FFCP PHASE1:Hg19::chr16:75299845..75299883,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9564 | |EntrezGene=9564 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=971 | |HGNC=971 | ||
|TSSclassifier=strong | |||
|UniProt=F5GXV6,B7Z7X7,P56945 | |UniProt=F5GXV6,B7Z7X7,P56945 | ||
|association_with_transcript=0bp_to_ENST00000535626,NM_001170720_5end | |association_with_transcript=0bp_to_ENST00000535626,NM_001170720_5end | ||
|cluster_id=chr16:75299845..75299883,- | |||
|coexpression_cluster_id=C2390 | |||
|description=CAGE_peak_2_at_BCAR1_5end | |description=CAGE_peak_2_at_BCAR1_5end | ||
|id=chr16:75299845..75299883,- | |id=chr16:75299845..75299883,- | ||
|ontology_enrichment_celltype=CL:0000220!5.91e-26!246;CL:0002321!1.61e-25!248;CL:0000222!1.56e-24!119;CL:0000055!1.07e-18!180;CL:0000115!7.99e-17!35;CL:0002078!1.73e-16!44;CL:0002139!3.31e-16!24;CL:0000213!2.39e-14!57;CL:0000215!2.39e-14!57;CL:0000071!7.61e-13!18;CL:0002546!7.61e-13!18;CL:0000183!4.95e-11!59;CL:0000066!4.45e-10!254;CL:0000192!4.29e-09!42;CL:0000514!4.29e-09!42;CL:0000680!7.93e-09!57;CL:0000056!7.93e-09!57;CL:0000355!7.93e-09!57;CL:0000187!9.49e-09!54;CL:1000449!1.43e-08!16;CL:0000057!2.74e-08!75;CL:0000076!1.23e-07!62;CL:1000497!1.98e-07!18;CL:0002518!1.98e-07!18;CL:1000413!3.00e-07!9;CL:0000359!3.37e-07!32;CL:0000393!3.68e-07!60;CL:0000211!3.68e-07!60;CL:0002681!4.08e-07!13;CL:0002584!4.08e-07!13 | |ontology_enrichment_celltype=CL:0000220!5.91e-26!246;CL:0002321!1.61e-25!248;CL:0000222!1.56e-24!119;CL:0000055!1.07e-18!180;CL:0000115!7.99e-17!35;CL:0002078!1.73e-16!44;CL:0002139!3.31e-16!24;CL:0000213!2.39e-14!57;CL:0000215!2.39e-14!57;CL:0000071!7.61e-13!18;CL:0002546!7.61e-13!18;CL:0000183!4.95e-11!59;CL:0000066!4.45e-10!254;CL:0000192!4.29e-09!42;CL:0000514!4.29e-09!42;CL:0000680!7.93e-09!57;CL:0000056!7.93e-09!57;CL:0000355!7.93e-09!57;CL:0000187!9.49e-09!54;CL:1000449!1.43e-08!16;CL:0000057!2.74e-08!75;CL:0000076!1.23e-07!62;CL:1000497!1.98e-07!18;CL:0002518!1.98e-07!18;CL:1000413!3.00e-07!9;CL:0000359!3.37e-07!32;CL:0000393!3.68e-07!60;CL:0000211!3.68e-07!60;CL:0002681!4.08e-07!13;CL:0002584!4.08e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.09e-16;24!CL:0000115;1.18e-14;36!CL:0000071;7.07e-13;18!CL:0002078;1.95e-11;45!CL:0000213;1.70e-09;58!CL:0000215;1.70e-09;58!CL:1000449;9.49e-09;15!CL:1000497;1.49e-07;17!CL:0002518;1.49e-07;17!CL:0002681;2.73e-07;12!CL:0002584;2.73e-07;12!CL:1000413;2.89e-07;9!CL:0000192;3.37e-07;43!CL:0000359;4.86e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.32e-26,250;CL:0000222,3.26e-25,121;CL:0000115,1.53e-17,36;CL:0002078,3.54e-17,45;CL:0002139,3.09e-16,24;CL:0000213,5.72e-15,58;CL:0000215,5.72e-15,58;CL:0000071,7.22e-13,18;CL:0002546,7.22e-13,18;CL:0000066,4.74e-10,253;CL:0000192,4.09e-09,43;CL:0000514,4.09e-09,43;CL:0000680,7.16e-09,58;CL:0000056,7.16e-09,58;CL:0000355,7.16e-09,58;CL:0000187,8.62e-09,55;CL:1000449,9.28e-09,15;CL:0000057,1.26e-08,76;CL:1000497,1.56e-07,17;CL:0002518,1.56e-07,17;CL:0000076,1.83e-07,63;CL:0002681,2.68e-07,12;CL:0002584,2.68e-07,12;CL:1000413,2.92e-07,9;CL:0000393,3.27e-07,61;CL:0000211,3.27e-07,61;CL:0000359,3.29e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002546;7.07e-13;18!CL:0000222;1.73e-08;121!CL:0000514;3.37e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.97e-32!312;UBERON:0000483!2.71e-31!309;UBERON:0000475!7.96e-28!365;UBERON:0004111!1.41e-26!241;UBERON:0002049!8.67e-26!79;UBERON:0007798!8.67e-26!79;UBERON:0000477!1.25e-25!286;UBERON:0003914!4.67e-24!118;UBERON:0000025!1.09e-22!194;UBERON:0000468!1.45e-22!659;UBERON:0000055!5.95e-22!69;UBERON:0000481!7.55e-21!347;UBERON:0000467!4.77e-20!625;UBERON:0000480!9.19e-20!626;UBERON:0004872!3.19e-19!84;UBERON:0001981!2.45e-18!60;UBERON:0007500!2.45e-18!60;UBERON:0004537!2.45e-18!60;UBERON:0006965!2.45e-18!60;UBERON:0005256!3.96e-18!143;UBERON:0000490!1.68e-17!138;UBERON:0002100!1.69e-17!216;UBERON:0004535!4.86e-15!110;UBERON:0001009!5.55e-15!113;UBERON:0002050!3.68e-14!605;UBERON:0005423!3.68e-14!605;UBERON:0000922!5.19e-14!612;UBERON:0000923!7.04e-14!604;UBERON:0005291!7.04e-14!604;UBERON:0006598!7.04e-14!604;UBERON:0002532!7.04e-14!604;UBERON:0001986!7.61e-13!18;UBERON:0004638!7.61e-13!18;UBERON:0004852!7.61e-13!18;UBERON:0000487!4.12e-12!22;UBERON:0000914!8.18e-12!83;UBERON:0002329!8.18e-12!83;UBERON:0003077!8.18e-12!83;UBERON:0003059!8.18e-12!83;UBERON:0007282!8.18e-12!83;UBERON:0009618!8.18e-12!83;UBERON:0007285!8.18e-12!83;UBERON:0000486!1.38e-11!82;UBERON:0003104!2.28e-11!238;UBERON:0009142!2.28e-11!238;UBERON:0001637!2.80e-11!42;UBERON:0003509!2.80e-11!42;UBERON:0004572!2.80e-11!42;UBERON:0006914!1.78e-10!25;UBERON:0004290!2.59e-10!70;UBERON:0000064!4.58e-10!219;UBERON:0002385!7.55e-10!63;UBERON:0001015!7.55e-10!63;UBERON:0000383!7.55e-10!63;UBERON:0001134!9.38e-10!61;UBERON:0002036!9.38e-10!61;UBERON:0003082!9.38e-10!61;UBERON:0004121!5.13e-09!169;UBERON:0009569!5.57e-09!113;UBERON:0004573!1.27e-08!33;UBERON:0004571!1.27e-08!33;UBERON:0004211!1.43e-08!16;UBERON:0001285!1.43e-08!16;UBERON:0007684!1.43e-08!16;UBERON:0003220!1.43e-08!16;UBERON:0004208!1.43e-08!16;UBERON:0000353!2.44e-08!17;UBERON:0000924!4.20e-08!173;UBERON:0006601!4.20e-08!173;UBERON:0000033!4.95e-08!123;UBERON:0006555!5.22e-08!17;UBERON:0005103!5.22e-08!17;UBERON:0000083!5.22e-08!17;UBERON:0009201!5.22e-08!17;UBERON:0004819!5.22e-08!17;UBERON:0006553!5.22e-08!17;UBERON:0003074!5.22e-08!17;UBERON:0003060!5.22e-08!17;UBERON:0004876!1.36e-07!20;UBERON:0003103!1.88e-07!69;UBERON:0000080!2.77e-07!18;UBERON:0002120!2.77e-07!18;UBERON:0004875!2.77e-07!18;UBERON:0005721!2.77e-07!18;UBERON:0005754!2.77e-07!18;UBERON:0007297!2.77e-07!18;UBERON:0003915!3.00e-07!9;UBERON:0004700!3.00e-07!9;UBERON:0001917!3.00e-07!9;UBERON:0001225!4.08e-07!13;UBERON:0008987!4.08e-07!13;UBERON:0002417!7.42e-07!61;UBERON:0000916!7.42e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.07e-13;18!UBERON:0001986;7.07e-13;18!UBERON:0004852;7.07e-13;18!UBERON:0000487;3.78e-12;22!UBERON:0003914;1.63e-11;74!UBERON:0000055;6.27e-11;65!UBERON:0002049;1.08e-10;75!UBERON:0007798;1.08e-10;75!UBERON:0006914;1.53e-10;25!UBERON:0000490;1.87e-10;33!UBERON:0007500;2.02e-10;56!UBERON:0001981;2.02e-10;56!UBERON:0004537;2.02e-10;56!UBERON:0006555;9.49e-09;15!UBERON:0004819;9.49e-09;15!UBERON:0001285;9.49e-09;15!UBERON:0007684;9.49e-09;15!UBERON:0001637;9.67e-09;42!UBERON:0003509;9.67e-09;42!UBERON:0004572;9.67e-09;42!UBERON:0000353;4.47e-08;15!UBERON:0004573;4.84e-08;33!UBERON:0004571;4.84e-08;33!UBERON:0000025;7.14e-08;93!UBERON:0006554;1.59e-07;30!UBERON:0001008;1.59e-07;30!UBERON:0001225;2.73e-07;12!UBERON:0008987;2.73e-07;12!UBERON:0003915;2.89e-07;9!UBERON:0004700;2.89e-07;9!UBERON:0001917;2.89e-07;9 | |||
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|short_description=p2@BCAR1 | |short_description=p2@BCAR1 | ||
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Latest revision as of 21:31, 17 September 2015
Short description: | p2@BCAR1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BCAR1_5end |
Coexpression cluster: | C2390_Renal_Endothelial_Alveolar_Hepatic_Mesenchymal_Sebocyte_mesothelioma |
Association with transcript: | 0bp_to_ENST00000535626, NM_001170720_5end |
EntrezGene: | BCAR1 |
HGNC: | 971 |
UniProt: | F5GXV6B7Z7X7P56945 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.32e-26 | 250 |
mesodermal cell | 3.26e-25 | 121 |
endothelial cell | 1.53e-17 | 36 |
meso-epithelial cell | 3.54e-17 | 45 |
endothelial cell of vascular tree | 3.09e-16 | 24 |
lining cell | 5.72e-15 | 58 |
barrier cell | 5.72e-15 | 58 |
blood vessel endothelial cell | 7.22e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.22e-13 | 18 |
epithelial cell | 4.74e-10 | 253 |
smooth muscle cell | 4.09e-09 | 43 |
smooth muscle myoblast | 4.09e-09 | 43 |
muscle precursor cell | 7.16e-09 | 58 |
myoblast | 7.16e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.16e-09 | 58 |
muscle cell | 8.62e-09 | 55 |
epithelial cell of nephron | 9.28e-09 | 15 |
fibroblast | 1.26e-08 | 76 |
kidney cell | 1.56e-07 | 17 |
kidney epithelial cell | 1.56e-07 | 17 |
squamous epithelial cell | 1.83e-07 | 63 |
kidney cortical cell | 2.68e-07 | 12 |
renal cortical epithelial cell | 2.68e-07 | 12 |
endothelial cell of artery | 2.92e-07 | 9 |
electrically responsive cell | 3.27e-07 | 61 |
electrically active cell | 3.27e-07 | 61 |
vascular associated smooth muscle cell | 3.29e-07 | 32 |