FFCP PHASE1:Hg19::chr12:6972713..6972718,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:6972713..6972718,- | |||
|description=CAGE_peak_at_chr12:6972713..6972718,- | |description=CAGE_peak_at_chr12:6972713..6972718,- | ||
|id=chr12:6972713..6972718,- | |id=chr12:6972713..6972718,- | ||
|ontology_enrichment_celltype=CL:0000188!7.42e-07!9 | |ontology_enrichment_celltype=CL:0000188!7.42e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000054;1.78e-09;2!CL:0000137;1.78e-09;2!CL:0000092;1.78e-09;2!CL:0000632;8.15e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,1.86e-09,2;CL:0000137,1.86e-09,2;CL:0000092,1.86e-09,2;CL:0000632,7.70e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;7.37e-18;1 | |||
|ontology_enrichment_disease=DOID:162!1.40e-18!235;DOID:14566!9.27e-18!239;DOID:0050687!1.96e-14!143;DOID:1115!8.65e-08!20;DOID:305!1.49e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:201;5.37e-12;6!DOID:0060100;5.37e-12;6!DOID:3307;7.98e-10;2!DOID:4231;9.87e-10;2!DOID:1907;9.87e-10;2!DOID:200;1.78e-09;2!DOID:4305;1.78e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:201,5.68e-12,6;DOID:0060100,5.68e-12,6;DOID:3307,7.98e-10,2;DOID:4231,1.03e-09,2;DOID:1907,1.03e-09,2;DOID:200,1.86e-09,2;DOID:4305,1.86e-09,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;3.16e-18;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,3.16e-18,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.352303495931295,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0.30648779579902,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0.307007349452259,0.964856007391714,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0.329607748453519,0.211125408127993,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0.511572370226872,0,0,5.55684950723184,0,0,0,0,0,0,0.227586896570999,0,0.236387681767936,0.689486746482929,1.45802306691627,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0.19606253431774,0,0,0.317873157960757,0,0,0,0,0,0,0,0.593042257361244,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0.664653872707185,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0,0,0,0,0,0.685209623233754,0.397429223405979,0,0,0.400794101257669,0,0,0.72045208577053,0,0,0,0,0,0,0.418411385249333,0,0.288950589901519,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0,0,0,0,0.76280561296425,0,0,0,0,0.246277562248017,3.06698439213759,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0.597019211547496,0,0,0.947015026375446,0.251567901752575,0,0.228840068396924,0,0.310874401165561,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0.363697318405119,0,0,0,2.00013882331577,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0.422624246717254,0,0.106691729694141,0,4.54012762853469,0,0,0,0,0.107824811396682,0.314531883711793,0,0,0.212574920101683,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0.366857197043358,0.577628330751691,1.1441462864015,0,0,0,0.40341013740704,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,1.05522746615772,0,0,0,0,0,0,0.230467975111559,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.116241425368125,0.173858272302579,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.397901550322736,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0.199882311849858,0.178553938605658,4.58763333230399,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0.534434810531121,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,7.7228912914776,0.179650404213174,2.34640942403454,0,0,0,0,0 | ||
|short_description=p@chr12:6972713..6972718,- | |short_description=p@chr12:6972713..6972718,- | ||
}} | }} |
Latest revision as of 11:52, 24 July 2015
Short description: | p@chr12:6972713..6972718, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:6972713..6972718, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 1.86e-09 | 2 |
osteocyte | 1.86e-09 | 2 |
osteoclast | 1.86e-09 | 2 |
hepatic stellate cell | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 3.16e-18 | 1 |
Ontology term | p-value | n |
---|---|---|
connective tissue cancer | 5.68e-12 | 6 |
musculoskeletal system cancer | 5.68e-12 | 6 |
teratoma | 7.98e-10 | 2 |
histiocytoma | 1.03e-09 | 2 |
malignant fibroxanthoma | 1.03e-09 | 2 |
giant cell tumor | 1.86e-09 | 2 |
bone giant cell tumor | 1.86e-09 | 2 |