FFCP PHASE1:Hg19::chr12:80838145..80838152,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9679 | |HGNC=9679 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=197bp_to_ENST00000526956_5end | |association_with_transcript=197bp_to_ENST00000526956_5end | ||
|cluster_id=chr12:80838145..80838152,+ | |||
|coexpression_cluster_id=C161 | |||
|description=CAGE_peak_9_at_PTPRQ_5end | |description=CAGE_peak_9_at_PTPRQ_5end | ||
|id=chr12:80838145..80838152,+ | |id=chr12:80838145..80838152,+ | ||
|ontology_enrichment_celltype=CL:0002504!9.94e-18!3;CL:1000279!9.94e-18!3;CL:1000280!9.94e-18!3;CL:0002097!9.25e-08!2 | |ontology_enrichment_celltype=CL:0002504!9.94e-18!3;CL:1000279!9.94e-18!3;CL:1000280!9.94e-18!3;CL:0002097!9.25e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002097;2.74e-50;2!CL:0000174;4.27e-34;3!CL:0000138;9.07e-18;6!CL:0000150;2.19e-12;9!CL:0000163;2.19e-12;9!CL:0000153;2.45e-12;9!CL:0000447;2.45e-12;9!CL:0000151;1.70e-11;36!CL:0000327;5.93e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,2.74e-50,2;CL:0000174,4.27e-34,3;CL:0000058,9.07e-18,6;CL:0000138,9.07e-18,6;CL:0000150,2.19e-12,9;CL:0000163,2.19e-12,9;CL:0000153,2.45e-12,9;CL:0000447,2.45e-12,9;CL:0000151,2.91e-12,36;CL:0000327,5.93e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!3.50e-14!1;DOID:4549!3.50e-14!1;DOID:5861!3.50e-14!1;DOID:6496!3.50e-14!1 | |ontology_enrichment_disease=DOID:3371!3.50e-14!1;DOID:4549!3.50e-14!1;DOID:5861!3.50e-14!1;DOID:6496!3.50e-14!1 | ||
|ontology_enrichment_disease_v019=DOID:3371;2.55e-98;1!DOID:4549;2.55e-98;1!DOID:5861;2.55e-98;1!DOID:6496;2.55e-98;1!DOID:170;7.67e-18;6!DOID:201;9.07e-18;6!DOID:0060100;9.07e-18;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.55e-98,1;DOID:4549,2.55e-98,1;DOID:5861,2.55e-98,1;DOID:6496,2.55e-98,1;DOID:170,7.67e-18,6;DOID:201,9.07e-18,6;DOID:0060100,9.07e-18,6 | |||
|ontology_enrichment_uberon=UBERON:0005383!2.71e-17!3;UBERON:0005382!2.71e-17!3;UBERON:0000029!3.98e-14!1;UBERON:0001874!1.10e-13!1;UBERON:0000369!3.21e-13!4;UBERON:0002435!3.21e-13!4;UBERON:0000204!3.21e-13!4;UBERON:0010082!3.21e-13!4;UBERON:0009663!6.08e-08!7;UBERON:0001873!2.12e-07!2;UBERON:0010122!2.12e-07!2 | |ontology_enrichment_uberon=UBERON:0005383!2.71e-17!3;UBERON:0005382!2.71e-17!3;UBERON:0000029!3.98e-14!1;UBERON:0001874!1.10e-13!1;UBERON:0000369!3.21e-13!4;UBERON:0002435!3.21e-13!4;UBERON:0000204!3.21e-13!4;UBERON:0010082!3.21e-13!4;UBERON:0009663!6.08e-08!7;UBERON:0001873!2.12e-07!2;UBERON:0010122!2.12e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;4.27e-34;3!UBERON:0001235;4.27e-34;3!UBERON:0006858;4.27e-34;3!UBERON:0002418;5.96e-34;3!UBERON:0004755;5.96e-34;3!UBERON:0001851;5.55e-08;15!UBERON:0001474;7.60e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,4.27e-34,3;UBERON:0001235,4.27e-34,3;UBERON:0006858,4.27e-34,3;UBERON:0002418,5.96e-34,3;UBERON:0004755,5.96e-34,3;UBERON:0001851,5.55e-08,15 | |||
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|short_description=p9@PTPRQ | |short_description=p9@PTPRQ | ||
}} | }} |
Latest revision as of 01:16, 25 September 2015
Short description: | p9@PTPRQ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PTPRQ_5end |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | 197bp_to_ENST00000526956_5end |
EntrezGene: | NA |
HGNC: | 9679 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 2.74e-50 | 2 |
steroid hormone secreting cell | 4.27e-34 | 3 |
chondroblast | 9.07e-18 | 6 |
chondrocyte | 9.07e-18 | 6 |
glandular epithelial cell | 2.19e-12 | 9 |
endocrine cell | 2.19e-12 | 9 |
GAG secreting cell | 2.45e-12 | 9 |
carbohydrate secreting cell | 2.45e-12 | 9 |
secretory cell | 2.91e-12 | 36 |
extracellular matrix secreting cell | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 4.27e-34 | 3 |
adrenal cortex | 4.27e-34 | 3 |
adrenal/interrenal gland | 4.27e-34 | 3 |
cartilage tissue | 5.96e-34 | 3 |
skeletal tissue | 5.96e-34 | 3 |
cortex | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.55e-98 | 1 |
extraosseous chondrosarcoma | 2.55e-98 | 1 |
myxoid chondrosarcoma | 2.55e-98 | 1 |
extraskeletal myxoid chondrosarcoma | 2.55e-98 | 1 |
endocrine gland cancer | 7.67e-18 | 6 |
connective tissue cancer | 9.07e-18 | 6 |
musculoskeletal system cancer | 9.07e-18 | 6 |