FFCP PHASE1:Hg19::chr11:63330814..63330827,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54979 | |EntrezGene=54979 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17824 | |HGNC=17824 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NWW9 | |UniProt=Q9NWW9 | ||
|association_with_transcript=27bp_to_ENST00000255695,NM_017878,uc001nxg.1_5end | |association_with_transcript=27bp_to_ENST00000255695,NM_017878,uc001nxg.1_5end | ||
|cluster_id=chr11:63330814..63330827,- | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_2_at_HRASLS2_5end | |description=CAGE_peak_2_at_HRASLS2_5end | ||
|id=chr11:63330814..63330827,- | |id=chr11:63330814..63330827,- | ||
|ontology_enrichment_celltype=CL:0000945!1.58e-23!24;CL:0000826!1.58e-23!24;CL:0000236!3.21e-14!14;CL:0000838!1.59e-10!52;CL:0000542!3.17e-10!53;CL:0000051!3.17e-10!53 | |ontology_enrichment_celltype=CL:0000945!1.58e-23!24;CL:0000826!1.58e-23!24;CL:0000236!3.21e-14!14;CL:0000838!1.59e-10!52;CL:0000542!3.17e-10!53;CL:0000051!3.17e-10!53 | ||
|ontology_enrichment_celltype_v019=CL:0000236;5.83e-29;13!CL:0000945;1.58e-23;24!CL:0002097;9.04e-13;2!CL:0000542;6.00e-09;53!CL:0000174;8.35e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,8.57e-27,14;CL:0000945,1.85e-23,24;CL:0000826,1.85e-23,24;CL:0002097,1.08e-12,2;CL:0000838,6.08e-12,52;CL:0000542,1.12e-11,53;CL:0000051,1.12e-11,53;CL:0000174,9.40e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000051;6.00e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;1.54e-07;1!DOID:0050177;1.54e-07;1!DOID:0050427;1.54e-07;1!DOID:2355;5.03e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.44e-07,1;DOID:0050177,1.44e-07,1;DOID:0050427,1.44e-07,1;DOID:2355,7.40e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.70e-13!9;UBERON:0001557!3.24e-08!19;UBERON:0004921!2.02e-07!129;UBERON:0004185!2.02e-07!129;UBERON:0008947!7.26e-07!38;UBERON:0003258!7.26e-07!38 | |ontology_enrichment_uberon=UBERON:0001737!2.70e-13!9;UBERON:0001557!3.24e-08!19;UBERON:0004921!2.02e-07!129;UBERON:0004185!2.02e-07!129;UBERON:0008947!7.26e-07!38;UBERON:0003258!7.26e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;8.35e-09;3!UBERON:0001235;8.35e-09;3!UBERON:0006858;8.35e-09;3!UBERON:0005409;9.77e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,9.40e-09,3;UBERON:0001235,9.40e-09,3;UBERON:0006858,9.40e-09,3;UBERON:0005409,1.14e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.157421562627358,0,0,0,0,0.30120591877825,0,0.0774672005803016,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0.16072558669708,0,0,0,8.79981222306614,3.27683166757279,3.55803701545422,6.40095333849761,2.00197993518006,2.87376219977242,7.93253847341835,7.63243003628291,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709840800239063,0.842923450390509,0.241011029883482,0.882351781859152,0,0.237270619111097,0.808987848960987,1.56977172100277,0.38474715694639,0,0,0,0,0,0,0,0,2.21379189377604,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,1.10497186723076,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94970791705028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.822724546172388,1.29694662238543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,1.44876399560722,0,39.6315844664565,0.593929361665277,39.3165698687017,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0.179021174675609,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.06102203490647,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,3.09601475761687,0,0,0,0,0,0,0,0,0.19566461893209,0,0,2.41981432097328,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,0,0.17472666824203,0,0,0.146178634172371,0,0,0,0.677942222341597,0,0,0,9.77756913674015,0,0,1.19885765749278,0,0,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01607998478941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0.496166021811951,1.18566979138767,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15571898244382,3.64550705337374,0.260994291965212,0,0,0.489473409012935,0,0,0,0,0,0.168942440653073,0,0,0,0,1.16916185303633,0.132864840313363,0.327130788511688,0,0,0,0.59996218756479,0,0.172214979660816,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.177404740325278,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70762364458462,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0.199882311849858,0.178553938605658,0,0,2.92134555298607,0,0,0,0,0,1.5870805215462,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,1.86477734020959,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,6.41136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.157421562627358,0,0,0,0,0.30120591877825,0,0.0774672005803016,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0.16072558669708,0,0,0,8.79981222306614,3.27683166757279,3.55803701545422,6.40095333849761,2.00197993518006,2.87376219977242,7.93253847341835,7.63243003628291,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709840800239063,0.842923450390509,0.241011029883482,0.882351781859152,0,0.237270619111097,0.808987848960987,1.56977172100277,0.38474715694639,0,0,0,0,0,0,0,0,2.21379189377604,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,1.10497186723076,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94970791705028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.822724546172388,1.29694662238543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,1.44876399560722,0,39.6315844664565,0.593929361665277,39.3165698687017,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0.179021174675609,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.06102203490647,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,3.09601475761687,0,0,0,0,0,0,0,0,0.19566461893209,0,0,2.41981432097328,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,0,0.17472666824203,0,0,0.146178634172371,0,0,0,0.677942222341597,0,0,0,9.77756913674015,0,0,1.19885765749278,0,0,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01607998478941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0.496166021811951,1.18566979138767,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15571898244382,3.64550705337374,0.260994291965212,0,0,0.489473409012935,0,0,0,0,0,0.168942440653073,0,0,0,0,1.16916185303633,0.132864840313363,0.327130788511688,0,0,0,0.59996218756479,0,0.172214979660816,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.177404740325278,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70762364458462,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0.199882311849858,0.178553938605658,0,0,2.92134555298607,0,0,0,0,0,1.5870805215462,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,1.86477734020959,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,6.41136984606466 | ||
|short_description=p2@HRASLS2 | |short_description=p2@HRASLS2 | ||
}} | }} |
Latest revision as of 23:11, 18 September 2015
Short description: | p2@HRASLS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HRASLS2_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 27bp_to_ENST00000255695, NM_017878, uc001nxg.1_5end |
EntrezGene: | HRASLS2 |
HGNC: | 17824 |
UniProt: | Q9NWW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 8.57e-27 | 14 |
lymphocyte of B lineage | 1.85e-23 | 24 |
pro-B cell | 1.85e-23 | 24 |
cortical cell of adrenal gland | 1.08e-12 | 2 |
lymphoid lineage restricted progenitor cell | 6.08e-12 | 52 |
lymphocyte | 1.12e-11 | 53 |
common lymphoid progenitor | 1.12e-11 | 53 |
steroid hormone secreting cell | 9.40e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 9.40e-09 | 3 |
adrenal cortex | 9.40e-09 | 3 |
adrenal/interrenal gland | 9.40e-09 | 3 |
gastrointestinal system | 1.14e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.44e-07 | 1 |
monogenic disease | 1.44e-07 | 1 |
xeroderma pigmentosum | 1.44e-07 | 1 |
anemia | 7.40e-07 | 1 |