FFCP PHASE1:Hg19::chr19:1826957..1826984,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:1826957..1826984,- | |||
|description=CAGE_peak_at_chr19:1826957..1826984,- | |description=CAGE_peak_at_chr19:1826957..1826984,- | ||
|id=chr19:1826957..1826984,- | |id=chr19:1826957..1826984,- | ||
|ontology_enrichment_celltype=CL:1000497!1.53e-10!18;CL:0002518!1.53e-10!18;CL:1000449!2.62e-10!16;CL:1000507!3.86e-08!12;CL:1000494!3.86e-08!12;CL:0002681!3.15e-07!13;CL:0002584!3.15e-07!13 | |ontology_enrichment_celltype=CL:1000497!1.53e-10!18;CL:0002518!1.53e-10!18;CL:1000449!2.62e-10!16;CL:1000507!3.86e-08!12;CL:1000494!3.86e-08!12;CL:0002681!3.15e-07!13;CL:0002584!3.15e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000497;7.25e-32;17!CL:0002518;7.25e-32;17!CL:1000449;3.27e-29;15!CL:0002681;3.46e-22;12!CL:0002584;3.46e-22;12!CL:1000507;2.29e-20;10!CL:1000494;2.29e-20;10!CL:1000746;3.17e-20;7!CL:1000612;3.17e-20;7!CL:0000650;4.83e-13;2!CL:1000500;4.83e-13;2!CL:1000618;4.83e-13;2!CL:1001318;4.83e-13;2!CL:0002173;4.83e-13;2!CL:0002188;1.72e-10;5!CL:0000632;1.29e-08;3!CL:0000239;2.74e-08;3!CL:1000615;2.74e-08;3!CL:0002306;2.74e-08;3!CL:0000669;6.23e-07;4!CL:0000511;7.95e-07;1!CL:0002625;7.95e-07;1!CL:0000216;7.95e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,9.97e-32,17;CL:0002518,9.97e-32,17;CL:1000449,4.37e-29,15;CL:0002681,5.12e-22,12;CL:0002584,5.12e-22,12;CL:1000507,3.02e-20,10;CL:1000494,3.02e-20,10;CL:1000746,3.58e-20,7;CL:1000612,3.58e-20,7;CL:0000650,5.61e-13,2;CL:1000500,5.61e-13,2;CL:1000618,5.61e-13,2;CL:1001318,5.61e-13,2;CL:0002173,5.61e-13,2;CL:0002188,1.75e-10,5;CL:0000632,1.29e-08,3;CL:0000239,3.84e-08,3;CL:1000615,3.84e-08,3;CL:0002306,3.84e-08,3;CL:0000511,6.12e-07,1;CL:0002625,6.12e-07,1;CL:0000216,6.12e-07,1;CL:0000669,6.70e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.55e-10;10!UBERON:0005564;7.55e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;1.15e-11;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.22e-11,8 | |||
|ontology_enrichment_uberon=UBERON:0005172!1.88e-15!55;UBERON:0005173!1.88e-15!55;UBERON:0003887!1.81e-13!21;UBERON:0002113!2.39e-13!27;UBERON:0003918!2.39e-13!27;UBERON:0005095!2.39e-13!27;UBERON:0007687!2.39e-13!27;UBERON:0003886!5.19e-13!63;UBERON:0002417!7.67e-13!61;UBERON:0000916!7.67e-13!61;UBERON:0004876!2.51e-12!20;UBERON:0000080!3.41e-12!18;UBERON:0002120!3.41e-12!18;UBERON:0004875!3.41e-12!18;UBERON:0005721!3.41e-12!18;UBERON:0005754!3.41e-12!18;UBERON:0007297!3.41e-12!18;UBERON:0006554!9.16e-12!44;UBERON:0003064!1.13e-11!37;UBERON:0001008!2.57e-11!45;UBERON:0006555!2.79e-11!17;UBERON:0005103!2.79e-11!17;UBERON:0000083!2.79e-11!17;UBERON:0009201!2.79e-11!17;UBERON:0004819!2.79e-11!17;UBERON:0006553!2.79e-11!17;UBERON:0003074!2.79e-11!17;UBERON:0003060!2.79e-11!17;UBERON:0000489!3.37e-11!32;UBERON:0002553!1.25e-10!70;UBERON:0004211!2.62e-10!16;UBERON:0001285!2.62e-10!16;UBERON:0007684!2.62e-10!16;UBERON:0003220!2.62e-10!16;UBERON:0004208!2.62e-10!16;UBERON:0000466!1.45e-09!126;UBERON:0005177!7.60e-09!107;UBERON:0000058!2.59e-08!26;UBERON:0009773!3.86e-08!12;UBERON:0001231!3.86e-08!12;UBERON:0004810!3.86e-08!12;UBERON:0000991!4.81e-08!21;UBERON:0009196!4.81e-08!21;UBERON:0009117!4.81e-08!21;UBERON:0005564!4.81e-08!21;UBERON:0009569!6.53e-08!113;UBERON:0000473!7.60e-08!8;UBERON:0000464!7.72e-08!104;UBERON:0004176!1.70e-07!22;UBERON:0003101!1.74e-07!22;UBERON:0000079!1.74e-07!22;UBERON:0001225!3.15e-07!13;UBERON:0008987!3.15e-07!13;UBERON:0005156!3.71e-07!59;UBERON:0000990!3.71e-07!59;UBERON:0001851!7.34e-07!16;UBERON:0003135!7.38e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;6.63e-32;24!UBERON:0011143;6.63e-32;24!UBERON:0006555;3.27e-29;15!UBERON:0004819;3.27e-29;15!UBERON:0001285;3.27e-29;15!UBERON:0007684;3.27e-29;15!UBERON:0000489;5.31e-26;29!UBERON:0005172;3.17e-25;52!UBERON:0005173;3.17e-25;52!UBERON:0006554;4.67e-25;30!UBERON:0001008;4.67e-25;30!UBERON:0001851;5.05e-23;15!UBERON:0000353;8.37e-23;15!UBERON:0001225;3.46e-22;12!UBERON:0008987;3.46e-22;12!UBERON:0004211;2.29e-20;10!UBERON:0009773;2.29e-20;10!UBERON:0001231;2.29e-20;10!UBERON:0004810;2.29e-20;10!UBERON:0000074;3.17e-20;7!UBERON:0001229;3.17e-20;7!UBERON:0002417;8.23e-17;58!UBERON:0000916;8.23e-17;58!UBERON:0003567;4.83e-13;2!UBERON:0003838;4.83e-13;2!UBERON:0003586;4.83e-13;2!UBERON:0005169;4.83e-13;2!UBERON:0002321;4.83e-13;2!UBERON:0005215;4.83e-13;2!UBERON:0002303;4.83e-13;2!UBERON:0002319;4.83e-13;2!UBERON:0000473;5.08e-12;8!UBERON:0005177;4.33e-10;99!UBERON:0002106;7.48e-09;3!UBERON:0003135;9.09e-09;11!UBERON:0006853;2.74e-08;3!UBERON:0007685;2.74e-08;3!UBERON:0004134;2.74e-08;3!UBERON:0003891;6.23e-07;4!UBERON:0003103;6.77e-07;61!UBERON:0000991;7.53e-07;21!UBERON:0001136;7.95e-07;1!UBERON:0001343;7.95e-07;1!UBERON:0004910;7.95e-07;1!UBERON:0004813;7.95e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,2.61e-34,54;UBERON:0005173,2.61e-34,54;UBERON:0002417,1.79e-30,60;UBERON:0000916,1.79e-30,60;UBERON:0002113,3.30e-29,26;UBERON:0003918,3.30e-29,26;UBERON:0011143,3.30e-29,26;UBERON:0005095,3.30e-29,26;UBERON:0007687,3.30e-29,26;UBERON:0004211,4.37e-29,15;UBERON:0009773,4.37e-29,15;UBERON:0001231,4.37e-29,15;UBERON:0001285,4.37e-29,15;UBERON:0007684,4.37e-29,15;UBERON:0004208,4.37e-29,15;UBERON:0006555,3.53e-27,16;UBERON:0004819,3.53e-27,16;UBERON:0000489,4.03e-24,31;UBERON:0001851,7.12e-23,15;UBERON:0000353,1.11e-22,15;UBERON:0003887,1.21e-22,12;UBERON:0001225,5.12e-22,12;UBERON:0008987,5.12e-22,12;UBERON:0004810,3.02e-20,10;UBERON:0010532,3.58e-20,7;UBERON:0000074,3.58e-20,7;UBERON:0001229,3.58e-20,7;UBERON:0001230,3.58e-20,7;UBERON:0003220,3.58e-20,7;UBERON:0005749,3.58e-20,7;UBERON:0004199,3.58e-20,7;UBERON:0004209,3.58e-20,7;UBERON:0004198,3.58e-20,7;UBERON:0004876,4.55e-18,11;UBERON:0005103,1.24e-17,8;UBERON:0000083,1.24e-17,8;UBERON:0009201,1.24e-17,8;UBERON:0006553,1.24e-17,8;UBERON:0003074,1.24e-17,8;UBERON:0003060,1.24e-17,8;UBERON:0005177,1.88e-16,101;UBERON:0000080,1.18e-15,9;UBERON:0002120,1.18e-15,9;UBERON:0004875,1.18e-15,9;UBERON:0005721,1.18e-15,9;UBERON:0005754,1.18e-15,9;UBERON:0007297,1.18e-15,9;UBERON:0006554,4.09e-15,47;UBERON:0001008,9.45e-15,48;UBERON:0009569,1.93e-14,112;UBERON:0000058,9.62e-14,19;UBERON:0003886,3.90e-13,54;UBERON:0003567,5.61e-13,2;UBERON:0003838,5.61e-13,2;UBERON:0003586,5.61e-13,2;UBERON:0005169,5.61e-13,2;UBERON:0002321,5.61e-13,2;UBERON:0005215,5.61e-13,2;UBERON:0002303,5.61e-13,2;UBERON:0002319,5.61e-13,2;UBERON:0000473,4.66e-12,8;UBERON:0002553,2.33e-11,61;UBERON:0003103,9.79e-10,68;UBERON:0003064,3.89e-09,28;UBERON:0002106,7.20e-09,3;UBERON:0004854,7.20e-09,3;UBERON:0009034,7.20e-09,3;UBERON:0002095,7.20e-09,3;UBERON:0004782,7.20e-09,3;UBERON:0003281,7.20e-09,3;UBERON:0009664,7.20e-09,3;UBERON:0002296,7.20e-09,3;UBERON:0005602,7.20e-09,3;UBERON:0001179,7.20e-09,3;UBERON:0006293,7.20e-09,3;UBERON:0003135,8.55e-09,11;UBERON:0006853,3.84e-08,3;UBERON:0007685,3.84e-08,3;UBERON:0004134,3.84e-08,3;UBERON:0003104,8.97e-08,160;UBERON:0009142,8.97e-08,160;UBERON:0002100,2.67e-07,199;UBERON:0001136,6.12e-07,1;UBERON:0001343,6.12e-07,1;UBERON:0004910,6.12e-07,1;UBERON:0005154,6.12e-07,1;UBERON:0005295,6.12e-07,1;UBERON:0004813,6.12e-07,1;UBERON:0005297,6.12e-07,1;UBERON:0005294,6.12e-07,1;UBERON:0010141,6.12e-07,1;UBERON:0005891,6.12e-07,1;UBERON:0003891,6.70e-07,4;UBERON:0000991,7.25e-07,21;UBERON:0009196,7.25e-07,21;UBERON:0009117,7.25e-07,21;UBERON:0005564,7.25e-07,21 | |||
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| ||
|short_description=p@chr19:1826957..1826984,- | |short_description=p@chr19:1826957..1826984,- | ||
}} | }} |
Latest revision as of 05:01, 26 July 2015
Short description: | p@chr19:1826957..1826984, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1826957..1826984, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 9.97e-32 | 17 |
kidney epithelial cell | 9.97e-32 | 17 |
epithelial cell of nephron | 4.37e-29 | 15 |
kidney cortical cell | 5.12e-22 | 12 |
renal cortical epithelial cell | 5.12e-22 | 12 |
kidney tubule cell | 3.02e-20 | 10 |
nephron tubule epithelial cell | 3.02e-20 | 10 |
glomerular cell | 3.58e-20 | 7 |
kidney corpuscule cell | 3.58e-20 | 7 |
mesangial cell | 5.61e-13 | 2 |
kidney interstitial cell | 5.61e-13 | 2 |
juxtaglomerular complex cell | 5.61e-13 | 2 |
renal interstitial pericyte | 5.61e-13 | 2 |
extraglomerular mesangial cell | 5.61e-13 | 2 |
glomerular endothelial cell | 1.75e-10 | 5 |
hepatic stellate cell | 1.29e-08 | 3 |
brush border epithelial cell | 3.84e-08 | 3 |
kidney cortex tubule cell | 3.84e-08 | 3 |
epithelial cell of proximal tubule | 3.84e-08 | 3 |
androgen binding protein secreting cell | 6.12e-07 | 1 |
seminiferous tubule epithelial cell | 6.12e-07 | 1 |
Sertoli cell | 6.12e-07 | 1 |
pericyte cell | 6.70e-07 | 4 |
Ontology term | p-value | n |
---|