FFCP PHASE1:Mm9::chr9:108757861..108757868,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:108757861..108757868,+ | |||
|description=CAGE_peak_at_chr9:108757861..108757868,+ | |description=CAGE_peak_at_chr9:108757861..108757868,+ | ||
|id=chr9:108757861..108757868,+ | |id=chr9:108757861..108757868,+ | ||
|ontology_enrichment_celltype=CL:0000473!6.72e-14!3;CL:0000627!6.72e-14!3;CL:0000682!6.72e-14!3;CL:0000239!1.24e-12!6;CL:0000677!1.24e-12!6;CL:0000212!1.24e-12!6;CL:0000584!1.24e-12!6;CL:0000075!7.55e-11!7;CL:0002563!1.83e-08!9;CL:0002251!1.83e-08!9;CL:0000066!3.45e-08!25 | |ontology_enrichment_celltype=CL:0000473!6.72e-14!3;CL:0000627!6.72e-14!3;CL:0000682!6.72e-14!3;CL:0000239!1.24e-12!6;CL:0000677!1.24e-12!6;CL:0000212!1.24e-12!6;CL:0000584!1.24e-12!6;CL:0000075!7.55e-11!7;CL:0002563!1.83e-08!9;CL:0002251!1.83e-08!9;CL:0000066!3.45e-08!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.81e-19,6;CL:0000677,2.81e-19,6;CL:0000584,2.81e-19,6;CL:0000075,1.22e-16,7;CL:0002563,4.09e-13,9;CL:0002251,4.09e-13,9;CL:0002076,3.82e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.87e-23!15;UBERON:0001242!1.43e-16!13;UBERON:0000060!1.43e-16!13;UBERON:0001262!1.43e-16!13;UBERON:0004786!1.43e-16!13;UBERON:0000160!9.63e-16!43;UBERON:0004923!3.43e-14!24;UBERON:0005409!6.79e-11!59;UBERON:0001962!4.66e-10!2;UBERON:0001961!4.66e-10!2;UBERON:0001744!4.66e-10!2;UBERON:0003350!1.83e-08!9;UBERON:0004808!1.83e-08!9;UBERON:0001277!1.83e-08!9;UBERON:0002465!5.60e-07!3;UBERON:0000485!6.13e-07!11 | |ontology_enrichment_uberon=UBERON:0000344!1.87e-23!15;UBERON:0001242!1.43e-16!13;UBERON:0000060!1.43e-16!13;UBERON:0001262!1.43e-16!13;UBERON:0004786!1.43e-16!13;UBERON:0000160!9.63e-16!43;UBERON:0004923!3.43e-14!24;UBERON:0005409!6.79e-11!59;UBERON:0001962!4.66e-10!2;UBERON:0001961!4.66e-10!2;UBERON:0001744!4.66e-10!2;UBERON:0003350!1.83e-08!9;UBERON:0004808!1.83e-08!9;UBERON:0001277!1.83e-08!9;UBERON:0002465!5.60e-07!3;UBERON:0000485!6.13e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.69e-20,31;UBERON:0001242,6.92e-16,13;UBERON:0001262,6.92e-16,13;UBERON:0004786,6.92e-16,13;UBERON:0000344,7.67e-14,15;UBERON:0005409,3.25e-13,47;UBERON:0003350,4.09e-13,9;UBERON:0004808,4.09e-13,9;UBERON:0001277,4.09e-13,9;UBERON:0000485,7.32e-11,11;UBERON:0004923,7.89e-09,24;UBERON:0001155,2.03e-07,2;UBERON:0000059,2.03e-07,2 | |||
|phase1_expression=0,1.39590163055744,0.454999239389536,1.81478526784098,1.00179145989269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.91763712426868,0.57423196411502,0.86152399231815,0.430942465371778,0.570070258369122,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.93879444265976,1.05780226665418,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.432276099749388,2.58883655230677,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.39590163055744,0.454999239389536,1.81478526784098,1.00179145989269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.91763712426868,0.57423196411502,0.86152399231815,0.430942465371778,0.570070258369122,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.93879444265976,1.05780226665418,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.432276099749388,2.58883655230677,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:108757861..108757868,+ | |short_description=p@chr9:108757861..108757868,+ | ||
}} | }} |
Latest revision as of 14:06, 4 August 2015
Short description: | p@chr9:108757861..108757868, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:108757861..108757868, + |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.81e-19 | 6 |
gut absorptive cell | 2.81e-19 | 6 |
enterocyte | 2.81e-19 | 6 |
columnar/cuboidal epithelial cell | 1.22e-16 | 7 |
intestinal epithelial cell | 4.09e-13 | 9 |
epithelial cell of alimentary canal | 4.09e-13 | 9 |
endo-epithelial cell | 3.82e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.69e-20 | 31 |
intestinal mucosa | 6.92e-16 | 13 |
wall of intestine | 6.92e-16 | 13 |
gastrointestinal system mucosa | 6.92e-16 | 13 |
mucosa | 7.67e-14 | 15 |
gastrointestinal system | 3.25e-13 | 47 |
epithelium of mucosa | 4.09e-13 | 9 |
gastrointestinal system epithelium | 4.09e-13 | 9 |
intestinal epithelium | 4.09e-13 | 9 |
simple columnar epithelium | 7.32e-11 | 11 |
organ component layer | 7.89e-09 | 24 |
colon | 2.03e-07 | 2 |
large intestine | 2.03e-07 | 2 |