FFCP PHASE1:Mm9::chr9:44961019..44961022,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=503 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:44961019..44961022,+ | |||
|description=CAGE_peak_at_chr9:44961019..44961022,+ | |description=CAGE_peak_at_chr9:44961019..44961022,+ | ||
|id=chr9:44961019..44961022,+ | |id=chr9:44961019..44961022,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.37e-12!50;CL:0000393!7.74e-11!39;CL:0000211!7.74e-11!39;CL:0000117!2.08e-10!23;CL:0000337!2.08e-10!23;CL:0002610!1.38e-09!3;CL:0002614!2.01e-09!3;CL:0002319!2.59e-09!43;CL:0000221!4.95e-09!44;CL:0000133!4.95e-09!44;CL:0002494!2.15e-08!3;CL:0000737!2.15e-08!3;CL:0000746!2.15e-08!3;CL:0000513!2.15e-08!3;CL:0000540!4.43e-08!33;CL:0000047!4.43e-08!33;CL:0000031!4.43e-08!33;CL:0000404!4.43e-08!33;CL:0002321!2.54e-07!70;CL:0000220!2.54e-07!70 | |ontology_enrichment_celltype=CL:0000055!9.37e-12!50;CL:0000393!7.74e-11!39;CL:0000211!7.74e-11!39;CL:0000117!2.08e-10!23;CL:0000337!2.08e-10!23;CL:0002610!1.38e-09!3;CL:0002614!2.01e-09!3;CL:0002319!2.59e-09!43;CL:0000221!4.95e-09!44;CL:0000133!4.95e-09!44;CL:0002494!2.15e-08!3;CL:0000737!2.15e-08!3;CL:0000746!2.15e-08!3;CL:0000513!2.15e-08!3;CL:0000540!4.43e-08!33;CL:0000047!4.43e-08!33;CL:0000031!4.43e-08!33;CL:0000404!4.43e-08!33;CL:0002321!2.54e-07!70;CL:0000220!2.54e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,4.47e-25,3;CL:0002614,1.36e-24,3;CL:0000117,1.04e-21,23;CL:0000337,1.04e-21,23;CL:0002611,2.47e-16,2;CL:0000540,5.28e-15,33;CL:0000047,5.28e-15,33;CL:0000031,5.28e-15,33;CL:0000404,5.28e-15,33;CL:0000393,1.27e-12,39;CL:0000211,1.27e-12,39;CL:0002319,2.12e-11,43;CL:0000221,3.95e-11,44;CL:0000133,3.95e-11,44;CL:0002321,8.91e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!4.80e-16!6;UBERON:0002950!2.10e-11!4;UBERON:0001891!2.10e-11!4;UBERON:0009616!2.10e-11!4;UBERON:0004684!1.38e-09!3;UBERON:0002275!1.38e-09!3;UBERON:0002038!2.01e-09!3;UBERON:0002308!2.01e-09!3;UBERON:0009663!2.01e-09!3;UBERON:0009661!2.01e-09!3;UBERON:0006331!2.01e-09!3;UBERON:0000125!2.01e-09!3;UBERON:0001948!1.19e-08!5;UBERON:0002315!1.19e-08!5;UBERON:0000073!1.28e-08!75;UBERON:0001016!1.28e-08!75;UBERON:0003076!2.19e-07!12;UBERON:0003057!2.19e-07!12;UBERON:0002240!3.30e-07!6;UBERON:0005174!3.30e-07!6;UBERON:0001137!3.30e-07!6;UBERON:0001017!5.68e-07!73;UBERON:0005743!5.68e-07!73 | |ontology_enrichment_uberon=UBERON:0002298!4.80e-16!6;UBERON:0002950!2.10e-11!4;UBERON:0001891!2.10e-11!4;UBERON:0009616!2.10e-11!4;UBERON:0004684!1.38e-09!3;UBERON:0002275!1.38e-09!3;UBERON:0002038!2.01e-09!3;UBERON:0002308!2.01e-09!3;UBERON:0009663!2.01e-09!3;UBERON:0009661!2.01e-09!3;UBERON:0006331!2.01e-09!3;UBERON:0000125!2.01e-09!3;UBERON:0001948!1.19e-08!5;UBERON:0002315!1.19e-08!5;UBERON:0000073!1.28e-08!75;UBERON:0001016!1.28e-08!75;UBERON:0003076!2.19e-07!12;UBERON:0003057!2.19e-07!12;UBERON:0002240!3.30e-07!6;UBERON:0005174!3.30e-07!6;UBERON:0001137!3.30e-07!6;UBERON:0001017!5.68e-07!73;UBERON:0005743!5.68e-07!73 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.47e-25,3;UBERON:0002275,4.47e-25,3;UBERON:0002038,1.36e-24,3;UBERON:0009663,1.36e-24,3;UBERON:0009661,1.36e-24,3;UBERON:0000125,1.36e-24,3;UBERON:0002308,1.36e-24,3;UBERON:0002950,1.24e-18,4;UBERON:0001891,1.24e-18,4;UBERON:0009616,1.24e-18,4;UBERON:0010286,1.24e-18,4;UBERON:0002256,2.47e-16,2;UBERON:0002420,1.23e-09,8;UBERON:0007245,1.23e-09,8;UBERON:0010009,1.23e-09,8;UBERON:0010011,1.23e-09,8;UBERON:0000454,1.23e-09,8;UBERON:0000073,5.76e-09,54;UBERON:0001948,4.30e-07,5;UBERON:0002315,4.30e-07,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14260393761521,1.10434270475807,0,0,0,5.50579404996943,3.95830748064082,7.21950706304344,0,0,0,8.37548997004143,1.12552522006336,3.20876320331301,0.294628585473668,0.142371680799103,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,9.12888730856387,0.170430322578058,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.915001205637253,0,0,0.511430914660661,0,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14260393761521,1.10434270475807,0,0,0,5.50579404996943,3.95830748064082,7.21950706304344,0,0,0,8.37548997004143,1.12552522006336,3.20876320331301,0.294628585473668,0.142371680799103,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,9.12888730856387,0.170430322578058,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.915001205637253,0,0,0.511430914660661,0,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr9:44961019..44961022,+ | |short_description=p@chr9:44961019..44961022,+ | ||
}} | }} |
Latest revision as of 04:46, 5 August 2015
Short description: | p@chr9:44961019..44961022, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:44961019..44961022, + |
Coexpression cluster: | MCL_coexpression_mm9:503 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 4.47e-25 | 3 |
neuron of the substantia nigra | 1.36e-24 | 3 |
CNS neuron (sensu Vertebrata) | 1.04e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.04e-21 | 23 |
neuron of the dorsal spinal cord | 2.47e-16 | 2 |
neuron | 5.28e-15 | 33 |
neuronal stem cell | 5.28e-15 | 33 |
neuroblast | 5.28e-15 | 33 |
electrically signaling cell | 5.28e-15 | 33 |
electrically responsive cell | 1.27e-12 | 39 |
electrically active cell | 1.27e-12 | 39 |
neural cell | 2.12e-11 | 43 |
ectodermal cell | 3.95e-11 | 44 |
neurectodermal cell | 3.95e-11 | 44 |
embryonic cell | 8.91e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 4.47e-25 | 3 |
reticular formation | 4.47e-25 | 3 |
substantia nigra | 1.36e-24 | 3 |
telencephalic nucleus | 1.36e-24 | 3 |
midbrain nucleus | 1.36e-24 | 3 |
neural nucleus | 1.36e-24 | 3 |
nucleus of brain | 1.36e-24 | 3 |
regional part of midbrain | 1.24e-18 | 4 |
midbrain | 1.24e-18 | 4 |
presumptive midbrain | 1.24e-18 | 4 |
midbrain neural tube | 1.24e-18 | 4 |
dorsal horn of spinal cord | 2.47e-16 | 2 |
basal ganglion | 1.23e-09 | 8 |
nuclear complex of neuraxis | 1.23e-09 | 8 |
aggregate regional part of brain | 1.23e-09 | 8 |
collection of basal ganglia | 1.23e-09 | 8 |
cerebral subcortex | 1.23e-09 | 8 |
regional part of nervous system | 5.76e-09 | 54 |
regional part of spinal cord | 4.30e-07 | 5 |
gray matter of spinal cord | 4.30e-07 | 5 |