FFCP PHASE1:Hg19::chr19:51857495..51857576,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:51857495..51857576,- | |||
|coexpression_cluster_id=C3246 | |||
|description=CAGE_peak_at_chr19:51857495..51857576,- | |description=CAGE_peak_at_chr19:51857495..51857576,- | ||
|id=chr19:51857495..51857576,- | |id=chr19:51857495..51857576,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;8.38e-15;5!CL:0002602;4.03e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.15e-14,5;CL:0002602,4.43e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.60e-10;11!UBERON:0009497;1.81e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!4.32e-12!347;UBERON:0004921!7.09e-07!129;UBERON:0004185!7.09e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.02e-09;5!UBERON:0002216;1.02e-09;5!UBERON:0011134;1.02e-09;5!UBERON:0002209;1.02e-09;5!UBERON:0002213;1.02e-09;5!UBERON:0007844;1.02e-09;5!UBERON:0011138;1.02e-09;5!UBERON:0001130;1.02e-09;5!UBERON:0001066;1.02e-09;5!UBERON:0001468;1.02e-09;5!UBERON:0002107;3.32e-09;19!UBERON:0006925;3.32e-09;19!UBERON:0002365;1.88e-07;31!UBERON:0002330;1.88e-07;31!UBERON:0006444;4.03e-07;2!UBERON:0001995;4.03e-07;2!UBERON:0004715;4.03e-07;2!UBERON:0005090;8.66e-07;2!UBERON:0001630;8.66e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.69e-09,5;UBERON:0002216,1.69e-09,5;UBERON:0011134,1.69e-09,5;UBERON:0002209,1.69e-09,5;UBERON:0002213,1.69e-09,5;UBERON:0005856,1.69e-09,5;UBERON:0005866,1.69e-09,5;UBERON:0005863,1.69e-09,5;UBERON:0007844,1.69e-09,5;UBERON:0011138,1.69e-09,5;UBERON:0001130,1.69e-09,5;UBERON:0001066,1.69e-09,5;UBERON:0001468,1.69e-09,5;UBERON:0002107,3.05e-09,19;UBERON:0006925,3.05e-09,19;UBERON:0008836,3.05e-09,19;UBERON:0008835,8.93e-08,22;UBERON:0003894,8.93e-08,22;UBERON:0002365,9.55e-08,31;UBERON:0002330,9.55e-08,31;UBERON:0009854,2.26e-07,23;UBERON:0006444,4.43e-07,2;UBERON:0001995,4.43e-07,2;UBERON:0004715,4.43e-07,2;UBERON:0005090,6.51e-07,2;UBERON:0001630,6.51e-07,2;UBERON:0011216,8.99e-07,223 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.140954404095971,0,0,0,0,0.631719873426831,0,0,1.39560233594486,0.218441372130172,0.527533956456907,2.10402800032079,3.64537113300707,0,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0.0787107813136792,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0.293600439334847,0,0,0,0,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0,0.334372990781356,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0.25618263945135,0,0.164437904603676,0,0,0,0,1.04535523804977,0,0.383220493601921,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0,0,0,0.434539556882471,0,0,0,0,0.175669571386252,1.11332214173056,0,0.370784442784429,0,0,0.26591592103773,0,0.571994910780128,0,0,0,0,0.56530794192401,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,1.68203280042692,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0.908144565869588,0.576175924479999,0.234321431833797,0.312160076830321,0,0.448346041655403,0.23486899728753,0,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0,0.226864366320042,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0.0974370051611986,0,0.184099797284599,0,0,0.10075209822764,0,0,0,0,1.34171076742555,1.19276791489337,4.53156377191122,5.18305275076852,3.02785021050754,1.45990943630332,1.56449532329816,0,0,0,0,0.236613600079688,0.337169380156203,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,1.47008711385542,0,0,0.590789906681404,0,23.1218264461053,0,0,0,0.100528972411631,0,0.977424915930974,0,1.44331342025273,2.20267769452646,0,0,0,0.570762456703795,0,0,0.246217006087397,0,0.445893486866185,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0.381988425558278,0,0,0.205654985406647,0,0,0.224262168690721,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,1.42156779497018,0,0,0,0.099972991182057,0,0,0,0,0,0,0.579125226670317,0.61642896765115,0.358121926479791,0.224170287987055,0,0,0,0,0,3.09315525111078,1.00509759200609,0,0,0,0,2.82190430954022,1.00034104211935,0.271265023699736,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0.368738337083406,0.173767228936166,0.783204629850962,0.686286847621712,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0.232420756919918,31.5443163434134,0.200506470303285,0,0.229628896329213,0,0.262248829918848,0,0.15403067420883,0,0,0.105551628892876,0,0.510281115829547,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,1.79515087581472,0,0.325378394664303,0.412164046590889,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0.924291702687866,0.460511024178389,0.413509717453592,0.322260734604821,0.580066775656914,0.0852266274161009,0,0.165284915360978,0,0,0,0.464845549297286,0,0,0.616067160352178,0,0,0.18532421910392,0.429374660225974,0.372158369359667,0,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0,1.58510321173008,0,0.48763373908959,0,1.05650146756755,0,0,0,1.10273068709225,0,0.438450885253763,1.15755106853338,1.31178950409327,0,0,0.281695602532241,0,0.0982490410131212,0.35667105148125,0.709522128141196,0,0,1.89736586882858,0.349934720244983,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0,5.01268954180134,0.338583555603207,0,0.201799707191048,0,0,0,0,0.166849141711909,0.19538809540204,0.835218521685727,0,0,0,0,0.37428108081644,0,0.121360521749513,0.222886768554957,0.284136146806413,0,0.890894042497916,0,1.9882952955326,0,0,0,0,0.19924798825107,0.276283915531148,0,0.715880777515084,0,0,0.179736702294654,0.179021174675609,0.511572370226872,0.0986434056369336,0,0,1.93866549219044,0.185536196323703,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0.291604613383254,0,0,0.241192877250816,0,0.221158519862449,0.886642856860642,2.19385397153973,0,0,0,0.113942055847001,0.46112780877612,0,0,0.638002319463839,0.183195186803725,0,0,0.31396051279005,0.332423363800313,0,0,0.167821586975843,0.37950746544837,0,0.210998064528027,0,28.2706142867882,0,0,0.265372693510018,0,0,0.123563938946503,0,0.539209063845416,1.60515529459758,0.468528891450678,0.182454789215666,0.19566461893209,0,0.394584402849391,1.20990716048664,5.20323694771833,0.379119477770928,0.150323419414493,0,0,0.330991955875499,0.627865836814451,0,0,0,0.520679215005393,0.0979923974143777,0,0.34945333648406,0.171986032471617,0.0967563312890851,0.219267951258557,0.164230914106418,0,0.0882561266915003,2.9377496301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| ||
|short_description=p@chr19:51857495..51857576,- | |short_description=p@chr19:51857495..51857576,- | ||
}} | }} |
Latest revision as of 16:40, 27 July 2015
Short description: | p@chr19:51857495..51857576, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:51857495..51857576, - |
Coexpression cluster: | C3246_hepatoma_hepatocellular_rhabdomyosarcoma_hepatoblastoma_liver_Prostate_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.15e-14 | 5 |
annulus pulposus cell | 4.43e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 1.69e-09 | 5 |
symphysis | 1.69e-09 | 5 |
nonsynovial joint | 1.69e-09 | 5 |
fibrous joint | 1.69e-09 | 5 |
cartilaginous joint | 1.69e-09 | 5 |
developing mesenchymal condensation | 1.69e-09 | 5 |
pre-cartilage condensation | 1.69e-09 | 5 |
cartilaginous condensation | 1.69e-09 | 5 |
cartilage element | 1.69e-09 | 5 |
post-cranial axial skeletal system | 1.69e-09 | 5 |
vertebral column | 1.69e-09 | 5 |
intervertebral disk | 1.69e-09 | 5 |
intervertebral joint | 1.69e-09 | 5 |
liver | 3.05e-09 | 19 |
digestive gland | 3.05e-09 | 19 |
liver bud | 3.05e-09 | 19 |
hepatic diverticulum | 8.93e-08 | 22 |
liver primordium | 8.93e-08 | 22 |
exocrine gland | 9.55e-08 | 31 |
exocrine system | 9.55e-08 | 31 |
digestive tract diverticulum | 2.26e-07 | 23 |
annulus fibrosus | 4.43e-07 | 2 |
fibrocartilage | 4.43e-07 | 2 |
annulus fibrosus disci intervertebralis | 4.43e-07 | 2 |
muscle structure | 6.51e-07 | 2 |
muscle organ | 6.51e-07 | 2 |
organ system subdivision | 8.99e-07 | 223 |