FFCP PHASE1:Hg19::chr10:4004121..4004130,+: Difference between revisions
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|id=chr10:4004121..4004130,+
|short_description=p@chr10:4004121..4004130,+
|description=CAGE_peak_at_chr10:4004121..4004130,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:4004121..4004130,+ | |||
|coexpression_cluster_id=C121 | |||
|description=CAGE_peak_at_chr10:4004121..4004130,+ | |||
|id=chr10:4004121..4004130,+ | |||
|ontology_enrichment_celltype=CL:0000625!1.92e-49!11;CL:0000791!4.43e-41!18;CL:0000789!4.43e-41!18;CL:0002420!4.43e-41!18;CL:0002419!4.43e-41!18;CL:0000790!4.43e-41!18;CL:0000084!1.64e-29!25;CL:0000827!1.64e-29!25;CL:0002127!4.72e-17!1;CL:0000914!4.72e-17!1;CL:0000911!4.72e-17!1;CL:0000814!4.72e-17!1;CL:0002042!4.72e-17!1;CL:0002039!4.72e-17!1;CL:0002040!4.72e-17!1;CL:0002041!4.72e-17!1;CL:0000738!1.41e-14!140;CL:0000838!5.28e-14!52;CL:0000542!9.88e-14!53;CL:0000051!9.88e-14!53;CL:0000453!2.23e-13!5;CL:0002274!4.39e-13!5;CL:0000457!4.39e-13!5;CL:0002191!4.39e-13!5;CL:0000097!4.39e-13!5;CL:0000831!4.39e-13!5;CL:0002028!4.39e-13!5;CL:0002032!3.25e-12!165;CL:0000837!3.25e-12!165;CL:0000037!1.13e-11!172;CL:0000566!1.13e-11!172;CL:0000988!5.67e-11!182;CL:0000893!3.43e-09!2;CL:0002489!3.43e-09!2;CL:0000809!3.43e-09!2;CL:0000808!3.43e-09!2;CL:0000894!3.43e-09!2;CL:0000806!3.43e-09!2;CL:0000807!3.43e-09!2;CL:0000805!3.43e-09!2;CL:0002425!3.43e-09!2;CL:0002031!4.24e-09!124;CL:0000990!7.77e-08!8;CL:0000163!1.13e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.23e-66;1!CL:0000911;1.23e-66;1!CL:0000814;1.23e-66;1!CL:0000791;8.40e-16;18!CL:0000789;8.40e-16;18!CL:0002419;8.40e-16;18!CL:0000453;1.83e-14;5!CL:0000084;1.03e-11;25!CL:0000990;1.21e-08;8!CL:0000625;2.47e-07;11!CL:0000451;2.63e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.23e-66,1;CL:0000914,1.23e-66,1;CL:0000911,1.23e-66,1;CL:0000814,1.23e-66,1;CL:0002042,1.23e-66,1;CL:0002039,1.23e-66,1;CL:0002040,1.23e-66,1;CL:0002041,1.23e-66,1;CL:0000893,3.61e-34,2;CL:0002489,3.61e-34,2;CL:0000809,3.61e-34,2;CL:0000808,3.61e-34,2;CL:0000894,3.61e-34,2;CL:0000806,3.61e-34,2;CL:0000807,3.61e-34,2;CL:0000805,3.61e-34,2;CL:0002425,3.61e-34,2;CL:0000791,8.40e-16,18;CL:0000789,8.40e-16,18;CL:0002420,8.40e-16,18;CL:0002419,8.40e-16,18;CL:0000790,8.40e-16,18;CL:0000453,1.83e-14,5;CL:0000084,1.03e-11,25;CL:0000827,1.03e-11,25;CL:0000990,1.21e-08,8;CL:0000625,2.47e-07,11;CL:0000451,2.63e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002425;3.61e-34;2!CL:0000790;8.40e-16;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.35e-18,4;UBERON:0005058,7.35e-18,4;UBERON:0009113,7.35e-18,4;UBERON:0003295,7.35e-18,4;UBERON:0005562,7.35e-18,4;UBERON:0003351,2.19e-12,6;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0000974,5.73e-08,10;UBERON:0003408,5.73e-08,10;UBERON:0001042,5.73e-08,10;UBERON:0009145,5.73e-08,10;UBERON:0006562,2.32e-07,11;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11 | |||
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|short_description=p@chr10:4004121..4004130,+ | |||
}} | }} |
Latest revision as of 13:39, 23 July 2015
Short description: | p@chr10:4004121..4004130, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:4004121..4004130, + |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.23e-66 | 1 |
immature NK T cell | 1.23e-66 | 1 |
effector T cell | 1.23e-66 | 1 |
mature NK T cell | 1.23e-66 | 1 |
immature NK T cell stage IV | 1.23e-66 | 1 |
immature NK T cell stage I | 1.23e-66 | 1 |
immature NK T cell stage II | 1.23e-66 | 1 |
immature NK T cell stage III | 1.23e-66 | 1 |
thymocyte | 3.61e-34 | 2 |
double negative thymocyte | 3.61e-34 | 2 |
double-positive, alpha-beta thymocyte | 3.61e-34 | 2 |
DN4 thymocyte | 3.61e-34 | 2 |
DN1 thymic pro-T cell | 3.61e-34 | 2 |
DN2 thymocyte | 3.61e-34 | 2 |
DN3 thymocyte | 3.61e-34 | 2 |
immature single positive thymocyte | 3.61e-34 | 2 |
early T lineage precursor | 3.61e-34 | 2 |
mature alpha-beta T cell | 8.40e-16 | 18 |
alpha-beta T cell | 8.40e-16 | 18 |
immature T cell | 8.40e-16 | 18 |
mature T cell | 8.40e-16 | 18 |
immature alpha-beta T cell | 8.40e-16 | 18 |
Langerhans cell | 1.83e-14 | 5 |
T cell | 1.03e-11 | 25 |
pro-T cell | 1.03e-11 | 25 |
conventional dendritic cell | 1.21e-08 | 8 |
CD8-positive, alpha-beta T cell | 2.47e-07 | 11 |
dendritic cell | 2.63e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.35e-18 | 4 |
hemolymphoid system gland | 7.35e-18 | 4 |
thymic region | 7.35e-18 | 4 |
pharyngeal gland | 7.35e-18 | 4 |
thymus primordium | 7.35e-18 | 4 |
pharyngeal epithelium | 2.19e-12 | 6 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
neck | 5.73e-08 | 10 |
gland of gut | 5.73e-08 | 10 |
chordate pharynx | 5.73e-08 | 10 |
pharyngeal region of foregut | 5.73e-08 | 10 |
pharynx | 2.32e-07 | 11 |
entire pharyngeal arch endoderm | 2.32e-07 | 11 |
early pharyngeal endoderm | 2.32e-07 | 11 |