FFCP PHASE1:Hg19::chr18:55470413..55470441,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5205 | |EntrezGene=5205 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3706 | |HGNC=3706 | ||
|TSSclassifier=strong | |||
|UniProt=O43520 | |UniProt=O43520 | ||
|association_with_transcript=-86bp_to_ENST00000536015,NM_005603_5end | |association_with_transcript=-86bp_to_ENST00000536015,NM_005603_5end | ||
|cluster_id=chr18:55470413..55470441,- | |||
|coexpression_cluster_id=C3730 | |||
|description=CAGE_peak_3_at_ATP8B1_5end | |description=CAGE_peak_3_at_ATP8B1_5end | ||
|id=chr18:55470413..55470441,- | |id=chr18:55470413..55470441,- | ||
|ontology_enrichment_celltype=CL:0000066!3.83e-15!254;CL:0002076!1.11e-10!43;CL:0000223!7.32e-09!59 | |ontology_enrichment_celltype=CL:0000066!3.83e-15!254;CL:0002076!1.11e-10!43;CL:0000223!7.32e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.92e-12;42!CL:0002251;1.31e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.35e-15,42;CL:0000223,9.00e-13,58;CL:0000066,1.45e-12,253;CL:0002251,9.20e-10,20 | |||
|ontology_enrichment_development_v019=UBERON:0006595;9.30e-08;86!CL:0000223;4.29e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!1.25e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.39e-13;14!DOID:299;9.62e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.51e-14,106;DOID:1749,9.47e-14,14;DOID:0050687,8.41e-13,143;DOID:299,7.95e-10,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.02e-20!169;UBERON:0000925!1.02e-20!169;UBERON:0006595!1.02e-20!169;UBERON:0001007!4.10e-16!155;UBERON:0001555!4.10e-16!155;UBERON:0007026!4.10e-16!155;UBERON:0000161!2.33e-11!35;UBERON:0000468!5.74e-11!659;UBERON:0000077!9.83e-11!130;UBERON:0004921!1.54e-10!129;UBERON:0004185!1.54e-10!129;UBERON:0003102!2.47e-09!95;UBERON:0005911!3.71e-09!82;UBERON:0000464!2.85e-08!104;UBERON:0001004!3.98e-08!72;UBERON:0000915!4.71e-08!52;UBERON:0000467!6.15e-08!625;UBERON:0000480!8.42e-08!626;UBERON:0000466!1.04e-07!126;UBERON:0001046!2.06e-07!19;UBERON:0000475!2.84e-07!365;UBERON:0005156!3.55e-07!59;UBERON:0000990!3.55e-07!59;UBERON:0000166!3.60e-07!21;UBERON:0000165!4.36e-07!28;UBERON:0000930!4.36e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.10e-15;33!UBERON:0005409;2.90e-12;22!UBERON:0000160;1.33e-10;17!UBERON:0001555;1.60e-10;54!UBERON:0005631;5.74e-08;10!UBERON:0000158;5.74e-08;10!UBERON:0002294;7.70e-08;7!UBERON:0001173;7.70e-08;7!UBERON:0000974;1.14e-07;6!UBERON:0001007;4.39e-07;81!UBERON:0000161;4.46e-07;19!UBERON:0000166;4.46e-07;19!UBERON:0000305;7.04e-07;7!UBERON:0000344;8.29e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.97e-23,160;UBERON:0000925,2.97e-23,160;UBERON:0006595,2.97e-23,160;UBERON:0001007,1.08e-19,145;UBERON:0001555,1.08e-19,145;UBERON:0007026,1.08e-19,145;UBERON:0004921,6.63e-16,118;UBERON:0000161,8.89e-12,36;UBERON:0000160,9.21e-11,17;UBERON:0005409,1.92e-10,25;UBERON:0001046,1.98e-08,19;UBERON:0001004,2.67e-08,74;UBERON:0000166,3.15e-08,22;UBERON:0005911,3.22e-08,82;UBERON:0005631,3.50e-08,14;UBERON:0000158,3.50e-08,14;UBERON:0000344,5.30e-07,20;UBERON:0000305,9.13e-07,7 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.737201809504527,0.697801167972428,1.96597234917155,1.05506791291381,0.123766352960047,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0.795285947051099,0,0,0.221729397462564,0.087834785693126,0.458426764241994,0,1.85392221392215,0,0,0,0,0,0,0.79504962946682,0.860234595106124,0,0,1.67799774483962,0,0.835979866147242,0,0.71153252537342,0.33472061276467,0.805658634218294,0.760272105718513,0.732186172644509,0.367663080345869,0.81014194788176,0.892997282840798,0.44905874525234,0.788280363383256,0,0,0.549605231791222,0,0,1.3082821564276,1.49091585508596,0.759783069987479,3.31022952033047,2.0078563452417,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0,0,0.576175924479999,0,0.624320153660641,0,0.747243402759005,0,0.485618833104395,0,0.408308342509787,0.368502951935304,0.309977343527296,0,0.494533858557114,0,0,0.168336113954066,0,1.38532057742091,0,0.919463387397059,0.600952235626387,0,0.717558542755448,0,0.635795703478686,0.600182192168805,0.309157587715317,0.515281080091258,1.48893485065272,0.843881661206331,0.68205903612839,0.252433774244115,0.644349290496095,0.161646056818812,2.13005755509969,0.403008392910561,0.508681776931463,1.15956511897978,1.63647672354501,1.14721838155602,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,1.18157981336281,0,1.72183813960359,0,0.219500570817251,1.1240175325762,0.402115889646523,0.740707561268237,0,0,0,0,0,0.577465791044295,0.462985512576611,0.380508304469197,3.1608175918371,1.71697232418975,0,0,0,0.93733833986777,2.35174979478403,1.27597587518148,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.387815147273333,0,0,1.06375246633948,0,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,0.718874566474748,1.14861935834114,4.27910715122155,0.434343920002738,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.45579603071565,0.892144943985809,0.788512075169673,0.35142424497814,0.300946099727719,0,1.03473071292505,0,0,0.695068915744663,0,0,0,0,0,0.303127571446259,4.99306318531491,0.604780586659361,0.496215615637554,0.306923946576125,0.561320188866147,0.128139149255701,0.511707249066704,0.160853921143607,0,0.925258162815933,0.355123450626254,0.164254312027618,0,0.232420756919918,1.0877350463246,1.00253235151642,2.30202472339741,0.229628896329213,0.182091168006717,0.393373244878272,1.35359883872224,1.23224539367064,0,0,0.211103257785751,1.13733384070897,0.680374821106063,0.863663664408557,0,0,0,1.52925763827023,2.49322802678617,0,0,0,0,0,0,0.824328093181778,0,0,0.574265537996172,1.95018073810956,0,0,0,0,0.137836572484531,0.214840489736547,0.145016693914229,0.0852266274161009,0.0890320356467374,2.14870389969272,0.768760269460425,1.53135254993501,2.32662895967765,0.464845549297286,0.31481234683064,0,0.616067160352178,0,0,0.18532421910392,0.429374660225974,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0.404364963146632,1.58510321173008,0.421258456238981,0,0,1.05650146756755,0.682499557039929,0.141405431953713,1.13008116620243,0,0.66343897524122,0.876901770507525,0,0.655894752046633,0.608731130888112,0,0,0,0,0,0.354761064070598,0.422215270595328,0.329294892959902,0.379473173765715,0.349934720244983,0.865999014529609,1.34060455107157,1.08890984861323,0.753150406214233,0.86101074534246,1.68471475667626,3.10401107475673,1.83778720165568,0,0,0,0,0,0,0,0.79312517629427,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,3.36852972734796,0.293016358543788,0,0,0,8.35605696581915,3.8605408508243,6.14321404198464,0,0,0.556543525114529,0,0,1.39473591775749,4.97311047956066,0.503865495708552,0,0.123084805461069,0.311039587661807,2.87578723671446,3.40140231883657,0,10.456200997515,0,1.11136990144637,0,0.0927680981618513,0,2.86470537193757,5.59743999975653,0.724999575434793,1.70690172428249,2.03402920234213,2.12748913591143,0,0,0,0,0,0,0,0,0,0,2.78847488557207,2.00070672109872,0.227884111694002,2.07507513949254,4.21860928725929,13.472274118329,2.55200927785536,0.457987967009312,2.66517388009317,0,0,0,0,0,0,0,0,0,3.4278889713421,2.54435528581093,0,22.8910244148056,12.2071439014608,29.329446956814,0.296521128680622,0,0,0.202203398942031,0.802577647298789,0,0,5.6742739490306,0,0.789168805698781,3.62972148145992,0.30607276163049,0.442306057399416,0,0,0,0,0,0,1.13843818411917,0.138674673013139,5.90103110339445,5.78155144744828,2.08942095792966,1.7472666824203,1.37588825977293,0,0,0,3.39461557709468,0,0.90392296312213,0.274083849293502,0,0.063310795955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| ||
|short_description=p3@ATP8B1 | |short_description=p3@ATP8B1 | ||
}} | }} |
Latest revision as of 22:59, 19 September 2015
Short description: | p3@ATP8B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATP8B1_5end |
Coexpression cluster: | C3730_colon_stomach_pancreas_salivary_parotid_rectum_small |
Association with transcript: | -86bp_to_ENST00000536015, NM_005603_5end |
EntrezGene: | ATP8B1 |
HGNC: | 3706 |
UniProt: | O43520 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 7.35e-15 | 42 |
endodermal cell | 9.00e-13 | 58 |
epithelial cell | 1.45e-12 | 253 |
epithelial cell of alimentary canal | 9.20e-10 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.97e-23 | 160 |
endoderm | 2.97e-23 | 160 |
presumptive endoderm | 2.97e-23 | 160 |
digestive system | 1.08e-19 | 145 |
digestive tract | 1.08e-19 | 145 |
primitive gut | 1.08e-19 | 145 |
subdivision of digestive tract | 6.63e-16 | 118 |
orifice | 8.89e-12 | 36 |
intestine | 9.21e-11 | 17 |
gastrointestinal system | 1.92e-10 | 25 |
hindgut | 1.98e-08 | 19 |
respiratory system | 2.67e-08 | 74 |
oral opening | 3.15e-08 | 22 |
endo-epithelium | 3.22e-08 | 82 |
extraembryonic membrane | 3.50e-08 | 14 |
membranous layer | 3.50e-08 | 14 |
mucosa | 5.30e-07 | 20 |
amnion | 9.13e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.51e-14 | 106 |
squamous cell carcinoma | 9.47e-14 | 14 |
cell type cancer | 8.41e-13 | 143 |
adenocarcinoma | 7.95e-10 | 25 |