FFCP PHASE1:Hg19::chr15:102347644..102347653,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:102347644..102347653,+ | |||
|description=CAGE_peak_at_chr15:102347644..102347653,+ | |description=CAGE_peak_at_chr15:102347644..102347653,+ | ||
|id=chr15:102347644..102347653,+ | |id=chr15:102347644..102347653,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.84e-13!180;CL:0000057!2.47e-09!75;CL:0002620!1.70e-07!23;CL:1000507!2.44e-07!12;CL:1000494!2.44e-07!12;CL:1000497!8.68e-07!18;CL:0002518!8.68e-07!18 | |ontology_enrichment_celltype=CL:0000055!9.84e-13!180;CL:0000057!2.47e-09!75;CL:0002620!1.70e-07!23;CL:1000507!2.44e-07!12;CL:1000494!2.44e-07!12;CL:1000497!8.68e-07!18;CL:0002518!8.68e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.19e-12;10!CL:1000494;1.19e-12;10!CL:1000497;4.45e-12;17!CL:0002518;4.45e-12;17!CL:0000239;1.65e-08;3!CL:1000615;1.65e-08;3!CL:0002567;1.65e-08;3!CL:0002306;1.65e-08;3!CL:0000075;3.37e-08;27!CL:1000449;4.30e-08;15!CL:0002556;6.31e-08;6!CL:0000243;3.88e-07;15!CL:0000125;3.88e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.71e-12,10;CL:1000494,1.71e-12,10;CL:1000497,5.83e-12,17;CL:0002518,5.83e-12,17;CL:0000333,1.44e-09,41;CL:0002567,9.82e-09,3;CL:0000239,1.84e-08,3;CL:1000615,1.84e-08,3;CL:0002306,1.84e-08,3;CL:0000075,2.76e-08,27;CL:1000449,5.39e-08,15;CL:0002556,5.71e-08,6;CL:0000243,3.42e-07,15;CL:0000125,3.42e-07,15;CL:0000030,3.42e-07,15;CL:0000339,3.42e-07,15;CL:0000148,8.93e-07,10;CL:0000541,8.93e-07,10;CL:0000057,9.98e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000339;3.88e-07;15 | |||
|ontology_enrichment_disease=DOID:14566!5.04e-09!239;DOID:162!3.68e-08!235;DOID:120!6.26e-07!27 | |ontology_enrichment_disease=DOID:14566!5.04e-09!239;DOID:162!3.68e-08!235;DOID:120!6.26e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:1115;1.23e-10;20!DOID:201;2.80e-08;6!DOID:0060100;2.80e-08;6!DOID:3093;4.25e-08;11!DOID:1909;2.08e-07;2!DOID:4231;9.34e-07;2!DOID:1907;9.34e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,1.22e-10,20;DOID:201,2.97e-08,6;DOID:0060100,2.97e-08,6;DOID:3093,3.40e-08,11;DOID:1909,2.09e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0009773!2.44e-07!12;UBERON:0001231!2.44e-07!12;UBERON:0004810!2.44e-07!12;UBERON:0003102!5.59e-07!95 | |ontology_enrichment_uberon=UBERON:0009773!2.44e-07!12;UBERON:0001231!2.44e-07!12;UBERON:0004810!2.44e-07!12;UBERON:0003102!5.59e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.19e-12;10!UBERON:0009773;1.19e-12;10!UBERON:0001231;1.19e-12;10!UBERON:0004810;1.19e-12;10!UBERON:0002113;6.10e-12;24!UBERON:0011143;6.10e-12;24!UBERON:0000489;1.77e-09;29!UBERON:0006554;4.38e-09;30!UBERON:0001008;4.38e-09;30!UBERON:0006853;1.65e-08;3!UBERON:0007685;1.65e-08;3!UBERON:0004134;1.65e-08;3!UBERON:0006555;4.30e-08;15!UBERON:0004819;4.30e-08;15!UBERON:0001285;4.30e-08;15!UBERON:0007684;4.30e-08;15!UBERON:0001758;6.31e-08;6!UBERON:0003672;6.31e-08;6!UBERON:0003129;8.65e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.71e-12,10;UBERON:0002113,9.37e-11,26;UBERON:0003918,9.37e-11,26;UBERON:0011143,9.37e-11,26;UBERON:0005095,9.37e-11,26;UBERON:0007687,9.37e-11,26;UBERON:0000489,1.20e-08,31;UBERON:0006853,1.84e-08,3;UBERON:0007685,1.84e-08,3;UBERON:0004134,1.84e-08,3;UBERON:0004211,5.39e-08,15;UBERON:0009773,5.39e-08,15;UBERON:0001231,5.39e-08,15;UBERON:0001285,5.39e-08,15;UBERON:0007684,5.39e-08,15;UBERON:0004208,5.39e-08,15;UBERON:0001758,5.71e-08,6;UBERON:0003672,5.71e-08,6;UBERON:0006555,1.96e-07,16;UBERON:0004819,1.96e-07,16;UBERON:0003129,7.95e-07,7 | |||
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|short_description=p@chr15:102347644..102347653,+ | |short_description=p@chr15:102347644..102347653,+ | ||
}} | }} |
Latest revision as of 00:21, 25 July 2015
Short description: | p@chr15:102347644..102347653, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:102347644..102347653, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.71e-12 | 10 |
nephron tubule epithelial cell | 1.71e-12 | 10 |
kidney cell | 5.83e-12 | 17 |
kidney epithelial cell | 5.83e-12 | 17 |
migratory neural crest cell | 1.44e-09 | 41 |
light melanocyte | 9.82e-09 | 3 |
brush border epithelial cell | 1.84e-08 | 3 |
kidney cortex tubule cell | 1.84e-08 | 3 |
epithelial cell of proximal tubule | 1.84e-08 | 3 |
columnar/cuboidal epithelial cell | 2.76e-08 | 27 |
epithelial cell of nephron | 5.39e-08 | 15 |
fibroblast of periodontium | 5.71e-08 | 6 |
glial cell (sensu Vertebrata) | 3.42e-07 | 15 |
glial cell | 3.42e-07 | 15 |
glioblast | 3.42e-07 | 15 |
glioblast (sensu Vertebrata) | 3.42e-07 | 15 |
melanocyte | 8.93e-07 | 10 |
melanoblast | 8.93e-07 | 10 |
fibroblast | 9.98e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.71e-12 | 10 |
kidney | 9.37e-11 | 26 |
kidney mesenchyme | 9.37e-11 | 26 |
upper urinary tract | 9.37e-11 | 26 |
kidney rudiment | 9.37e-11 | 26 |
kidney field | 9.37e-11 | 26 |
cavitated compound organ | 1.20e-08 | 31 |
renal cortex tubule | 1.84e-08 | 3 |
region of nephron tubule | 1.84e-08 | 3 |
proximal tubule | 1.84e-08 | 3 |
nephron epithelium | 5.39e-08 | 15 |
renal tubule | 5.39e-08 | 15 |
nephron tubule | 5.39e-08 | 15 |
nephron | 5.39e-08 | 15 |
uriniferous tubule | 5.39e-08 | 15 |
nephrogenic mesenchyme | 5.39e-08 | 15 |
periodontium | 5.71e-08 | 6 |
dentition | 5.71e-08 | 6 |
excretory tube | 1.96e-07 | 16 |
kidney epithelium | 1.96e-07 | 16 |
skull | 7.95e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 1.22e-10 | 20 |
connective tissue cancer | 2.97e-08 | 6 |
musculoskeletal system cancer | 2.97e-08 | 6 |
nervous system cancer | 3.40e-08 | 11 |
melanoma | 2.09e-07 | 2 |