FFCP PHASE1:Hg19::chr11:34644466..34644467,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:34644466..34644467,+
|short_description=p@chr11:34644466..34644467,+
|description=CAGE_peak_at_chr11:34644466..34644467,+
|association_with_transcript=NA
...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:34644466..34644467,+ | |||
|description=CAGE_peak_at_chr11:34644466..34644467,+ | |||
|id=chr11:34644466..34644467,+ | |||
|ontology_enrichment_celltype=CL:0000557!8.08e-10!71;CL:0000047!3.37e-09!8;CL:0000839!3.37e-08!70;CL:0000766!7.55e-08!76;CL:0002057!1.46e-07!42;CL:0002009!1.66e-07!65;CL:0000860!9.09e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0002588;7.07e-11;2!CL:0000453;1.88e-09;5!CL:0000097;1.88e-09;5!CL:0002166;1.58e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002588,5.53e-11,2;CL:0000453,1.53e-09,5;CL:0000097,1.77e-09,5;CL:0002028,1.77e-09,5;CL:0002166,9.99e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.35e-08!80;UBERON:0001017!4.82e-07!82;UBERON:0001474!6.65e-07!86;UBERON:0004765!8.87e-07!101;UBERON:0001434!8.87e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.52e-10,56;UBERON:0005068,2.52e-10,56;UBERON:0006241,2.52e-10,56;UBERON:0007135,2.52e-10,56;UBERON:0003075,2.60e-10,82;UBERON:0007284,2.60e-10,82;UBERON:0001016,3.00e-10,89;UBERON:0001017,3.34e-10,81;UBERON:0002346,1.09e-09,86;UBERON:0000073,3.49e-09,53;UBERON:0002616,3.49e-09,53;UBERON:0003056,1.14e-07,61;UBERON:0010371,1.71e-07,104;UBERON:0010314,3.85e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,2.01697543935533,3.01347264011988,3.65155045193687,0,0,0,0,0,0,0,0,0,0,0,0,0.77408061658038,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,0,0,0,0,0,0.709446689665756,0,1.29096936716765,0,0,0,0.224723484445085,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0.65156653411535,0,0.368277635987565,0.632924774881769,0.211255286311942,0.212604299965044,0,0.336985893439485,0.600707571366025,0.16072558669708,0,0.79566670879636,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.334372990781356,0,0,0,0.445641827540694,0.883817722424512,0.221533894583621,0,0.128091319725675,0,0,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926864265692532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0.337552664482532,0.0974370051611986,0,0,0.969876340912871,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,2.05881372358231,0,0,0,0,0,0,0,1.73895607462615,0.70445216541493,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,2.85569617938061,1.98485136139341,0,0,0,0,0.088048434013226,3.93923419527467,1.15295962733569,1.8936365013957,1.96843472305724,0,0,0,0,0.300343057843917,0,0,0,0.1466765716419,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,2.00902836572851,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.315404830067869,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2276957863045,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,1.57752487424457,2.84922218938051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,0,0,0.111443384277478,0,0.47748896947538,1.18785872333055,0,2.98244294329889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,5.4037825983881,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0,0,0,0,1.59045937961861,0,0.160753148465019,0.275078873194468,1.24632101408756,0.449947783103001,1.5476039091159,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80996138906171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0,7.45431954397093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,1.04349012362347,0,3.42724690951916,0,0,0,0,0,0,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32162100783408,1.79921933681429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,5.6678630530234,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56215619722769,0,0,0,0,0,0,0,1.60710550763486,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,2.1593931382644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,7.46252495512901,0,0,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,2.01697543935533,3.01347264011988,3.65155045193687,0,0,0,0,0,0,0,0,0,0,0,0,0.77408061658038,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,0,0,0,0,0,0.709446689665756,0,1.29096936716765,0,0,0,0.224723484445085,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0.65156653411535,0,0.368277635987565,0.632924774881769,0.211255286311942,0.212604299965044,0,0.336985893439485,0.600707571366025,0.16072558669708,0,0.79566670879636,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.334372990781356,0,0,0,0.445641827540694,0.883817722424512,0.221533894583621,0,0.128091319725675,0,0,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926864265692532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0.337552664482532,0.0974370051611986,0,0,0.969876340912871,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,2.05881372358231,0,0,0,0,0,0,0,1.73895607462615,0.70445216541493,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,2.85569617938061,1.98485136139341,0,0,0,0,0.088048434013226,3.93923419527467,1.15295962733569,1.8936365013957,1.96843472305724,0,0,0,0,0.300343057843917,0,0,0,0.1466765716419,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,2.00902836572851,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.315404830067869,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2276957863045,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,1.57752487424457,2.84922218938051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,0,0,0.111443384277478,0,0.47748896947538,1.18785872333055,0,2.98244294329889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,5.4037825983881,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0,0,0,0,1.59045937961861,0,0.160753148465019,0.275078873194468,1.24632101408756,0.449947783103001,1.5476039091159,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80996138906171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0,7.45431954397093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,1.04349012362347,0,3.42724690951916,0,0,0,0,0,0,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32162100783408,1.79921933681429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,5.6678630530234,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56215619722769,0,0,0,0,0,0,0,1.60710550763486,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,2.1593931382644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,7.46252495512901,0,0,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:34644466..34644467,+ | |||
}} | }} |
Latest revision as of 21:45, 23 July 2015
Short description: | p@chr11:34644466..34644467, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:34644466..34644467, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical vein | 5.53e-11 | 2 |
Langerhans cell | 1.53e-09 | 5 |
mast cell | 1.77e-09 | 5 |
basophil mast progenitor cell | 1.77e-09 | 5 |
epithelial cell of Malassez | 9.99e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
neural tube | 2.52e-10 | 56 |
neural rod | 2.52e-10 | 56 |
future spinal cord | 2.52e-10 | 56 |
neural keel | 2.52e-10 | 56 |
neural plate | 2.60e-10 | 82 |
presumptive neural plate | 2.60e-10 | 82 |
nervous system | 3.00e-10 | 89 |
central nervous system | 3.34e-10 | 81 |
neurectoderm | 1.09e-09 | 86 |
regional part of nervous system | 3.49e-09 | 53 |
regional part of brain | 3.49e-09 | 53 |
pre-chordal neural plate | 1.14e-07 | 61 |
ecto-epithelium | 1.71e-07 | 104 |
structure with developmental contribution from neural crest | 3.85e-07 | 132 |