FFCP PHASE1:Hg19::chr14:48729843..48729847,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:48729843..48729847,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr14:48729843..48729847,- | |description=CAGE_peak_at_chr14:48729843..48729847,- | ||
|id=chr14:48729843..48729847,- | |id=chr14:48729843..48729847,- | ||
|ontology_enrichment_celltype=CL:0002322!4.01e-59!5;CL:0000540!2.07e-18!6;CL:0000031!2.07e-18!6;CL:0000404!2.07e-18!6;CL:0002541!2.04e-16!3;CL:0000039!1.07e-15!7;CL:0000586!1.07e-15!7;CL:0000047!5.77e-14!8;CL:0000148!2.55e-11!10;CL:0000541!2.55e-11!10;CL:0000147!3.10e-08!14 | |ontology_enrichment_celltype=CL:0002322!4.01e-59!5;CL:0000540!2.07e-18!6;CL:0000031!2.07e-18!6;CL:0000404!2.07e-18!6;CL:0002541!2.04e-16!3;CL:0000039!1.07e-15!7;CL:0000586!1.07e-15!7;CL:0000047!5.77e-14!8;CL:0000148!2.55e-11!10;CL:0000541!2.55e-11!10;CL:0000147!3.10e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.87e-98;5!CL:0002321;5.17e-33;15!CL:0000148;1.78e-18;10!CL:0000540;2.33e-14;6!CL:0000404;2.33e-14;6!CL:0000147;2.11e-13;14!CL:0000039;2.74e-12;7!CL:0000586;2.74e-12;7!CL:0000710;1.42e-09;20!CL:0002541;7.02e-08;3!CL:0000075;3.06e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.17e-98,5;CL:0000148,1.73e-18,10;CL:0000541,1.73e-18,10;CL:0000540,2.49e-14,6;CL:0000031,2.49e-14,6;CL:0000404,2.49e-14,6;CL:0000147,2.07e-13,14;CL:0000039,2.66e-12,7;CL:0000586,2.66e-12,7;CL:0000047,5.41e-11,8;CL:0000710,1.40e-09,20;CL:0000133,2.78e-08,59;CL:0002541,7.26e-08,3;CL:0000075,3.02e-07,27;CL:0000221,7.82e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;2.33e-14;6!UBERON:0009117;6.94e-09;10!UBERON:0005564;6.94e-09;10 | |||
|ontology_enrichment_disease=DOID:3095!9.02e-09!22;DOID:2994!9.02e-09!22 | |ontology_enrichment_disease=DOID:3095!9.02e-09!22;DOID:2994!9.02e-09!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!2.04e-16!3;UBERON:0000920!2.04e-16!3;UBERON:0003124!2.15e-15!7;UBERON:0000473!8.19e-14!8;UBERON:0005631!2.01e-13!14;UBERON:0000158!2.01e-13!14;UBERON:0003135!3.34e-10!11;UBERON:0000478!6.31e-08!24 | |ontology_enrichment_uberon=UBERON:0000476!2.04e-16!3;UBERON:0000920!2.04e-16!3;UBERON:0003124!2.15e-15!7;UBERON:0000473!8.19e-14!8;UBERON:0005631!2.01e-13!14;UBERON:0000158!2.01e-13!14;UBERON:0003135!3.34e-10!11;UBERON:0000478!6.31e-08!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;9.06e-12;49!UBERON:0000473;7.12e-11;8!UBERON:0003135;3.69e-08;11!UBERON:0003124;7.02e-08;3!UBERON:0000920;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.94e-11,8;UBERON:0003135,3.63e-08,11;UBERON:0000920,7.26e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97671160035017,1.72288698817931,3.95059405756363,1.45125477021519,4.03713361401005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,3.57602535152808,6.23160507043778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633492505057185,0,2.93939145792117,0.0918948995348449,3.76061308938563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97671160035017,1.72288698817931,3.95059405756363,1.45125477021519,4.03713361401005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,3.57602535152808,6.23160507043778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633492505057185,0,2.93939145792117,0.0918948995348449,3.76061308938563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:48729843..48729847,- | |short_description=p@chr14:48729843..48729847,- | ||
}} | }} |
Latest revision as of 20:46, 24 July 2015
Short description: | p@chr14:48729843..48729847, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:48729843..48729847, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.17e-98 | 5 |
melanocyte | 1.73e-18 | 10 |
melanoblast | 1.73e-18 | 10 |
neuron | 2.49e-14 | 6 |
neuroblast | 2.49e-14 | 6 |
electrically signaling cell | 2.49e-14 | 6 |
pigment cell | 2.07e-13 | 14 |
germ line cell | 2.66e-12 | 7 |
germ cell | 2.66e-12 | 7 |
neuronal stem cell | 5.41e-11 | 8 |
neurecto-epithelial cell | 1.40e-09 | 20 |
neurectodermal cell | 2.78e-08 | 59 |
chorionic membrane mesenchymal stem cell | 7.26e-08 | 3 |
columnar/cuboidal epithelial cell | 3.02e-07 | 27 |
ectodermal cell | 7.82e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 6.94e-11 | 8 |
male reproductive organ | 3.63e-08 | 11 |
egg chorion | 7.26e-08 | 3 |