FFCP PHASE1:Hg19::chr13:78003842..78003852,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:78003842..78003852,- | |||
|coexpression_cluster_id=C826 | |||
|description=CAGE_peak_at_chr13:78003842..78003852,- | |description=CAGE_peak_at_chr13:78003842..78003852,- | ||
|id=chr13:78003842..78003852,- | |id=chr13:78003842..78003852,- | ||
|ontology_enrichment_celltype=CL:0000945!2.71e-29!24;CL:0000826!2.71e-29!24;CL:0000838!1.94e-19!52;CL:0000542!4.87e-19!53;CL:0000051!4.87e-19!53;CL:0000080!1.52e-14!6;CL:0002087!1.73e-12!119;CL:0002031!6.77e-12!124;CL:0000988!1.31e-11!182;CL:0000946!1.73e-10!1;CL:0000786!1.73e-10!1;CL:0000980!1.73e-10!1;CL:0000738!2.80e-10!140;CL:0002032!2.24e-08!165;CL:0000837!2.24e-08!165;CL:0000062!4.96e-08!11;CL:0000375!4.96e-08!11;CL:0000335!4.96e-08!11;CL:0000037!6.09e-08!172;CL:0000566!6.09e-08!172 | |ontology_enrichment_celltype=CL:0000945!2.71e-29!24;CL:0000826!2.71e-29!24;CL:0000838!1.94e-19!52;CL:0000542!4.87e-19!53;CL:0000051!4.87e-19!53;CL:0000080!1.52e-14!6;CL:0002087!1.73e-12!119;CL:0002031!6.77e-12!124;CL:0000988!1.31e-11!182;CL:0000946!1.73e-10!1;CL:0000786!1.73e-10!1;CL:0000980!1.73e-10!1;CL:0000738!2.80e-10!140;CL:0002032!2.24e-08!165;CL:0000837!2.24e-08!165;CL:0000062!4.96e-08!11;CL:0000375!4.96e-08!11;CL:0000335!4.96e-08!11;CL:0000037!6.09e-08!172;CL:0000566!6.09e-08!172 | ||
|ontology_enrichment_celltype_v019=CL:0000945;4.93e-15;24!CL:0000062;9.69e-11;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.26e-15,24;CL:0000826,4.26e-15,24;CL:0000838,8.07e-11,52;CL:0000542,1.28e-10,53;CL:0000051,1.28e-10,53;CL:0000062,6.35e-09,11;CL:0000375,6.35e-09,11;CL:0000335,6.35e-09,11 | |||
|ontology_enrichment_development_v019=CL:0000335;5.86e-09;11 | |||
|ontology_enrichment_disease=DOID:0060058!2.17e-14!10;DOID:0060060!1.89e-10!1;DOID:0060061!1.89e-10!1;DOID:8691!1.89e-10!1;DOID:630!2.28e-10!1;DOID:0050177!2.28e-10!1;DOID:0050427!2.28e-10!1;DOID:2355!4.33e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002331!6.16e-09!10;UBERON:0000358!6.16e-09!10;UBERON:0000307!6.16e-09!10;UBERON:0000091!6.16e-09!10;UBERON:0000087!6.16e-09!10;UBERON:0007806!6.16e-09!10;UBERON:0008780!6.16e-09!10;UBERON:0005728!6.16e-09!10 | |ontology_enrichment_uberon=UBERON:0002331!6.16e-09!10;UBERON:0000358!6.16e-09!10;UBERON:0000307!6.16e-09!10;UBERON:0000091!6.16e-09!10;UBERON:0000087!6.16e-09!10;UBERON:0007806!6.16e-09!10;UBERON:0008780!6.16e-09!10;UBERON:0005728!6.16e-09!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;7.74e-10;10!UBERON:0000178;7.41e-07;15!UBERON:0000179;7.41e-07;15!UBERON:0000463;7.41e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,8.46e-10,10;UBERON:0000358,8.46e-10,10;UBERON:0000307,8.46e-10,10;UBERON:0000091,8.46e-10,10;UBERON:0000087,8.46e-10,10;UBERON:0007010,8.46e-10,10;UBERON:0007806,8.46e-10,10;UBERON:0008780,8.46e-10,10;UBERON:0005728,8.46e-10,10;UBERON:0000178,7.86e-07,15;UBERON:0000179,7.86e-07,15;UBERON:0000463,7.86e-07,15 | |||
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|short_description=p@chr13:78003842..78003852,- | |short_description=p@chr13:78003842..78003852,- | ||
}} | }} |
Latest revision as of 17:13, 24 July 2015
Short description: | p@chr13:78003842..78003852, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:78003842..78003852, - |
Coexpression cluster: | C826_hairy_B_mycosis_cord_xeroderma_neuroblastoma_plasma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.26e-15 | 24 |
pro-B cell | 4.26e-15 | 24 |
lymphoid lineage restricted progenitor cell | 8.07e-11 | 52 |
lymphocyte | 1.28e-10 | 53 |
common lymphoid progenitor | 1.28e-10 | 53 |
osteoblast | 6.35e-09 | 11 |
osteoprogenitor cell | 6.35e-09 | 11 |
mesenchyme condensation cell | 6.35e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 8.46e-10 | 10 |
blastocyst | 8.46e-10 | 10 |
blastula | 8.46e-10 | 10 |
bilaminar disc | 8.46e-10 | 10 |
inner cell mass | 8.46e-10 | 10 |
cleaving embryo | 8.46e-10 | 10 |
connecting stalk | 8.46e-10 | 10 |
inner cell mass derived epiblast | 8.46e-10 | 10 |
extraembryonic mesoderm | 8.46e-10 | 10 |
blood | 7.86e-07 | 15 |
haemolymphatic fluid | 7.86e-07 | 15 |
organism substance | 7.86e-07 | 15 |