FFCP PHASE1:Hg19::chr17:48267707..48267746,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48267707..48267746,- | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48267707..48267746,- | |description=CAGE_peak_at_chr17:48267707..48267746,- | ||
|id=chr17:48267707..48267746,- | |id=chr17:48267707..48267746,- | ||
|ontology_enrichment_celltype=CL:0000055!8.71e-37!180;CL:0000057!1.29e-22!75;CL:0000183!1.91e-16!59;CL:0000680!4.07e-16!57;CL:0000056!4.07e-16!57;CL:0000355!4.07e-16!57;CL:0000187!3.58e-15!54;CL:0000048!1.91e-13!430;CL:0000393!1.55e-12!60;CL:0000211!1.55e-12!60;CL:0000723!1.90e-12!436;CL:0000034!1.87e-11!444;CL:0000192!2.93e-11!42;CL:0000514!2.93e-11!42;CL:0002371!3.76e-08!591;CL:0000499!4.21e-08!27;CL:0002334!4.42e-08!12;CL:0000144!1.30e-07!625;CL:0000359!2.02e-07!32;CL:0002620!2.16e-07!23;CL:0000222!5.22e-07!119 | |ontology_enrichment_celltype=CL:0000055!8.71e-37!180;CL:0000057!1.29e-22!75;CL:0000183!1.91e-16!59;CL:0000680!4.07e-16!57;CL:0000056!4.07e-16!57;CL:0000355!4.07e-16!57;CL:0000187!3.58e-15!54;CL:0000048!1.91e-13!430;CL:0000393!1.55e-12!60;CL:0000211!1.55e-12!60;CL:0000723!1.90e-12!436;CL:0000034!1.87e-11!444;CL:0000192!2.93e-11!42;CL:0000514!2.93e-11!42;CL:0002371!3.76e-08!591;CL:0000499!4.21e-08!27;CL:0002334!4.42e-08!12;CL:0000144!1.30e-07!625;CL:0000359!2.02e-07!32;CL:0002620!2.16e-07!23;CL:0000222!5.22e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.09e-12;55!CL:0000723;1.01e-11;61!CL:0000048;2.00e-11;58!CL:0002320;6.93e-10;188!CL:0000499;1.98e-09;28!CL:0002334;8.76e-09;12!CL:0000057;9.85e-09;73!CL:0000327;1.87e-08;15!CL:0000034;2.84e-08;69!CL:0002570;1.20e-07;8!CL:0002620;5.68e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.96e-22,76;CL:0000048,9.74e-19,427;CL:0000723,8.22e-18,433;CL:0000034,1.26e-16,441;CL:0002320,1.42e-11,361;CL:0000680,2.57e-11,58;CL:0000056,2.57e-11,58;CL:0000355,2.57e-11,58;CL:0000187,7.82e-11,55;CL:0000134,2.21e-10,354;CL:0000499,1.90e-09,28;CL:0002334,8.86e-09,12;CL:0000393,9.36e-09,61;CL:0000211,9.36e-09,61;CL:0000327,2.30e-08,15;CL:0000219,4.27e-08,386;CL:0002570,1.12e-07,8;CL:0000192,1.15e-07,43;CL:0000514,1.15e-07,43;CL:0002620,5.60e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;9.79e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.78e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.18e-18!83;UBERON:0002329!7.18e-18!83;UBERON:0003077!7.18e-18!83;UBERON:0003059!7.18e-18!83;UBERON:0007282!7.18e-18!83;UBERON:0009618!7.18e-18!83;UBERON:0007285!7.18e-18!83;UBERON:0001134!3.02e-16!61;UBERON:0002036!3.02e-16!61;UBERON:0003082!3.02e-16!61;UBERON:0004290!5.82e-16!70;UBERON:0002385!8.42e-16!63;UBERON:0001015!8.42e-16!63;UBERON:0000383!8.42e-16!63;UBERON:0005256!4.92e-13!143;UBERON:0000486!3.60e-12!82;UBERON:0002100!5.48e-09!216;UBERON:0001013!1.26e-08!14;UBERON:0004872!6.79e-08!84;UBERON:0002199!7.00e-07!45;UBERON:0002416!7.00e-07!45;UBERON:0000475!7.32e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;2.16e-09;198!UBERON:0001013;1.24e-08;14!UBERON:0003688;2.22e-07;6!UBERON:0002358;2.22e-07;6!UBERON:0003684;2.22e-07;6!UBERON:0001178;2.22e-07;6!UBERON:0004457;4.40e-07;9!UBERON:0000042;4.40e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,6.67e-12,62;UBERON:0002036,6.67e-12,62;UBERON:0003082,6.67e-12,62;UBERON:0002384,1.15e-11,371;UBERON:0007524,1.87e-11,73;UBERON:0002385,3.72e-11,64;UBERON:0001015,3.72e-11,64;UBERON:0000383,3.72e-11,64;UBERON:0002329,3.77e-11,71;UBERON:0003059,3.77e-11,71;UBERON:0007282,3.77e-11,71;UBERON:0004290,3.77e-11,71;UBERON:0009618,3.77e-11,71;UBERON:0007503,6.92e-11,78;UBERON:0003077,8.04e-11,72;UBERON:0007285,8.04e-11,72;UBERON:0005256,6.81e-10,122;UBERON:0000486,5.27e-09,83;UBERON:0001013,9.65e-09,14;UBERON:0003104,1.21e-08,160;UBERON:0009142,1.21e-08,160;UBERON:0003688,2.28e-07,6;UBERON:0002358,2.28e-07,6;UBERON:0003684,2.28e-07,6;UBERON:0001178,2.28e-07,6 | |||
|phase1_expression=7.99384868790449,10.4909256706582,12.6858963686374,7.00513088471913,19.2193270603734,10.4680622892044,10.1319951267324,1.89515962028049,0.522371256399677,0.982935746006035,0,0.218441372130172,5.01157258634062,1.48519623552056,0.994192127183747,0,1.20538905604795,0.730310090387373,0.487932798790507,1.23121058076788,5.10001728110633,2.82109249330279,0.286235987131057,0.273748850145768,0.87879847716362,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,1.66221330396589,3.61439152384566,13.536123587169,7.53201898596283,6.36228757640879,10.705967146658,0.378139268656271,2.88248216701333,1.84453049955565,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,18.8849341644221,7.21793916488105,1.98613771219828,28.6836620748814,6.38403087957043,2.24271040056923,5.33744978648525,7.89336154934912,1.8672662123986,1.34710672069688,0.490385709340376,3.93529311876822,2.88087962239999,0.234321431833797,0,0,2.09228152772521,0.117434498643765,0.161872944368132,0.140450806702248,0.816616685019573,0.737005903870608,1.13658359293342,20.1960485737949,28.1884299377555,2.73048408581408,12.2165084108761,0.336672227908132,0.750711119231785,0,6.14568669233173,8.58165828237255,12.3195208303409,1.36118619792025,5.02290979928813,9.61008249683553,6.99375273826554,4.80145753735044,4.225153698776,4.12224864073007,7.63079110959518,3.88185564154912,4.48210223741514,3.5340728394176,4.51044503347267,7.75901072730297,6.03516307278244,2.41805035746337,1.86516651541536,0,0,0,0,0,0,0.207322110030741,0,0,4.69348596989448,4.5026865673502,0,0.464367928031979,0.721879481669586,0,0,0.241011029883482,0,0,0,0.134831308160164,0.196221465125346,0,0,8.41450642820675,10.289350283285,11.7606969108434,0,0,0,0,0,1.02940686179115,0,0,0,0,0,0,0,0,0.939269553886573,0,0.462985512576611,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0.102827492703324,0,0,1.23344192779897,2.61576041299968,1.24675085895615,3.10252117818667,10.7296933755565,4.22651376278,6.64845291462176,7.28052058379563,2.05765899409714,2.83698264046557,2.1313774321288,4.57529579706072,18.4491345833091,3.29296134712308,2.60588947434988,6.04166312862328,0.791951872933429,1.20575750823834,0,0.799783929456456,0,0,0,8.38686994220539,28.7154839585285,1.42636905040718,1.88215698667853,4.10952645100767,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,1.34960640891054,2.00068208423871,0.271265023699736,24.9565033836969,23.5526265212254,13.0893004478166,4.21709093973768,7.52365249319297,22.7407504055985,2.0694614258501,1.99267679560631,4.97796755062599,1.91143951829782,5.286631251494,12.6963066810017,0,0,0,0.303127571446259,6.65741758041988,4.5358543999452,12.4053903909388,5.83155498494637,40.6957136927957,21.9117945227249,5.62877973973374,34.422739124732,11.8734453155993,0.616838775210622,5.32685175939381,1.39616165223476,2.07701771673448,1.74315567689939,0,0,0,4.59257792658427,5.46273504020151,9.17870904715969,0,0,0,0,0.105551628892876,0,0,0.431831832204279,1.54227252690289,1.62567862526312,2.50844886927427,0,0,0.223874754722178,0,0,0,0,0,0.309123034943167,2.28923662045859,0.495056999523528,1.72279661398852,0.650060246036521,14.4615536859744,1.35339005608971,0.462145851343933,1.68854042198743,0.964856007391714,2.36324538710202,4.49551751134108,1.27839941124151,9.34836374290742,0.495854746082934,0.384380134730212,0.127612712494584,0.2023155617111,0,13.8517432605482,0.6970372701606,2.7723022215848,0.532306030317022,0.869932992075073,0.9266210955196,1.14499909393593,1.48863347743867,0.316379424718726,5.71890581771475,1.79128453917934,1.71175595213568,2.54562598340749,6.27958912159384,1.43897966066652,7.68703683260953,4.47687128913608,0.404364963146632,0,2.10629228119491,2.43816869544795,1.46228093778771,1.05650146756755,1.63799893689583,14.281948627325,4.52032466480971,1.10273068709225,0.66343897524122,0.438450885253763,5.20897980840019,3.9353685122798,1.21746226177622,1.239293992399,1.69017361519345,1.86434757865267,1.96498082026242,1.78335525740625,0.354761064070598,2.74439925886963,2.30506425071931,0.75894634753143,2.0996083214699,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,8.70910845453061,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,2.46240827212151,0.227884111694002,0,0,0.108647371922008,0.31900115973192,4.03029410968194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4441205797345,0,0,0,0,10.4335094148843,0,0,0,0,0,7.25944296291983,0,0.379119477770928,0,0,0,0,0,0,0,0.138674673013139,0,0,0,1.92199335066233,0.171986032471617,0,0.0730893170861856,0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| ||
|short_description=p@chr17:48267707..48267746,- | |short_description=p@chr17:48267707..48267746,- | ||
}} | }} |
Latest revision as of 18:35, 25 July 2015
Short description: | p@chr17:48267707..48267746, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48267707..48267746, - |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.96e-22 | 76 |
multi fate stem cell | 9.74e-19 | 427 |
somatic stem cell | 8.22e-18 | 433 |
stem cell | 1.26e-16 | 441 |
connective tissue cell | 1.42e-11 | 361 |
muscle precursor cell | 2.57e-11 | 58 |
myoblast | 2.57e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.57e-11 | 58 |
muscle cell | 7.82e-11 | 55 |
mesenchymal cell | 2.21e-10 | 354 |
stromal cell | 1.90e-09 | 28 |
preadipocyte | 8.86e-09 | 12 |
electrically responsive cell | 9.36e-09 | 61 |
electrically active cell | 9.36e-09 | 61 |
extracellular matrix secreting cell | 2.30e-08 | 15 |
motile cell | 4.27e-08 | 386 |
mesenchymal stem cell of adipose | 1.12e-07 | 8 |
smooth muscle cell | 1.15e-07 | 43 |
smooth muscle myoblast | 1.15e-07 | 43 |
skin fibroblast | 5.60e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 6.67e-12 | 62 |
striated muscle tissue | 6.67e-12 | 62 |
myotome | 6.67e-12 | 62 |
connective tissue | 1.15e-11 | 371 |
dense mesenchyme tissue | 1.87e-11 | 73 |
muscle tissue | 3.72e-11 | 64 |
musculature | 3.72e-11 | 64 |
musculature of body | 3.72e-11 | 64 |
somite | 3.77e-11 | 71 |
presomitic mesoderm | 3.77e-11 | 71 |
presumptive segmental plate | 3.77e-11 | 71 |
dermomyotome | 3.77e-11 | 71 |
trunk paraxial mesoderm | 3.77e-11 | 71 |
epithelial vesicle | 6.92e-11 | 78 |
paraxial mesoderm | 8.04e-11 | 72 |
presumptive paraxial mesoderm | 8.04e-11 | 72 |
trunk mesenchyme | 6.81e-10 | 122 |
multilaminar epithelium | 5.27e-09 | 83 |
adipose tissue | 9.65e-09 | 14 |
mesenchyme | 1.21e-08 | 160 |
entire embryonic mesenchyme | 1.21e-08 | 160 |
omentum | 2.28e-07 | 6 |
peritoneum | 2.28e-07 | 6 |
abdominal cavity | 2.28e-07 | 6 |
visceral peritoneum | 2.28e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.78e-08 | 14 |