FFCP PHASE1:Hg19::chr14:36989427..36989442,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7080 | |EntrezGene=7080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11825 | |HGNC=11825 | ||
|TSSclassifier=strong | |||
|UniProt=P43699 | |UniProt=P43699 | ||
|association_with_transcript=0bp_to_ENST00000354822,NM_001079668_5end | |association_with_transcript=0bp_to_ENST00000354822,NM_001079668_5end | ||
|cluster_id=chr14:36989427..36989442,- | |||
|coexpression_cluster_id=C1394 | |||
|description=CAGE_peak_1_at_NKX2-1_5end | |description=CAGE_peak_1_at_NKX2-1_5end | ||
|id=chr14:36989427..36989442,- | |id=chr14:36989427..36989442,- | ||
|ontology_enrichment_celltype=CL:0002076!6.81e-12!43;CL:0002368!1.23e-08!13;CL:0000223!1.26e-08!59;CL:0000082!2.58e-07!19;CL:0000066!3.63e-07!254 | |ontology_enrichment_celltype=CL:0002076!6.81e-12!43;CL:0002368!1.23e-08!13;CL:0000223!1.26e-08!59;CL:0000082!2.58e-07!19;CL:0000066!3.63e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000322;3.31e-09;3!CL:0000082;3.67e-08;19!CL:0002553;7.50e-08;1!CL:0000167;1.56e-07;1!CL:0000164;1.56e-07;1!CL:0000502;1.56e-07;1!CL:0000172;1.56e-07;1!CL:0000173;1.56e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,3.52e-09,3;CL:0000082,3.76e-08,19;CL:0002553,7.50e-08,1;CL:0000167,1.51e-07,1;CL:0000164,1.51e-07,1;CL:0000502,1.51e-07,1;CL:0000172,1.51e-07,1;CL:0000173,1.51e-07,1;CL:0002351,1.51e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.97e-20;5!UBERON:0008947;5.96e-10;29!UBERON:0001041;1.37e-09;30!CL:0002351;1.56e-07;1 | |||
|ontology_enrichment_disease=DOID:305!3.08e-13!106;DOID:0050687!1.87e-09!143;DOID:162!2.55e-07!235;DOID:0050615!4.96e-07!16;DOID:14566!5.68e-07!239;DOID:3905!6.84e-07!9 | |ontology_enrichment_disease=DOID:305!3.08e-13!106;DOID:0050687!1.87e-09!143;DOID:162!2.55e-07!235;DOID:0050615!4.96e-07!16;DOID:14566!5.68e-07!239;DOID:3905!6.84e-07!9 | ||
|ontology_enrichment_disease_v019=DOID:0050615;8.31e-10;16!DOID:3112;8.53e-08;1!DOID:4430;1.56e-07;1!DOID:0050619;2.21e-07;1!DOID:1357;2.21e-07;1!DOID:3151;3.61e-07;1!DOID:3149;3.61e-07;1!DOID:1324;4.65e-07;15!DOID:3905;5.31e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:0050615,8.70e-10,16;DOID:3112,8.54e-08,1;DOID:4430,1.51e-07,1;DOID:0050619,2.50e-07,1;DOID:1357,2.50e-07,1;DOID:1324,4.68e-07,15;DOID:3151,4.90e-07,1;DOID:3149,4.90e-07,1;DOID:3905,5.36e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0008947!1.91e-20!38;UBERON:0003258!1.91e-20!38;UBERON:0000065!4.35e-20!53;UBERON:0001004!2.37e-17!72;UBERON:0004119!3.25e-13!169;UBERON:0000925!3.25e-13!169;UBERON:0006595!3.25e-13!169;UBERON:0002048!4.37e-12!22;UBERON:0000117!4.37e-12!22;UBERON:0000171!4.37e-12!22;UBERON:0000170!4.37e-12!22;UBERON:0005597!4.37e-12!22;UBERON:0000118!4.37e-12!22;UBERON:0001007!1.72e-11!155;UBERON:0001555!1.72e-11!155;UBERON:0007026!1.72e-11!155;UBERON:0001737!2.37e-11!9;UBERON:0005178!2.76e-11!34;UBERON:0002224!2.76e-11!34;UBERON:0005181!7.28e-11!35;UBERON:0000072!1.11e-10!46;UBERON:0005911!2.77e-09!82;UBERON:0002046!3.61e-09!5;UBERON:0004117!3.61e-09!5;UBERON:0007689!3.61e-09!5;UBERON:0007123!3.61e-09!5;UBERON:0003091!3.61e-09!5;UBERON:0005153!6.46e-09!37;UBERON:0004921!1.16e-08!129;UBERON:0004185!1.16e-08!129;UBERON:0000077!5.67e-08!130;UBERON:0003350!2.06e-07!5;UBERON:0004802!2.58e-07!19;UBERON:0000115!2.58e-07!19;UBERON:0001041!3.94e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;2.97e-20;5!UBERON:0002048;3.05e-17;22!UBERON:0000117;3.05e-17;22!UBERON:0000171;3.05e-17;22!UBERON:0000170;3.05e-17;22!UBERON:0005178;2.59e-09;34!UBERON:0002224;2.59e-09;34!UBERON:0004821;3.31e-09;3!UBERON:0007499;3.31e-09;3!UBERON:0003215;3.31e-09;3!UBERON:0010368;3.31e-09;3!UBERON:0009911;3.31e-09;3!UBERON:0002299;3.31e-09;3!UBERON:0006524;3.31e-09;3!UBERON:0008874;3.31e-09;3!UBERON:0002169;3.31e-09;3!UBERON:0004894;3.31e-09;3!UBERON:0005181;1.39e-08;35!UBERON:0004802;3.67e-08;19!UBERON:0000115;3.67e-08;19!UBERON:0002171;1.18e-07;1!UBERON:0006518;1.18e-07;1!UBERON:0008949;1.18e-07;1!UBERON:0000101;1.18e-07;1!UBERON:0002167;1.18e-07;1!UBERON:0001764;2.21e-07;1!UBERON:0001825;2.21e-07;1!UBERON:0009856;4.16e-07;4!UBERON:0004807;5.21e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.83e-20,5;UBERON:0004117,2.83e-20,5;UBERON:0007689,2.83e-20,5;UBERON:0007123,2.83e-20,5;UBERON:0003091,2.83e-20,5;UBERON:0002048,3.15e-17,22;UBERON:0000117,3.15e-17,22;UBERON:0000171,3.15e-17,22;UBERON:0000170,3.15e-17,22;UBERON:0005597,3.15e-17,22;UBERON:0000118,3.15e-17,22;UBERON:0005911,5.28e-14,82;UBERON:0005153,2.33e-12,37;UBERON:0005178,1.01e-10,34;UBERON:0002224,1.01e-10,34;UBERON:0005181,2.22e-10,35;UBERON:0008947,1.82e-09,38;UBERON:0003258,1.82e-09,38;UBERON:0005157,2.07e-09,47;UBERON:0009722,2.72e-09,11;UBERON:0007690,2.72e-09,11;UBERON:0004821,3.52e-09,3;UBERON:0003215,3.52e-09,3;UBERON:0010368,3.52e-09,3;UBERON:0009911,3.52e-09,3;UBERON:0002299,3.52e-09,3;UBERON:0006524,3.52e-09,3;UBERON:0008874,3.52e-09,3;UBERON:0002169,3.52e-09,3;UBERON:0004894,3.52e-09,3;UBERON:0004802,3.76e-08,19;UBERON:0000115,3.76e-08,19;UBERON:0002171,1.18e-07,1;UBERON:0006518,1.18e-07,1;UBERON:0008949,1.18e-07,1;UBERON:0000101,1.18e-07,1;UBERON:0002167,1.18e-07,1;UBERON:0001007,1.38e-07,145;UBERON:0001555,1.38e-07,145;UBERON:0007026,1.38e-07,145;UBERON:0001764,2.50e-07,1;UBERON:0001825,2.50e-07,1 | |||
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| ||
|short_description=p1@NKX2-1 | |short_description=p1@NKX2-1 | ||
}} | }} |
Latest revision as of 22:34, 19 September 2015
Short description: | p1@NKX2-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NKX2-1_5end |
Coexpression cluster: | C1394_large_bronchioalveolar_prostate_nonsmall_papillary_small_Alveolar |
Association with transcript: | 0bp_to_ENST00000354822, NM_001079668_5end |
EntrezGene: | NKX2-1 |
HGNC: | 11825 |
UniProt: | P43699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 3.52e-09 | 3 |
epithelial cell of lung | 3.76e-08 | 19 |
lung fibroblast | 7.50e-08 | 1 |
peptide hormone secreting cell | 1.51e-07 | 1 |
enteroendocrine cell | 1.51e-07 | 1 |
type D enteroendocrine cell | 1.51e-07 | 1 |
somatostatin secreting cell | 1.51e-07 | 1 |
pancreatic D cell | 1.51e-07 | 1 |
progenitor cell of endocrine pancreas | 1.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
respiratory system cancer | 8.70e-10 | 16 |
papillary adenocarcinoma | 8.54e-08 | 1 |
somatostatinoma | 1.51e-07 | 1 |
paranasal sinus cancer | 2.50e-07 | 1 |
maxillary sinus cancer | 2.50e-07 | 1 |
lung cancer | 4.68e-07 | 15 |
skin squamous cell carcinoma | 4.90e-07 | 1 |
keratoacanthoma | 4.90e-07 | 1 |
lung carcinoma | 5.36e-07 | 9 |