FFCP PHASE1:Hg19::chr11:12398061..12398074,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:12398061..12398074,+
|short_description=p@chr11:12398061..12398074,+
|description=CAGE_peak_at_chr11:12398061..12398074,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:12398061..12398074,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_at_chr11:12398061..12398074,+ | |||
|id=chr11:12398061..12398074,+ | |||
|ontology_enrichment_celltype=CL:0000136!9.02e-17!15;CL:0000325!3.14e-15!39;CL:0002334!4.87e-09!12;CL:0000055!3.85e-08!180;CL:0000147!2.40e-07!14;CL:0000148!2.58e-07!10;CL:0000541!2.58e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.28e-26;10!CL:0000136;1.63e-24;13!CL:0000147;1.46e-18;14!CL:0002567;2.75e-17;3!CL:0002615;5.72e-16;3!CL:0000710;1.06e-12;20!CL:0002617;2.46e-11;2!CL:0002570;1.95e-10;8!CL:0000075;3.76e-09;27!CL:0002521;3.54e-08;3!CL:0002579;7.77e-08;3!CL:0002580;1.27e-07;3!CL:0002566;5.57e-07;1!CL:0002334;6.02e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.59e-32,15;CL:0000148,2.25e-26,10;CL:0000541,2.25e-26,10;CL:0000147,1.44e-18,14;CL:0002567,2.76e-17,3;CL:0002615,8.02e-16,3;CL:0000710,1.06e-12,20;CL:0002617,1.85e-11,2;CL:0002570,2.70e-10,8;CL:0000075,3.75e-09,27;CL:0000333,8.49e-09,41;CL:0002521,3.68e-08,3;CL:0000219,6.19e-08,386;CL:0002579,7.14e-08,3;CL:0002580,7.39e-08,3;CL:0002334,4.47e-07,12;CL:0002077,4.57e-07,34;CL:0002566,5.58e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.15e-13!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!3.12e-09!12;UBERON:0000042!3.12e-09!12;UBERON:0003688!6.54e-09!6;UBERON:0002358!6.54e-09!6;UBERON:0003684!6.54e-09!6;UBERON:0001178!6.54e-09!6;UBERON:0001013!1.01e-08!14;UBERON:0004458!1.88e-08!49;UBERON:0000992!4.19e-08!13;UBERON:0002323!1.24e-07!46;UBERON:0005156!1.72e-07!59;UBERON:0000990!1.72e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.95e-21;6!UBERON:0002358;2.95e-21;6!UBERON:0003684;2.95e-21;6!UBERON:0001178;2.95e-21;6!UBERON:0001013;2.80e-17;14!UBERON:0004457;4.12e-14;9!UBERON:0000042;4.12e-14;9!UBERON:0000310;2.54e-08;10!UBERON:0002190;3.54e-08;3!UBERON:0001443;1.43e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.51e-21,6;UBERON:0002358,3.51e-21,6;UBERON:0003684,3.51e-21,6;UBERON:0001178,3.51e-21,6;UBERON:0001013,4.30e-17,14;UBERON:0004457,1.72e-10,12;UBERON:0000042,1.72e-10,12;UBERON:0000310,1.66e-08,10;UBERON:0002190,3.68e-08,3;UBERON:0001443,9.74e-08,11;UBERON:0002323,2.12e-07,46;UBERON:0004458,7.35e-07,49 | |||
|phase1_expression=1.81678379270557,2.35510576280081,2.81908808191942,1.0007329835313,1.34088328328186,0,2.53299878168311,4.42203911398782,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.794455084879313,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0,0.427114777637135,0.423863802319124,0,0.103052529238439,0.257640540045629,0,0.675105328965065,0.194874010322397,0,0.276149695926898,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9539377760091,11.8416411923066,14.0660936652056,3.4214489204541,4.52440967894623,7.50857644609794,12.2905366031149,0,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0,0,0,0.285955987316295,0.542621605391443,0,0.65147236858747,0.355391948742546,0,0.904318131178758,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,1.20378439891088,0,1.03473071292505,0.664225598535437,0,0.0868836144680828,0,0,0,0,0,0,0,0,1.73675465473144,1.84154367945675,0.280660094433074,2.56278298511402,1.53512174720011,0.64341568457443,0,0.154209693802656,0.177561725313127,0.657017248110473,0,0.348631135379878,0,0,0,0.574072240823034,0.364182336013434,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0.650756789328606,0.309123034943167,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0,0,0,0.464845549297286,0,0,0,0,0,0.55597265731176,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0.539617372749944,0.274537029736055,0.471249609382746,0.202182481573316,0,0,0,0.243713489631284,0,0.409499734223957,0.848432591722276,0,0,0.66343897524122,0,0.578775534266688,0.655894752046633,0,0,0,0.143411352204052,0,0,0.709522128141196,0.211107635297664,0.658589785919804,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0.23874448473769,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,1.08507746200627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520874984799877,0,0,0,0,0,0,0,0,0.923403102045565,0,0.23056390438806,0.179515288819544,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.872901148395775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72844298240254,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72008901684737,0.5013797880454,0.612691153526923,0.655745261419609,0,0,0,0,0,0,0,0,0,1.21319294033318,0,0,0,0,0.447764408660622,1.16856654923612,3.32883516901568,0.378806010550178,0.754703705257725,2.66943366478961,3.43260102595385,2.41969478021182,0.466311601748341,0.887130899937803,0.63718706865481,0.899606224327209,0.465788870628778,1.65882483136342,0.265841714557995,1.5652351854352,1.95334891696384,0.380805212168795,0.406870733204662,1.09109195521536,0.644463342254931,0.464033759878494,0.398095888698616,0,1.03018711554838,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.911579868532147,0,0.194860308839388,0,0.163565394255844,0.327609848846413,0,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,1.56302802246618,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.532214220975833,0,0,0,0.0657727735628491,0,0,0.470958557103084,0.157115589916002,0,0,0,0.47775168788705,0.0714765441766563,0,0,0.173858272302579,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0.430333232356058,0,0,0,0,0,0,2.32258743947446,0,0.665756774185513,0,0 | |phase1_expression=1.81678379270557,2.35510576280081,2.81908808191942,1.0007329835313,1.34088328328186,0,2.53299878168311,4.42203911398782,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.794455084879313,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0,0.427114777637135,0.423863802319124,0,0.103052529238439,0.257640540045629,0,0.675105328965065,0.194874010322397,0,0.276149695926898,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9539377760091,11.8416411923066,14.0660936652056,3.4214489204541,4.52440967894623,7.50857644609794,12.2905366031149,0,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0,0,0,0.285955987316295,0.542621605391443,0,0.65147236858747,0.355391948742546,0,0.904318131178758,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,1.20378439891088,0,1.03473071292505,0.664225598535437,0,0.0868836144680828,0,0,0,0,0,0,0,0,1.73675465473144,1.84154367945675,0.280660094433074,2.56278298511402,1.53512174720011,0.64341568457443,0,0.154209693802656,0.177561725313127,0.657017248110473,0,0.348631135379878,0,0,0,0.574072240823034,0.364182336013434,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0.650756789328606,0.309123034943167,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0,0,0,0.464845549297286,0,0,0,0,0,0.55597265731176,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0.539617372749944,0.274537029736055,0.471249609382746,0.202182481573316,0,0,0,0.243713489631284,0,0.409499734223957,0.848432591722276,0,0,0.66343897524122,0,0.578775534266688,0.655894752046633,0,0,0,0.143411352204052,0,0,0.709522128141196,0.211107635297664,0.658589785919804,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0.23874448473769,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,1.08507746200627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520874984799877,0,0,0,0,0,0,0,0,0.923403102045565,0,0.23056390438806,0.179515288819544,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.872901148395775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72844298240254,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72008901684737,0.5013797880454,0.612691153526923,0.655745261419609,0,0,0,0,0,0,0,0,0,1.21319294033318,0,0,0,0,0.447764408660622,1.16856654923612,3.32883516901568,0.378806010550178,0.754703705257725,2.66943366478961,3.43260102595385,2.41969478021182,0.466311601748341,0.887130899937803,0.63718706865481,0.899606224327209,0.465788870628778,1.65882483136342,0.265841714557995,1.5652351854352,1.95334891696384,0.380805212168795,0.406870733204662,1.09109195521536,0.644463342254931,0.464033759878494,0.398095888698616,0,1.03018711554838,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.911579868532147,0,0.194860308839388,0,0.163565394255844,0.327609848846413,0,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,1.56302802246618,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.532214220975833,0,0,0,0.0657727735628491,0,0,0.470958557103084,0.157115589916002,0,0,0,0.47775168788705,0.0714765441766563,0,0,0.173858272302579,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0.430333232356058,0,0,0,0,0,0,2.32258743947446,0,0.665756774185513,0,0 | ||
|short_description=p@chr11:12398061..12398074,+ | |||
}} | }} |
Latest revision as of 19:29, 23 July 2015
Short description: | p@chr11:12398061..12398074, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:12398061..12398074, + |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.59e-32 | 15 |
melanocyte | 2.25e-26 | 10 |
melanoblast | 2.25e-26 | 10 |
pigment cell | 1.44e-18 | 14 |
light melanocyte | 2.76e-17 | 3 |
adipocyte of omentum tissue | 8.02e-16 | 3 |
neurecto-epithelial cell | 1.06e-12 | 20 |
adipocyte of breast | 1.85e-11 | 2 |
mesenchymal stem cell of adipose | 2.70e-10 | 8 |
columnar/cuboidal epithelial cell | 3.75e-09 | 27 |
migratory neural crest cell | 8.49e-09 | 41 |
subcutaneous fat cell | 3.68e-08 | 3 |
motile cell | 6.19e-08 | 386 |
omentum preadipocyte | 7.14e-08 | 3 |
preadipocyte of the breast | 7.39e-08 | 3 |
preadipocyte | 4.47e-07 | 12 |
ecto-epithelial cell | 4.57e-07 | 34 |
dark melanocyte | 5.58e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.51e-21 | 6 |
peritoneum | 3.51e-21 | 6 |
abdominal cavity | 3.51e-21 | 6 |
visceral peritoneum | 3.51e-21 | 6 |
adipose tissue | 4.30e-17 | 14 |
cavity lining | 1.72e-10 | 12 |
serous membrane | 1.72e-10 | 12 |
breast | 1.66e-08 | 10 |
subcutaneous adipose tissue | 3.68e-08 | 3 |
chest | 9.74e-08 | 11 |
body cavity | 2.12e-07 | 46 |
body cavity or lining | 7.35e-07 | 49 |