FFCP PHASE1:Hg19::chr11:116700600..116700613,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:116700600..116700613,+
|short_description=p2@APOC3
|description=CAGE_peak_2_at_APOC3_5end
|association_with_transcript=0bp_to_ENST00000227667_5end
|Entre...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=345 | |EntrezGene=345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=610 | |HGNC=610 | ||
|TSSclassifier=strong | |||
|UniProt=P02656 | |UniProt=P02656 | ||
|association_with_transcript=0bp_to_ENST00000227667_5end | |||
|cluster_id=chr11:116700600..116700613,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_APOC3_5end | |||
|id=chr11:116700600..116700613,+ | |||
|ontology_enrichment_celltype=CL:0000181!6.13e-18!12;CL:0000417!6.13e-18!12;CL:0000668!6.13e-18!12;CL:0000414!6.13e-18!12;CL:0000412!6.13e-18!12;CL:0000182!6.13e-18!12;CL:0002602!1.60e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.91e-27;12!CL:0002563;9.64e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.02e-27,12;CL:0000223,4.45e-10,58;CL:0002563,9.64e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.71e-22;11!UBERON:0009497;1.86e-18;13!UBERON:0003104;5.78e-13;31!UBERON:0001041;1.08e-07;30!UBERON:0005425;1.10e-07;1!CL:0000223;6.46e-07;58 | |||
|ontology_enrichment_disease=DOID:114!2.15e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.49e-20!19;UBERON:0006925!1.49e-20!19;UBERON:0008836!1.49e-20!19;UBERON:0009497!8.60e-18!25;UBERON:0000015!8.60e-18!25;UBERON:0002423!8.60e-18!25;UBERON:0006235!8.60e-18!25;UBERON:0004161!8.60e-18!25;UBERON:0008835!2.10e-17!22;UBERON:0003894!2.10e-17!22;UBERON:0005057!4.21e-17!26;UBERON:0009854!1.55e-16!23;UBERON:0003929!2.80e-16!54;UBERON:0002368!4.38e-16!35;UBERON:0007499!5.16e-15!25;UBERON:0009856!2.43e-14!26;UBERON:0005172!2.61e-12!55;UBERON:0005173!2.61e-12!55;UBERON:0002417!3.59e-12!61;UBERON:0000916!3.59e-12!61;UBERON:0000949!9.05e-12!45;UBERON:0002365!1.25e-11!31;UBERON:0002330!1.25e-11!31;UBERON:0001007!3.90e-11!155;UBERON:0001555!3.90e-11!155;UBERON:0007026!3.90e-11!155;UBERON:0005911!2.20e-10!82;UBERON:0004119!1.20e-09!169;UBERON:0000925!1.20e-09!169;UBERON:0006595!1.20e-09!169;UBERON:0002530!1.23e-09!59;UBERON:0004921!1.97e-09!129;UBERON:0004185!1.97e-09!129;UBERON:0005177!7.74e-08!107;UBERON:0005409!8.10e-08!35;UBERON:0009568!1.60e-07!2;UBERON:0002216!1.60e-07!2;UBERON:0002209!1.60e-07!2;UBERON:0002213!1.60e-07!2;UBERON:0004267!1.60e-07!2;UBERON:0006444!1.60e-07!2;UBERON:0001995!1.60e-07!2;UBERON:0004715!1.60e-07!2;UBERON:0001468!1.60e-07!2;UBERON:0001130!1.60e-07!2;UBERON:0001066!1.60e-07!2;UBERON:0009569!4.01e-07!113;UBERON:0000160!7.88e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.07e-28;19!UBERON:0006925;5.07e-28;19!UBERON:0002423;5.91e-21;25!UBERON:0000160;1.53e-17;17!UBERON:0005409;1.74e-17;22!UBERON:0002365;3.83e-16;31!UBERON:0002330;3.83e-16;31!UBERON:0002368;3.67e-14;33!UBERON:0002108;8.16e-13;4!UBERON:0001007;1.72e-11;81!UBERON:0004921;8.18e-11;33!UBERON:0000949;3.63e-10;43!UBERON:0005172;8.65e-09;52!UBERON:0005173;8.65e-09;52!UBERON:0002417;5.84e-08;58!UBERON:0000916;5.84e-08;58!UBERON:0001242;9.64e-08;4!UBERON:0001262;9.64e-08;4!UBERON:0004786;9.64e-08;4!UBERON:0004808;9.64e-08;4!UBERON:0001277;9.64e-08;4!UBERON:0000941;1.10e-07;1!UBERON:0001785;1.10e-07;1!UBERON:0002464;1.10e-07;1!UBERON:0004904;1.10e-07;1!UBERON:0001021;1.10e-07;1!UBERON:0001155;3.39e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.23e-28,19;UBERON:0006925,5.23e-28,19;UBERON:0008836,5.23e-28,19;UBERON:0008835,5.38e-24,22;UBERON:0003894,5.38e-24,22;UBERON:0009854,6.86e-23,23;UBERON:0007499,6.06e-21,25;UBERON:0009497,6.06e-21,25;UBERON:0000015,6.06e-21,25;UBERON:0002423,6.06e-21,25;UBERON:0006235,6.06e-21,25;UBERON:0004161,6.06e-21,25;UBERON:0009856,4.40e-20,26;UBERON:0005409,2.68e-19,25;UBERON:0000160,1.49e-17,17;UBERON:0004921,9.37e-17,118;UBERON:0002365,1.30e-16,31;UBERON:0002330,1.30e-16,31;UBERON:0003929,4.62e-16,54;UBERON:0002368,1.51e-14,35;UBERON:0005172,3.18e-13,54;UBERON:0005173,3.18e-13,54;UBERON:0001007,5.91e-13,145;UBERON:0001555,5.91e-13,145;UBERON:0007026,5.91e-13,145;UBERON:0002108,8.00e-13,4;UBERON:0002417,1.06e-11,60;UBERON:0000916,1.06e-11,60;UBERON:0004119,2.15e-11,160;UBERON:0000925,2.15e-11,160;UBERON:0006595,2.15e-11,160;UBERON:0011216,2.88e-11,223;UBERON:0000949,5.45e-11,45;UBERON:0002530,5.84e-10,59;UBERON:0005911,8.30e-10,82;UBERON:0001242,9.64e-08,4;UBERON:0001262,9.64e-08,4;UBERON:0004786,9.64e-08,4;UBERON:0004808,9.64e-08,4;UBERON:0001277,9.64e-08,4;UBERON:0000941,1.06e-07,1;UBERON:0001785,1.06e-07,1;UBERON:0002464,1.06e-07,1;UBERON:0004904,1.06e-07,1;UBERON:0001021,1.06e-07,1;UBERON:0003902,1.06e-07,1;UBERON:0005425,1.06e-07,1;UBERON:0001041,1.79e-07,87;UBERON:0001155,3.35e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5540919722054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813357600086629,0.932949495138334,0.504641701751257,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1030.51843310148,652.597271873944,498.626681239105,0,118.683843194105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,2.00068208423871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,101.401078207371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,229.987537997716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,225.003683856502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,43.5843653787898,0,0,0,0,0,0,0,0,0,24.2333186523805,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0.0897576444097721,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,42.6886275730501,0,0,51.7476752344534,13.4426631885398,0,0,0,0,0,0,0,0,0,0,31.4575861726526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,0,0,4.63306494227304,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0.399358000997982,0.429226048136571,0,0,0,15.144473438569,60.1115681004116,51.015416337942,56.0797484866818,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.630445658393585,1.10154635083496,0,0,0,0,0,0,0,0,0,0,0,0,0,418.699731618282,828.168055701383,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.73014247416666,0,0,0,0.485710993059139,0,0,0,0,0,0,108.198169667338,106.219946404923,0,0,0,0,0,0,0,0,1.28915775947154,0,0,0,0,1.46067277649303,0,0,0,0,0,15.3417783749466,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0.33639558774184,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5540919722054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813357600086629,0.932949495138334,0.504641701751257,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1030.51843310148,652.597271873944,498.626681239105,0,118.683843194105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,2.00068208423871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,101.401078207371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,229.987537997716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,225.003683856502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,43.5843653787898,0,0,0,0,0,0,0,0,0,24.2333186523805,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0.0897576444097721,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,42.6886275730501,0,0,51.7476752344534,13.4426631885398,0,0,0,0,0,0,0,0,0,0,31.4575861726526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,0,0,4.63306494227304,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0.399358000997982,0.429226048136571,0,0,0,15.144473438569,60.1115681004116,51.015416337942,56.0797484866818,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.630445658393585,1.10154635083496,0,0,0,0,0,0,0,0,0,0,0,0,0,418.699731618282,828.168055701383,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.73014247416666,0,0,0,0.485710993059139,0,0,0,0,0,0,108.198169667338,106.219946404923,0,0,0,0,0,0,0,0,1.28915775947154,0,0,0,0,1.46067277649303,0,0,0,0,0,15.3417783749466,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0.33639558774184,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@APOC3 | |||
}} | }} |
Latest revision as of 19:26, 15 September 2015
Short description: | p2@APOC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_APOC3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000227667_5end |
EntrezGene: | APOC3 |
HGNC: | 610 |
UniProt: | P02656 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.02e-27 | 12 |
endodermal cell | 4.45e-10 | 58 |
intestinal epithelial cell | 9.64e-08 | 4 |