.22e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.82e-11 | 114 |