FFCP PHASE1:Hg19::chr12:113828372..113828491,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:113828372..113828491,+ | |||
|coexpression_cluster_id=C660 | |||
|description=CAGE_peak_at_chr12:113828372..113828491,+ | |description=CAGE_peak_at_chr12:113828372..113828491,+ | ||
|id=chr12:113828372..113828491,+ | |id=chr12:113828372..113828491,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.73e-12!57;UBERON:0005068!2.73e-12!57;UBERON:0006241!2.73e-12!57;UBERON:0007135!2.73e-12!57;UBERON:0000062!3.56e-10!511;UBERON:0002616!5.84e-10!59;UBERON:0003080!8.02e-10!42;UBERON:0002780!8.99e-10!41;UBERON:0001890!8.99e-10!41;UBERON:0006240!8.99e-10!41;UBERON:0003075!2.75e-09!86;UBERON:0007284!2.75e-09!86;UBERON:0000955!5.65e-09!69;UBERON:0006238!5.65e-09!69;UBERON:0001017!9.44e-09!82;UBERON:0002020!1.16e-08!34;UBERON:0003528!1.16e-08!34;UBERON:0002346!2.26e-08!90;UBERON:0005743!2.84e-08!86;UBERON:0000468!4.43e-08!659;UBERON:0002791!1.90e-07!33;UBERON:0001869!2.25e-07!32;UBERON:0001893!2.50e-07!34;UBERON:0003056!4.48e-07!61;UBERON:0000073!7.76e-07!94;UBERON:0001016!7.76e-07!94 | |ontology_enrichment_uberon=UBERON:0001049!2.73e-12!57;UBERON:0005068!2.73e-12!57;UBERON:0006241!2.73e-12!57;UBERON:0007135!2.73e-12!57;UBERON:0000062!3.56e-10!511;UBERON:0002616!5.84e-10!59;UBERON:0003080!8.02e-10!42;UBERON:0002780!8.99e-10!41;UBERON:0001890!8.99e-10!41;UBERON:0006240!8.99e-10!41;UBERON:0003075!2.75e-09!86;UBERON:0007284!2.75e-09!86;UBERON:0000955!5.65e-09!69;UBERON:0006238!5.65e-09!69;UBERON:0001017!9.44e-09!82;UBERON:0002020!1.16e-08!34;UBERON:0003528!1.16e-08!34;UBERON:0002346!2.26e-08!90;UBERON:0005743!2.84e-08!86;UBERON:0000468!4.43e-08!659;UBERON:0002791!1.90e-07!33;UBERON:0001869!2.25e-07!32;UBERON:0001893!2.50e-07!34;UBERON:0003056!4.48e-07!61;UBERON:0000073!7.76e-07!94;UBERON:0001016!7.76e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.94e-07;41!UBERON:0001890;1.94e-07;41!UBERON:0003528;1.95e-07;34!UBERON:0002020;1.95e-07;34!UBERON:0000073;3.53e-07;53!UBERON:0002616;3.53e-07;53!UBERON:0002791;5.53e-07;32!UBERON:0001869;9.54e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.77e-12,56;UBERON:0005068,2.77e-12,56;UBERON:0006241,2.77e-12,56;UBERON:0007135,2.77e-12,56;UBERON:0000073,3.05e-11,53;UBERON:0002616,3.05e-11,53;UBERON:0002780,8.22e-10,41;UBERON:0001890,8.22e-10,41;UBERON:0003080,8.22e-10,41;UBERON:0006240,8.22e-10,41;UBERON:0003075,1.57e-09,82;UBERON:0007284,1.57e-09,82;UBERON:0000955,6.77e-09,68;UBERON:0006238,6.77e-09,68;UBERON:0001017,9.94e-09,81;UBERON:0003528,1.07e-08,34;UBERON:0002020,1.07e-08,34;UBERON:0002346,1.56e-08,86;UBERON:0002791,1.13e-07,32;UBERON:0010371,1.25e-07,104;UBERON:0001869,2.11e-07,32;UBERON:0001893,2.35e-07,34;UBERON:0001016,3.78e-07,89 | |||
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| ||
|short_description=p@chr12:113828372..113828491,+ | |short_description=p@chr12:113828372..113828491,+ | ||
}} | }} |
Latest revision as of 05:14, 24 July 2015
Short description: | p@chr12:113828372..113828491, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:113828372..113828491, + |
Coexpression cluster: | C660_Monocytederived_liposarcoma_Smooth_Synoviocyte_pituitary_Chondrocyte_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.77e-12 | 56 |
neural rod | 2.77e-12 | 56 |
future spinal cord | 2.77e-12 | 56 |
neural keel | 2.77e-12 | 56 |
regional part of nervous system | 3.05e-11 | 53 |
regional part of brain | 3.05e-11 | 53 |
regional part of forebrain | 8.22e-10 | 41 |
forebrain | 8.22e-10 | 41 |
anterior neural tube | 8.22e-10 | 41 |
future forebrain | 8.22e-10 | 41 |
neural plate | 1.57e-09 | 82 |
presumptive neural plate | 1.57e-09 | 82 |
brain | 6.77e-09 | 68 |
future brain | 6.77e-09 | 68 |
central nervous system | 9.94e-09 | 81 |
brain grey matter | 1.07e-08 | 34 |
gray matter | 1.07e-08 | 34 |
neurectoderm | 1.56e-08 | 86 |
regional part of telencephalon | 1.13e-07 | 32 |
ecto-epithelium | 1.25e-07 | 104 |
cerebral hemisphere | 2.11e-07 | 32 |
telencephalon | 2.35e-07 | 34 |
nervous system | 3.78e-07 | 89 |