FFCP PHASE1:Hg19::chr10:27026938..27026954,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:27026938..27026954,+
|short_description=p@chr10:27026938..27026954,+
|description=CAGE_peak_at_chr10:27026938..27026954,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:27026938..27026954,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:27026938..27026954,+ | |||
|id=chr10:27026938..27026954,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.19e-61!42;CL:0000860!2.46e-56!45;CL:0002194!8.80e-44!63;CL:0000576!8.80e-44!63;CL:0000040!8.80e-44!63;CL:0000559!8.80e-44!63;CL:0002009!3.17e-42!65;CL:0000766!1.10e-40!76;CL:0000839!1.01e-38!70;CL:0000557!4.45e-38!71;CL:0000738!6.23e-34!140;CL:0002087!1.24e-32!119;CL:0000763!5.67e-29!112;CL:0000049!5.67e-29!112;CL:0000037!1.75e-27!172;CL:0000566!1.75e-27!172;CL:0002031!3.90e-27!124;CL:0002032!1.09e-25!165;CL:0000837!1.09e-25!165;CL:0000988!1.88e-25!182;CL:0002393!1.35e-14!9;CL:0002397!1.35e-14!9;CL:0000134!1.66e-10!358;CL:0002320!4.07e-10!365;CL:0000219!9.61e-09!390;CL:0000034!8.47e-08!444;CL:0000048!1.03e-07!430;CL:0000723!1.80e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.11e-51;33!CL:0002057;2.11e-51;33!CL:0000473;3.25e-41;39!CL:0000234;3.25e-41;39!CL:0000576;7.79e-29;48!CL:0000766;4.98e-21;69!CL:0002087;2.93e-12;104!CL:0002393;9.26e-10;6!CL:0002397;9.26e-10;6!CL:0000763;9.28e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.62e-60,48;CL:0000234,2.62e-60,48;CL:0000860,3.62e-60,42;CL:0002057,3.62e-60,42;CL:0002194,5.30e-48,59;CL:0000576,5.30e-48,59;CL:0000040,5.30e-48,59;CL:0000559,5.30e-48,59;CL:0002009,2.06e-46,61;CL:0000839,7.44e-43,66;CL:0000557,3.32e-42,67;CL:0000766,3.16e-39,72;CL:0000763,7.99e-26,108;CL:0000049,7.99e-26,108;CL:0002087,3.52e-24,115;CL:0002031,4.02e-23,120;CL:0000738,2.98e-20,136;CL:0002032,6.76e-17,161;CL:0000837,6.76e-17,161;CL:0000037,3.92e-16,168;CL:0000988,3.07e-15,177;CL:0002393,8.34e-07,9;CL:0002397,8.34e-07,9;CL:0000134,8.46e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;5.03e-37;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.77e-35!80;UBERON:0001474!1.69e-32!86;UBERON:0002390!2.60e-28!102;UBERON:0003061!2.60e-28!102;UBERON:0004765!1.37e-26!101;UBERON:0001434!1.37e-26!101;UBERON:0002193!4.14e-25!112;UBERON:0002405!1.85e-22!115;UBERON:0002204!2.70e-14!167;UBERON:0003081!2.56e-10!216;UBERON:0002384!2.60e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.03e-37,76;UBERON:0001474,2.42e-34,82;UBERON:0004765,3.32e-31,90;UBERON:0002405,3.64e-30,93;UBERON:0002390,1.42e-28,98;UBERON:0003061,1.42e-28,98;UBERON:0001434,5.58e-28,100;UBERON:0002193,7.99e-26,108;UBERON:0002204,3.08e-16,167;UBERON:0003081,4.26e-13,203;UBERON:0000926,7.36e-08,315;UBERON:0004120,7.36e-08,315;UBERON:0006603,7.36e-08,315 | |||
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| ||
|short_description=p@chr10:27026938..27026954,+ | |||
}} | }} |
Latest revision as of 12:51, 23 July 2015
Short description: | p@chr10:27026938..27026954, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:27026938..27026954, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.62e-60 | 48 |
phagocyte | 2.62e-60 | 48 |
classical monocyte | 3.62e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.62e-60 | 42 |
monopoietic cell | 5.30e-48 | 59 |
monocyte | 5.30e-48 | 59 |
monoblast | 5.30e-48 | 59 |
promonocyte | 5.30e-48 | 59 |
macrophage dendritic cell progenitor | 2.06e-46 | 61 |
myeloid lineage restricted progenitor cell | 7.44e-43 | 66 |
granulocyte monocyte progenitor cell | 3.32e-42 | 67 |
myeloid leukocyte | 3.16e-39 | 72 |
myeloid cell | 7.99e-26 | 108 |
common myeloid progenitor | 7.99e-26 | 108 |
nongranular leukocyte | 3.52e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 4.02e-23 | 120 |
leukocyte | 2.98e-20 | 136 |
hematopoietic oligopotent progenitor cell | 6.76e-17 | 161 |
hematopoietic multipotent progenitor cell | 6.76e-17 | 161 |
hematopoietic stem cell | 3.92e-16 | 168 |
hematopoietic cell | 3.07e-15 | 177 |
intermediate monocyte | 8.34e-07 | 9 |
CD14-positive, CD16-positive monocyte | 8.34e-07 | 9 |
mesenchymal cell | 8.46e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.03e-37 | 76 |
bone element | 2.42e-34 | 82 |
skeletal element | 3.32e-31 | 90 |
immune system | 3.64e-30 | 93 |
hematopoietic system | 1.42e-28 | 98 |
blood island | 1.42e-28 | 98 |
skeletal system | 5.58e-28 | 100 |
hemolymphoid system | 7.99e-26 | 108 |
musculoskeletal system | 3.08e-16 | 167 |
lateral plate mesoderm | 4.26e-13 | 203 |
mesoderm | 7.36e-08 | 315 |
mesoderm-derived structure | 7.36e-08 | 315 |
presumptive mesoderm | 7.36e-08 | 315 |