FFCP PHASE1:Hg19::chr14:105886300..105886316,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9112 | |EntrezGene=9112 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7410 | |HGNC=7410 | ||
|TSSclassifier=strong | |||
|UniProt=E9PHA7 | |UniProt=E9PHA7 | ||
|association_with_transcript=25bp_to_ENST00000405646_5end | |association_with_transcript=25bp_to_ENST00000405646_5end | ||
|cluster_id=chr14:105886300..105886316,+ | |||
|description=CAGE_peak_2_at_MTA1_5end | |description=CAGE_peak_2_at_MTA1_5end | ||
|id=chr14:105886300..105886316,+ | |id=chr14:105886300..105886316,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.66e-11!71;CL:0002321!1.18e-09!248;CL:0000133!1.52e-09!59;CL:0000220!2.97e-09!246;CL:0000333!1.22e-07!41;CL:0002077!4.24e-07!33 | |ontology_enrichment_celltype=CL:0000221!1.66e-11!71;CL:0002321!1.18e-09!248;CL:0000133!1.52e-09!59;CL:0000220!2.97e-09!246;CL:0000333!1.22e-07!41;CL:0002077!4.24e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002077;1.35e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.65e-14,72;CL:0000133,2.52e-11,59;CL:0002321,3.61e-09,250;CL:0000333,4.57e-09,41;CL:0002077,1.82e-08,34;CL:0002319,6.69e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.79e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000119!7.93e-10!312;UBERON:0000483!1.29e-09!309;UBERON:0000924!7.70e-09!173;UBERON:0006601!7.70e-09!173;UBERON:0000481!4.98e-08!347;UBERON:0004121!5.25e-08!169;UBERON:0000073!8.00e-08!94;UBERON:0001016!8.00e-08!94;UBERON:0000477!1.93e-07!286;UBERON:0003056!2.51e-07!61;UBERON:0000922!5.56e-07!612 | |ontology_enrichment_uberon=UBERON:0000119!7.93e-10!312;UBERON:0000483!1.29e-09!309;UBERON:0000924!7.70e-09!173;UBERON:0006601!7.70e-09!173;UBERON:0000481!4.98e-08!347;UBERON:0004121!5.25e-08!169;UBERON:0000073!8.00e-08!94;UBERON:0001016!8.00e-08!94;UBERON:0000477!1.93e-07!286;UBERON:0003056!2.51e-07!61;UBERON:0000922!5.56e-07!612 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.56e-09,171;UBERON:0000924,1.56e-09,171;UBERON:0006601,1.56e-09,171;UBERON:0010371,1.10e-07,104;UBERON:0003056,5.33e-07,61;UBERON:0001016,5.54e-07,89;UBERON:0002346,6.19e-07,86 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,1.0007329835313,0,0,0,0.631719873426831,1.30592814099919,0.491467873003018,0.697801167972428,0.218441372130172,0.527533956456907,0.37129905888014,0.331397375727916,0.672325146451775,1.20538905604795,0.730310090387373,0.487932798790507,2.21617904538218,1.22400414746552,2.5076377718247,2.28988789704845,2.46373965131192,0.502170558379211,0.382067028739756,0.738905305049512,0.314843125254717,0,0.383829398097213,0.309632246632152,0.919421224478927,0.90361775633475,0.739508020333575,0.619737604642413,0.853015394924529,0.587200878669695,0,0.601633342410425,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0.411167888021826,0.309706370895104,0.575384784644301,0.256160706529101,0,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0,0,0.320929027076094,1.91801137739712,0,0,0,0,0,0,0.75374599577023,0.521482918420201,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,1.68152568894461,0,0.196709770113833,0,0,0.167186495390678,0.32592226663359,0,0,0,0.883817722424512,0,0.541607727530031,0.25618263945135,0.130059347559878,0.164437904603676,0,0,0,0.535081656179426,0,0.566546713487831,0.383220493601921,0,0.253019692019503,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0.604820229674197,0.267440195783507,0.724122019413995,0,1.34140171940727,0.639312809217652,0.361439152384566,1.50401373190767,1.01392563272577,0,0.486634870302636,1.22895262313288,0.886917589850256,1.40535657109002,1.44076983047484,1.09288586487763,1.48313777113772,0.324547393654683,0.174129737299267,0.132957960518865,0.238490624305342,0,1.11437250398869,2.38514888840046,0.860234595106124,2.08284300964557,0,0.419499436209906,1.6507082516404,1.04497483268405,1.55050055501597,1.06729878806013,1.00416183829401,1.20848795132744,0,2.92874469057803,1.10298924103761,1.62028389576352,1.16089646769304,0.673588117878509,1.0135033243499,1.53316637465883,0,2.38162267109529,0,0,0.872188104285069,0.993943903390637,1.01304409331664,0.926864265692532,1.43418310374407,0.354668382198357,2.80338800071154,1.06748995729705,0.98667019366864,0.311211035399766,0.808264032418128,0.980771418680752,1.05950199351452,0.576175924479999,2.10889288650417,0.624320153660641,0.570471821544449,0.747243402759005,1.52664848236894,0.809364721840658,1.68540968042698,0.204154171254893,1.10550885580591,1.03325781175765,0,0.989067717114227,0,1.43723628363248,0.336672227908132,1.00094815897571,0.831192346452549,0,0.612975591598039,0.751190294532984,0.453728732640084,0.358779271377724,0.640672166455702,0.635795703478686,0.600182192168805,0.412210116953756,0.772921620136887,0.18611685633159,0.337552664482532,0.584622030967192,0.252433774244115,0.0920498986422993,0.646584227275248,0,0.302256294682921,0.339121184620975,0.193260853163297,0,0.573609190778008,1.09776335516636,1.32529768321485,1.74290914304278,1.14027160516907,1.26160425437814,1.82488679537915,0,0.643240938192885,2.76269842704961,0,0,1.18306800039844,2.02301628093722,1.44606617930089,0.992645754591546,1.30727666455444,1.18635309555548,1.34831308160164,0.392442930250692,1.92373578473195,1.4763109092493,0,1.2347220339942,1.47008711385542,0,0,0,2.20731549707325,0,1.02940686179115,1.20725313949488,3.37205259772859,1.40740561376283,1.29623823221941,0.651616610620649,1.03993478527958,0,1.62302566965108,0.234817388471643,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0.93733833986777,0,1.27597587518148,0.447792613514241,0.871901815541886,1.91691339582606,0,0.352193736052904,0.621984346622316,0.288239906833923,0.37872730027914,0.888970520090367,1.90994212779139,2.34434894420094,1.71072446022705,1.33675740514321,0.300343057843917,0.857479297891735,0.448524337381443,0.87192013766656,0.95339771567235,0.904902010304444,0,0,0.531876233169741,0,0.771622122786426,2.83698264046557,1.5985330740966,0.57191197463259,0.542621605391443,2.46972101034231,0.65147236858747,0.710783897485092,0,0.301439377059586,0,0.499864955910285,0,0.502257091432126,0,0.479249710983165,0,0,0.434343920002738,0.61642896765115,0.179060963239896,0.336255431980582,0.197030760201927,0.431255149719035,0.385029108839245,1.01637849688985,0,1.54657762555539,2.84777651068393,5.10351001322531,0,0,0,1.34960640891054,1.00034104211935,0.813795071099207,1.03985430765404,0.892144943985809,1.57702415033935,0.468565659970853,0.300946099727719,9.09630016223939,0,0.664225598535437,0.184369168541703,0.60818530127658,3.91602314925481,1.71571711905428,0,0.431428401637234,0.640365346820666,0.303127571446259,0,0.30239029332968,0.744323423456331,0.61384789315225,0.561320188866147,0.256278298511402,0,0.482561763430822,0,0.462629081407967,0.355123450626254,0.574890092096664,1.03850885836724,0.348631135379878,0.725156697549733,0.200506470303285,0.920809889358963,0.574072240823034,0.546273504020151,0.524497659837696,1.35359883872224,0.15403067420883,1.56869953835371,0,0.527758144464379,2.27466768141793,0.850468526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| ||
|short_description=p2@MTA1 | |short_description=p2@MTA1 | ||
}} | }} |
Latest revision as of 18:58, 18 September 2015
Short description: | p2@MTA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MTA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000405646_5end |
EntrezGene: | MTA1 |
HGNC: | 7410 |
UniProt: | E9PHA7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.65e-14 | 72 |
neurectodermal cell | 2.52e-11 | 59 |
embryonic cell | 3.61e-09 | 250 |
migratory neural crest cell | 4.57e-09 | 41 |
ecto-epithelial cell | 1.82e-08 | 34 |
neural cell | 6.69e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.56e-09 | 171 |
ectoderm | 1.56e-09 | 171 |
presumptive ectoderm | 1.56e-09 | 171 |
ecto-epithelium | 1.10e-07 | 104 |
pre-chordal neural plate | 5.33e-07 | 61 |
nervous system | 5.54e-07 | 89 |
neurectoderm | 6.19e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.79e-07 | 10 |