Personal tools

FFCP PHASE1:Mm9::chr9:44150379..44150395,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=15288
|EntrezGene=15288
|HGNC=
|HGNC=
|MCL_coexpression_id=15
|TSSclassifier=NA
|UniProt=P22907,Q3UPG1
|UniProt=P22907,Q3UPG1
|association_with_transcript=68bp_to_ENSMUST00000097558,NM_001110251,uc009pcz.2_5end
|association_with_transcript=68bp_to_ENSMUST00000097558,NM_001110251,uc009pcz.2_5end
|cluster_id=chr9:44150379..44150395,-
|description=CAGE_peak_1_at_Hmbs_5end
|description=CAGE_peak_1_at_Hmbs_5end
|id=chr9:44150379..44150395,-
|id=chr9:44150379..44150395,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,0,0,0,0.0797721589953364,0,0,725.513061234513,1462.27638108932,1888.11750906787,3.15462165358238,4.66189074259512,69.599902894877,0,0,0,0,0,0,0,0,0,0,0,341.011471647822,278.62434877581,380.356034437053,0,0,0,50.6423273191658,8.5946887897618,19.3703785270305,7.64700934440319,8.19654581950135,11.1667381197165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0.420649922702764,2.57085885963423,1.32521124570968,0.122490799214954,0.0958454710182364,0,0,0,0,0.131886287730194,0.365950574409639,0.52091337055676,0.558365998002762,0,0,0,0.854230084794618,0.931997229126503,0,0,0,0,0.679971333707751,0,0,0,49.4364358863767,0,0,0,0,0,0,0,0,0,0,17.9268691158924,0,0.148442139064825,53.7804512975021,67.8958016636075,47.0455614402359,22.4576734423408,20.8132011630198,0.251333182659351,0.988779870937496,1.15679485535929,455.574434254185,74.2509841258608,248.225866749482,394.688456052071,0,0,0,0,0,0,0.508280908292259,0,0,0,0,0,0,0.162241263067758,1.2220723662038,225.923058627929,0,0,4.81445638962004,1.83921683546778,1.0803727788321,20.4958552256572,0,0.12811372028485,0.281105173679186,0,10.5628316537093,4.9167580843633,1.05570674498369,0.876782929710299,1.39023624612799,1.74126083261083,0.411564272815887,4.97585667046233,0,0.257347907114715,0.284163499395593,48.8816823183784,46.6706859362381,4.8616756594474,1.89395788468168,3.93528463494808,1.3884040159864,1.39520366850245,1.60964040839772,0.467061369468678,0.822799249567402,0.32833492815819,1.13496333364198,0.730999937126662,0.219550115291051,0.939444931322602,0,0.308713837137853,0.330418782983798,0,11.0909890278322,26.7072172639504,9.79392706047909,1.00841762311671,0.667134131534611,4.75564065281398,0,0.164698954724011,1.00534083520108,0.397912944082302,0.19496408711912,0,0,0,4.1726938209678,23.0781995471652,3.38123207019241,1.62921062276251,0.969762435838129,0.701358198903186,0.0632365371242573,0.738050739898011,0,0.246794327843601,0.296452627087149,638.849909786924,780.535769594529,902.821381225188,1050.20684842828,1037.5441412549,1083.9422510335,532.52555042145,348.915008019876,314.098256687165,66.1333750025831,69.5903572140101,10.9213185590096,1.01031551178845,0.538192240565737,0,0.184753190166605,18.5701583535075,6.84452901056509,1.86719594352707,2.11221223459652,0.670025029767263,4.76087281772027,4.87834119644497,4.88668946729192,5.09368786192182,1.11618338060241,3.11340297959902,2.07221978239075,1.44649058581512,0,0,0,0,0,0.35163505977661,0,13.3809591418318,0,0,0,0,0,0,0,0,0,0,0.425820255624806,17.9846259703928,12.0536349921646,0,0,22.5785991624133,7.25576536715402,5.09233715340925,9.7449624650655,2.76691633149535,4.65170927702798,2.54473610634254,6.77345018930971,0,3.16255825724996,12.3762651897824,0.340439605753788,6.30213829109586,3.88076051348264,1.28602221018955,0.709360934569094,1.07021290561242,0.987294123612726,0.304464949114599,4.22409074514679,1.48282449604674,0,0,0,0.120625849856312,0,0.328281799490123,0,1.29797711407357,773.703348252677,68.9332138997163,332.609371156002,1368.30847168208,949.478105750241,967.731672663591,0.169978429993855,0.139951452323658,1.10559979043539,0,13.6024477239888,17.8921131071627,10.2605073780711,5.22720740036172,10.6997656235627,11.0588764035553,10.4143354213923,0.785267825952089,0,0,0,7.62534384824292,16.3803905552527,2.72231663681667,6.07051170345336,5.06868376472335,10.2100797621806,5.07797100891405,0,0,0,0,4.25722952109345,2.67048488628551,0.77952493786677,0.358053391334963,0,0,0,0,0.0762068066549998,0,0,0,0,0.453460767230423,0,0,0,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5203955818436,48.2820096815248,145.465032102522,156.560725791981,187.603780552044,57.5430181448544,68.8964856185007,66.3432884309239,68.6767108526485,63.9323945762408,64.6372214720111,65.0760877781963,53.2820177503631,53.2689268008512,49.7391161155611,45.247900671892,49.0190698746739,47.4556682340714,57.6920261124629,66.8283097410164,64.4594194484581,62.4714837680868,51.0253446487267,67.4407373174004,54.8657687821377,59.6532985636319,57.8052394277961,69.7134735310284,57.0377278152619,74.0707798588215,49.1148975034081,45.6075753398859,56.0646529142474,51.2840944325547,70.4109130081166,1.49886346762768,36.9611941343745,48.5608582149154,3.06061331310149,79.4129108830256,92.5152664125482
|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,0,0,0,0.0797721589953364,0,0,725.513061234513,1462.27638108932,1888.11750906787,3.15462165358238,4.66189074259512,69.599902894877,0,0,0,0,0,0,0,0,0,0,0,341.011471647822,278.62434877581,380.356034437053,0,0,0,50.6423273191658,8.5946887897618,19.3703785270305,7.64700934440319,8.19654581950135,11.1667381197165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0.420649922702764,2.57085885963423,1.32521124570968,0.122490799214954,0.0958454710182364,0,0,0,0,0.131886287730194,0.365950574409639,0.52091337055676,0.558365998002762,0,0,0,0.854230084794618,0.931997229126503,0,0,0,0,0.679971333707751,0,0,0,49.4364358863767,0,0,0,0,0,0,0,0,0,0,17.9268691158924,0,0.148442139064825,53.7804512975021,67.8958016636075,47.0455614402359,22.4576734423408,20.8132011630198,0.251333182659351,0.988779870937496,1.15679485535929,455.574434254185,74.2509841258608,248.225866749482,394.688456052071,0,0,0,0,0,0,0.508280908292259,0,0,0,0,0,0,0.162241263067758,1.2220723662038,225.923058627929,0,0,4.81445638962004,1.83921683546778,1.0803727788321,20.4958552256572,0,0.12811372028485,0.281105173679186,0,10.5628316537093,4.9167580843633,1.05570674498369,0.876782929710299,1.39023624612799,1.74126083261083,0.411564272815887,4.97585667046233,0,0.257347907114715,0.284163499395593,48.8816823183784,46.6706859362381,4.8616756594474,1.89395788468168,3.93528463494808,1.3884040159864,1.39520366850245,1.60964040839772,0.467061369468678,0.822799249567402,0.32833492815819,1.13496333364198,0.730999937126662,0.219550115291051,0.939444931322602,0,0.308713837137853,0.330418782983798,0,11.0909890278322,26.7072172639504,9.79392706047909,1.00841762311671,0.667134131534611,4.75564065281398,0,0.164698954724011,1.00534083520108,0.397912944082302,0.19496408711912,0,0,0,4.1726938209678,23.0781995471652,3.38123207019241,1.62921062276251,0.969762435838129,0.701358198903186,0.0632365371242573,0.738050739898011,0,0.246794327843601,0.296452627087149,638.849909786924,780.535769594529,902.821381225188,1050.20684842828,1037.5441412549,1083.9422510335,532.52555042145,348.915008019876,314.098256687165,66.1333750025831,69.5903572140101,10.9213185590096,1.01031551178845,0.538192240565737,0,0.184753190166605,18.5701583535075,6.84452901056509,1.86719594352707,2.11221223459652,0.670025029767263,4.76087281772027,4.87834119644497,4.88668946729192,5.09368786192182,1.11618338060241,3.11340297959902,2.07221978239075,1.44649058581512,0,0,0,0,0,0.35163505977661,0,13.3809591418318,0,0,0,0,0,0,0,0,0,0,0.425820255624806,17.9846259703928,12.0536349921646,0,0,22.5785991624133,7.25576536715402,5.09233715340925,9.7449624650655,2.76691633149535,4.65170927702798,2.54473610634254,6.77345018930971,0,3.16255825724996,12.3762651897824,0.340439605753788,6.30213829109586,3.88076051348264,1.28602221018955,0.709360934569094,1.07021290561242,0.987294123612726,0.304464949114599,4.22409074514679,1.48282449604674,0,0,0,0.120625849856312,0,0.328281799490123,0,1.29797711407357,773.703348252677,68.9332138997163,332.609371156002,1368.30847168208,949.478105750241,967.731672663591,0.169978429993855,0.139951452323658,1.10559979043539,0,13.6024477239888,17.8921131071627,10.2605073780711,5.22720740036172,10.6997656235627,11.0588764035553,10.4143354213923,0.785267825952089,0,0,0,7.62534384824292,16.3803905552527,2.72231663681667,6.07051170345336,5.06868376472335,10.2100797621806,5.07797100891405,0,0,0,0,4.25722952109345,2.67048488628551,0.77952493786677,0.358053391334963,0,0,0,0,0.0762068066549998,0,0,0,0,0.453460767230423,0,0,0,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5203955818436,48.2820096815248,145.465032102522,156.560725791981,187.603780552044,57.5430181448544,68.8964856185007,66.3432884309239,68.6767108526485,63.9323945762408,64.6372214720111,65.0760877781963,53.2820177503631,53.2689268008512,49.7391161155611,45.247900671892,49.0190698746739,47.4556682340714,57.6920261124629,66.8283097410164,64.4594194484581,62.4714837680868,51.0253446487267,67.4407373174004,54.8657687821377,59.6532985636319,57.8052394277961,69.7134735310284,57.0377278152619,74.0707798588215,49.1148975034081,45.6075753398859,56.0646529142474,51.2840944325547,70.4109130081166,1.49886346762768,36.9611941343745,48.5608582149154,3.06061331310149,79.4129108830256,92.5152664125482
|short_description=p1@Hmbs
|short_description=p1@Hmbs
}}
}}

Latest revision as of 16:50, 26 September 2015

Short description:p1@Hmbs
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hmbs_5end
Coexpression cluster:MCL_coexpression_mm9:15
Association with transcript: 68bp_to_ENSMUST00000097558, NM_001110251, uc009pcz.2_5end
EntrezGene:Hmbs
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
500
1000
1500
2000




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data