FFCP PHASE1:Hg19::chr17:28705921..28706000,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1362 | |EntrezGene=1362 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2301 | |HGNC=2301 | ||
|TSSclassifier=strong | |||
|UniProt=O75976 | |UniProt=O75976 | ||
|association_with_transcript=0bp_to_ENST00000225719,NM_001304,uc002hfb.1_5end | |association_with_transcript=0bp_to_ENST00000225719,NM_001304,uc002hfb.1_5end | ||
|cluster_id=chr17:28705921..28706000,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_CPD_5end | |description=CAGE_peak_1_at_CPD_5end | ||
|id=chr17:28705921..28706000,+ | |id=chr17:28705921..28706000,+ | ||
|ontology_enrichment_celltype=CL:0002057!9.05e-14!42;CL:0000860!3.36e-12!45;CL:0000766!2.03e-08!76;CL:0002194!1.94e-07!63;CL:0000576!1.94e-07!63;CL:0000040!1.94e-07!63;CL:0000559!1.94e-07!63;CL:0002009!1.94e-07!65 | |ontology_enrichment_celltype=CL:0002057!9.05e-14!42;CL:0000860!3.36e-12!45;CL:0000766!2.03e-08!76;CL:0002194!1.94e-07!63;CL:0000576!1.94e-07!63;CL:0000040!1.94e-07!63;CL:0000559!1.94e-07!63;CL:0002009!1.94e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.14e-16;33!CL:0002057;1.14e-16;33!CL:0000473;1.02e-11;39!CL:0000234;1.02e-11;39!CL:0000576;1.77e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.05e-14,42;CL:0002057,9.05e-14,42;CL:0000473,1.19e-11,48;CL:0000234,1.19e-11,48;CL:0000766,7.55e-09,72;CL:0002194,6.83e-08,59;CL:0000576,6.83e-08,59;CL:0000040,6.83e-08,59;CL:0000559,6.83e-08,59;CL:0002009,7.06e-08,61 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.47e-16!659;UBERON:0000480!4.64e-16!626;UBERON:0000467!9.21e-16!625;UBERON:0000062!4.29e-13!511;UBERON:0002050!6.29e-11!605;UBERON:0005423!6.29e-11!605;UBERON:0000923!6.86e-11!604;UBERON:0005291!6.86e-11!604;UBERON:0006598!6.86e-11!604;UBERON:0002532!6.86e-11!604;UBERON:0000922!1.06e-10!612;UBERON:0004111!5.41e-09!241;UBERON:0007023!1.71e-08!115;UBERON:0000477!2.52e-08!286;UBERON:0000926!1.05e-07!448;UBERON:0004120!1.05e-07!448;UBERON:0006603!1.05e-07!448;UBERON:0000025!3.76e-07!194 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005423,1.01e-11,581;UBERON:0000922,4.94e-11,592;UBERON:0002050,6.43e-11,564;UBERON:0000923,7.20e-11,560;UBERON:0010316,7.20e-11,560;UBERON:0005291,7.20e-11,560;UBERON:0006598,7.20e-11,560;UBERON:0010317,7.20e-11,560;UBERON:0002532,7.20e-11,560;UBERON:0004111,7.40e-09,240;UBERON:0007023,2.08e-08,114;UBERON:0011216,5.02e-07,223;UBERON:0000025,7.21e-07,192 | |||
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|short_description=p1@CPD | |short_description=p1@CPD | ||
}} | }} |
Latest revision as of 09:59, 19 September 2015
Short description: | p1@CPD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CPD_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000225719, NM_001304, uc002hfb.1_5end |
EntrezGene: | CPD |
HGNC: | 2301 |
UniProt: | O75976 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.05e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.05e-14 | 42 |
defensive cell | 1.19e-11 | 48 |
phagocyte | 1.19e-11 | 48 |
myeloid leukocyte | 7.55e-09 | 72 |
monopoietic cell | 6.83e-08 | 59 |
monocyte | 6.83e-08 | 59 |
monoblast | 6.83e-08 | 59 |
promonocyte | 6.83e-08 | 59 |
macrophage dendritic cell progenitor | 7.06e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
developing anatomical structure | 1.01e-11 | 581 |
embryo | 4.94e-11 | 592 |
embryonic structure | 6.43e-11 | 564 |
germ layer | 7.20e-11 | 560 |
germ layer / neural crest | 7.20e-11 | 560 |
embryonic tissue | 7.20e-11 | 560 |
presumptive structure | 7.20e-11 | 560 |
germ layer / neural crest derived structure | 7.20e-11 | 560 |
epiblast (generic) | 7.20e-11 | 560 |
anatomical conduit | 7.40e-09 | 240 |
adult organism | 2.08e-08 | 114 |
organ system subdivision | 5.02e-07 | 223 |
tube | 7.21e-07 | 192 |