FFCP PHASE1:Hg19::chr18:61254622..61254641,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5275 | |EntrezGene=5275 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8944 | |HGNC=8944 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000479842_5end | |association_with_transcript=0bp_to_ENST00000479842_5end | ||
|cluster_id=chr18:61254622..61254641,+ | |||
|coexpression_cluster_id=C820 | |||
|description=CAGE_peak_1_at_SERPINB13_5end | |description=CAGE_peak_1_at_SERPINB13_5end | ||
|id=chr18:61254622..61254641,+ | |id=chr18:61254622..61254641,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.28e-24!43;CL:0000223!2.55e-17!59;CL:0002159!1.59e-15!13;CL:0002251!5.44e-15!21;CL:0002368!3.47e-14!13;CL:0000622!1.75e-11!5;CL:0000066!1.98e-11!254;CL:0000154!1.76e-09!6;CL:0000244!4.25e-09!4;CL:0000731!4.25e-09!4;CL:0000076!7.34e-09!62;CL:0002077!3.45e-08!33;CL:0002202!1.31e-07!9;CL:0002632!1.31e-07!9;CL:0002166!1.80e-07!3;CL:0002621!2.33e-07!3;CL:0002623!2.33e-07!3;CL:0000362!6.75e-07!8;CL:0002328!8.03e-07!3 | |ontology_enrichment_celltype=CL:0002076!2.28e-24!43;CL:0000223!2.55e-17!59;CL:0002159!1.59e-15!13;CL:0002251!5.44e-15!21;CL:0002368!3.47e-14!13;CL:0000622!1.75e-11!5;CL:0000066!1.98e-11!254;CL:0000154!1.76e-09!6;CL:0000244!4.25e-09!4;CL:0000731!4.25e-09!4;CL:0000076!7.34e-09!62;CL:0002077!3.45e-08!33;CL:0002202!1.31e-07!9;CL:0002632!1.31e-07!9;CL:0002166!1.80e-07!3;CL:0002621!2.33e-07!3;CL:0002623!2.33e-07!3;CL:0000362!6.75e-07!8;CL:0002328!8.03e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.07e-26;42!CL:0002251;1.60e-21;20!CL:0002368;7.91e-19;13!CL:0002159;1.11e-15;14!CL:0000622;8.75e-15;5!CL:0000154;2.94e-12;6!CL:0000244;1.37e-11;4!CL:0000731;1.37e-11;4!CL:0002202;5.33e-10;9!CL:0002632;5.33e-10;9!CL:0002166;1.78e-09;3!CL:0002621;2.82e-09;3!CL:0002623;2.82e-09;3!CL:0002328;1.46e-08;3!CL:0000307;1.97e-08;3!CL:0000150;4.88e-08;9!CL:0000317;3.39e-07;2!CL:1000448;3.39e-07;2!CL:0002308;3.39e-07;2!CL:0002140;3.39e-07;2!CL:0002077;4.23e-07;34!CL:0000575;9.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,9.58e-35,42;CL:0000223,1.96e-25,58;CL:0002251,1.65e-21,20;CL:0002368,8.17e-19,13;CL:0002159,1.15e-15,14;CL:0000066,7.56e-15,253;CL:0000622,7.91e-15,5;CL:0000154,2.71e-12,6;CL:0000244,1.22e-11,4;CL:0000731,1.22e-11,4;CL:0002202,5.81e-10,9;CL:0002632,5.81e-10,9;CL:0002166,1.81e-09,3;CL:0002621,2.55e-09,3;CL:0002623,2.55e-09,3;CL:0000076,2.70e-09,63;CL:0002328,1.33e-08,3;CL:0000068,2.47e-08,3;CL:0000069,2.47e-08,3;CL:0000307,2.47e-08,3;CL:0000377,2.47e-08,3;CL:0002077,4.00e-08,34;CL:0000150,4.63e-08,9;CL:0000317,3.39e-07,2;CL:1000448,3.39e-07,2;CL:0002308,3.39e-07,2;CL:0002140,3.39e-07,2;CL:0000575,9.50e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;4.59e-13;58!CL:0000377;1.97e-08;3!UBERON:0008814;4.84e-07;2!UBERON:0010056;4.84e-07;2 | |||
|ontology_enrichment_disease=DOID:1749!3.05e-20!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.17e-19;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.19e-19,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.01e-21!72;UBERON:0000166!6.40e-18!21;UBERON:0000161!2.59e-17!35;UBERON:0004119!2.36e-15!169;UBERON:0000925!2.36e-15!169;UBERON:0006595!2.36e-15!169;UBERON:0000165!2.01e-14!28;UBERON:0000930!2.01e-14!28;UBERON:0000065!2.76e-13!53;UBERON:0000974!8.13e-13!10;UBERON:0003102!3.43e-12!95;UBERON:0003729!3.61e-11!5;UBERON:0000365!8.55e-11!5;UBERON:0001007!8.94e-10!155;UBERON:0001555!8.94e-10!155;UBERON:0007026!8.94e-10!155;UBERON:0003343!2.11e-09!4;UBERON:0004785!2.11e-09!4;UBERON:0006562!3.78e-09!11;UBERON:0001444!4.31e-09!48;UBERON:0005910!6.47e-09!6;UBERON:0005178!1.19e-08!34;UBERON:0002224!1.19e-08!34;UBERON:0007196!1.95e-08!14;UBERON:0001558!1.95e-08!14;UBERON:0005181!2.60e-08!35;UBERON:0000344!3.06e-08!12;UBERON:0001723!8.54e-08!3;UBERON:0001033!8.54e-08!3;UBERON:0010056!8.54e-08!3;UBERON:0004921!1.13e-07!129;UBERON:0004185!1.13e-07!129;UBERON:0000077!1.40e-07!130;UBERON:0001042!1.43e-07!10;UBERON:0009145!1.43e-07!10;UBERON:0003126!1.44e-07!7;UBERON:0001005!1.44e-07!7;UBERON:0001949!2.33e-07!3;UBERON:0003408!5.30e-07!10;UBERON:0001041!7.70e-07!98;UBERON:0004815!8.03e-07!3;UBERON:0002031!8.03e-07!3;UBERON:0000072!8.60e-07!46;UBERON:0000078!9.53e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;6.70e-20;28!UBERON:0000161;2.41e-19;19!UBERON:0000166;2.41e-19;19!UBERON:0000974;3.80e-17;6!UBERON:0000365;7.09e-14;5!UBERON:0000486;8.07e-14;12!UBERON:0003729;5.23e-13;13!UBERON:0000344;1.52e-12;20!UBERON:0003343;4.33e-12;4!UBERON:0004785;4.33e-12;4!UBERON:0005910;1.65e-11;6!UBERON:0007196;1.77e-10;15!UBERON:0001558;1.77e-10;15!UBERON:0001723;6.50e-10;3!UBERON:0001033;6.50e-10;3!UBERON:0003126;6.68e-10;7!UBERON:0001005;6.68e-10;7!UBERON:0000153;7.84e-10;54!UBERON:0007811;1.90e-09;52!UBERON:0001949;2.82e-09;3!UBERON:0004815;1.46e-08;3!UBERON:0002031;1.46e-08;3!UBERON:0001004;2.16e-08;65!UBERON:0000033;5.97e-08;50!UBERON:0001444;6.51e-08;48!UBERON:0001555;1.12e-07;54!UBERON:0001044;1.25e-07;6!UBERON:0003293;1.25e-07;6!UBERON:0003294;1.25e-07;6!UBERON:0010047;1.25e-07;6!UBERON:0003408;1.25e-07;6!UBERON:0000167;1.25e-07;6!UBERON:0003127;2.83e-07;2!UBERON:0002419;3.39e-07;2!UBERON:0007771;3.39e-07;2!UBERON:0003297;3.39e-07;2!UBERON:0001821;3.39e-07;2!UBERON:0003487;3.39e-07;2!UBERON:0001820;3.39e-07;2!UBERON:0001708;3.40e-07;4!UBERON:0008895;3.40e-07;4!UBERON:0006562;3.59e-07;2!UBERON:0005178;4.08e-07;34!UBERON:0002224;4.08e-07;34!UBERON:0005181;6.33e-07;35!UBERON:0001041;7.10e-07;14!UBERON:0000341;9.63e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.98e-24,74;UBERON:0000166,5.83e-23,22;UBERON:0000153,2.31e-20,62;UBERON:0007811,2.31e-20,62;UBERON:0000165,4.56e-19,29;UBERON:0000930,4.56e-19,29;UBERON:0000161,8.51e-19,36;UBERON:0004119,1.39e-17,160;UBERON:0000925,1.39e-17,160;UBERON:0006595,1.39e-17,160;UBERON:0003102,5.98e-17,99;UBERON:0000974,7.08e-17,10;UBERON:0000033,1.32e-15,56;UBERON:0000365,6.62e-14,5;UBERON:0000065,8.81e-14,54;UBERON:0003729,5.51e-13,13;UBERON:0001444,6.65e-13,49;UBERON:0000344,1.61e-12,20;UBERON:0006562,3.98e-12,11;UBERON:0003343,4.79e-12,4;UBERON:0004785,4.79e-12,4;UBERON:0005910,1.56e-11,6;UBERON:0001007,2.51e-11,145;UBERON:0001555,2.51e-11,145;UBERON:0007026,2.51e-11,145;UBERON:0007196,1.89e-10,15;UBERON:0001558,1.89e-10,15;UBERON:0001042,5.36e-10,10;UBERON:0009145,5.36e-10,10;UBERON:0001723,6.69e-10,3;UBERON:0001033,6.69e-10,3;UBERON:0010056,6.69e-10,3;UBERON:0003126,7.88e-10,7;UBERON:0001005,7.88e-10,7;UBERON:0001949,2.55e-09,3;UBERON:0003408,3.22e-09,10;UBERON:0008814,5.68e-09,18;UBERON:0001041,6.90e-09,87;UBERON:0004815,1.33e-08,3;UBERON:0002031,1.33e-08,3;UBERON:0000072,1.88e-08,47;UBERON:0004921,3.35e-08,118;UBERON:0001044,1.23e-07,6;UBERON:0003293,1.23e-07,6;UBERON:0003294,1.23e-07,6;UBERON:0010047,1.23e-07,6;UBERON:0000167,1.23e-07,6;UBERON:0005178,1.28e-07,34;UBERON:0002224,1.28e-07,34;UBERON:0005181,2.45e-07,35;UBERON:0003127,2.83e-07,2;UBERON:0002419,3.39e-07,2;UBERON:0007771,3.39e-07,2;UBERON:0003297,3.39e-07,2;UBERON:0001821,3.39e-07,2;UBERON:0003487,3.39e-07,2;UBERON:0001820,3.39e-07,2;UBERON:0005089,3.39e-07,2;UBERON:0005088,3.39e-07,2;UBERON:0001708,3.44e-07,4;UBERON:0008895,3.44e-07,4;UBERON:0000341,9.50e-07,2 | |||
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| ||
|short_description=p1@SERPINB13 | |short_description=p1@SERPINB13 | ||
}} | }} |
Latest revision as of 04:10, 20 September 2015
Short description: | p1@SERPINB13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SERPINB13_5end |
Coexpression cluster: | C820_cervical_tongue_esophagus_throat_tonsil_oral_uterus |
Association with transcript: | 0bp_to_ENST00000479842_5end |
EntrezGene: | SERPINB13 |
HGNC: | 8944 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 9.58e-35 | 42 |
endodermal cell | 1.96e-25 | 58 |
epithelial cell of alimentary canal | 1.65e-21 | 20 |
respiratory epithelial cell | 8.17e-19 | 13 |
general ecto-epithelial cell | 1.15e-15 | 14 |
epithelial cell | 7.56e-15 | 253 |
acinar cell | 7.91e-15 | 5 |
protein secreting cell | 2.71e-12 | 6 |
transitional epithelial cell | 1.22e-11 | 4 |
urothelial cell | 1.22e-11 | 4 |
epithelial cell of tracheobronchial tree | 5.81e-10 | 9 |
epithelial cell of lower respiratory tract | 5.81e-10 | 9 |
epithelial cell of Malassez | 1.81e-09 | 3 |
gingival epithelial cell | 2.55e-09 | 3 |
acinar cell of salivary gland | 2.55e-09 | 3 |
squamous epithelial cell | 2.70e-09 | 63 |
bronchial epithelial cell | 1.33e-08 | 3 |
duct epithelial cell | 2.47e-08 | 3 |
branched duct epithelial cell | 2.47e-08 | 3 |
tracheal epithelial cell | 2.47e-08 | 3 |
tracheoblast | 2.47e-08 | 3 |
ecto-epithelial cell | 4.00e-08 | 34 |
glandular epithelial cell | 4.63e-08 | 9 |
sebum secreting cell | 3.39e-07 | 2 |
epithelial cell of sweat gland | 3.39e-07 | 2 |
epithelial cell of skin gland | 3.39e-07 | 2 |
acinar cell of sebaceous gland | 3.39e-07 | 2 |
corneal epithelial cell | 9.50e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.19e-19 | 14 |