FFCP PHASE1:Hg19::chr1:1567546..1567574,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8510 | |EntrezGene=8510 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7171 | |HGNC=7171 | ||
|TSSclassifier=strong | |||
|UniProt=O75086,C9J6U7,B4DMZ6,O75900 | |UniProt=O75086,C9J6U7,B4DMZ6,O75900 | ||
|association_with_transcript=0bp_to_ENST00000378675,ENST00000412415,ENST00000512731,NM_006983,uc001agp.2,uc001agq.2_5end | |association_with_transcript=0bp_to_ENST00000378675,ENST00000412415,ENST00000512731,NM_006983,uc001agp.2,uc001agq.2_5end | ||
|cluster_id=chr1:1567546..1567574,+ | |||
|coexpression_cluster_id=C2532 | |||
|description=CAGE_peak_1_at_MMP23B_5end | |description=CAGE_peak_1_at_MMP23B_5end | ||
|id=chr1:1567546..1567574,+ | |id=chr1:1567546..1567574,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.80e-09!115;UBERON:0000466!4.80e-08!126;UBERON:0003103!1.90e-07!69;UBERON:0003886!4.25e-07!63;UBERON:0004458!6.36e-07!49;UBERON:0000468!8.90e-07!659;UBERON:0003101!8.90e-07!22;UBERON:0000079!8.90e-07!22;UBERON:0002323!9.21e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0003101;8.14e-09;22!UBERON:0000079;8.14e-09;22!UBERON:0000160;3.11e-08;17!UBERON:0000922;7.33e-08;49!UBERON:0003688;2.31e-07;6!UBERON:0002358;2.31e-07;6!UBERON:0003684;2.31e-07;6!UBERON:0001178;2.31e-07;6!UBERON:0005409;8.63e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003101,5.63e-09,22;UBERON:0000079,5.63e-09,22;UBERON:0000160,2.82e-08,17;UBERON:0003104,6.14e-08,160;UBERON:0009142,6.14e-08,160;UBERON:0004921,1.11e-07,118;UBERON:0007023,1.86e-07,114;UBERON:0003688,2.99e-07,6;UBERON:0002358,2.99e-07,6;UBERON:0003684,2.99e-07,6;UBERON:0001178,2.99e-07,6;UBERON:0003886,5.18e-07,54;UBERON:0004119,6.61e-07,160;UBERON:0000925,6.61e-07,160;UBERON:0006595,6.61e-07,160;UBERON:0002100,7.97e-07,199;UBERON:0005156,8.08e-07,59;UBERON:0000990,8.08e-07,59;UBERON:0003064,8.60e-07,28;UBERON:0003135,9.35e-07,11 | |||
|phase1_expression=3.81524596468169,0,14.2363948136931,9.00659685178174,44.2491483483015,14.8297549097063,2.53299878168311,0,0,2.21160542851358,1.39560233594486,0.218441372130172,6.33040747748289,0.123766352960047,0.331397375727916,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0,0,0,0,1.15148819429164,1.23852898652861,0,0,0,0,0,0,0,0,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0.383220493601921,0,0,0.318565414324097,0,0.950452044448374,0.451725357233318,1.02389288923535,0,1.18388626022008,0,1.20964045934839,0.802320587350522,0.434473211648397,21.9426179682566,2.68280343881454,4.09160197899297,0,0,0.144846518960824,0,0.486634870302636,0.945348171640679,1.33037638477538,1.40535657109002,8.05521314310933,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0.132409180813219,4.30254931123221,1.06400514659507,0.560677600142307,0,0,4.04574346019696,0.538842688278752,0,1.51357427644931,2.30470369792,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,1.82032272387605,5.03032699271367,0,0,0,0,0,0.45071417671979,0.453728732640084,0,0,0.423863802319124,0,0.206105058476878,0,0,0,0,0,0.276149695926898,2.10139873864455,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,11.465528376182,5.16866096453793,8.8307396580834,9.64047811642945,11.3544382894033,4.74470566798579,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,29.2217548045294,139.658275816265,0,0,2.95394953340702,0,0,0.343135620597051,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.927443239800615,2.46558257895225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.1832028885193,5.47655822984453,7.06957627187728,0,0,0,0,0.102827492703324,0.600686115687835,0,0,0.43596006883328,0,2.19761916788222,0,0,0,0,0,0,0,41.7495741481791,158.445508774301,0,0,35.8945868229971,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,1.57624608161542,1.50939302401662,2.95188983443421,0.254094624222463,0,0,0,0,0,0,0,1.71768088406796,4.50153468953709,2.44138521329762,0,0,0,0,3.61135319673263,4.5481500811197,1.03473071292505,0,0,0.0868836144680828,10.3774613455252,2.40200396667599,0,0.647142602455851,1.06727557803444,3.03127571446259,3.32870879020994,1.20956117331872,23.5702417427838,3.6830873589135,4.2099014164961,15.1204196121727,1.02341449813341,43.430558708774,14.8418066444991,0.308419387605311,0.177561725313127,0,0.519254429183621,0.464841513839837,0,0,0,2.98517565227978,2.36718518408732,3.40923478894503,0.451199612907412,0,1.56869953835371,0,0,1.13733384070897,0,0,0,3.25135725052623,15.5523829895005,0,0,0.223874754722178,0,0,0,1.31205858279882,1.95227036798582,5.87333766392017,0,0,0,0,1.6068392984416,0.193341436584244,0.154048617114644,0,0.137836572484531,0.537101224341368,0.290033387828457,0.0852266274161009,3.11612124763581,0,0,0.127612712494584,0,0,1.5740617341532,0,0,0,0,0.18532421910392,0,0.744316738719335,4.42931194606216,3.0500831027812,12.283093982944,29.0998511863066,0,0,23.9230368585809,31.2972213899102,15.0799875002479,0,0,0,34.6219954753609,0,0,1.36499911407986,12.4436780119267,1.13008116620243,0,0,0,3.47265320560013,20.3327373134456,0,0.30982349809975,0,0.286822704408103,4.02821068153797,0,0,0,0.329294892959902,0,1.39973888097993,0,0,0,5.36619664427641,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,2.62054953003568,0,0.648473311192717,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,1.90460633053462,0,0,0,36.7666506496043,5.3453642549875,53.4459621652664,0,0.140669416410513,0.445234820091624,0,0,18.3308149190984,4.97311047956066,0,0,0,0,0,0,0,14.6978674399031,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.0854309116885,0.227884111694002,0,0.0897576444097721,0.325942115766024,12.1220440698129,0.915975934018623,0,0,0.156980256395025,0,0,0,0,0.189753732724185,0.158936578980379,0,0,0,0,7.96209544862804,3.36138745112689,3.66618086960175,0,0,0,0.134802265961354,44.1417706014334,0,0,0,0,4.73501283419269,22.9882360492461,0,2.90658266291045,0,0,0,0,0,0,0,0,1.21491816834592,0,0,27.2573602457567,0,0,0,0,4.26751672549045,0,9.0392296312213,0,0,0,0,1.04206466326994,28.8161542898126,0,0,0,0,0,0,0,0,0,0,2.88950589901519,0,0,0,0,0,29.6039345348589,21.3119194330866,10.7680953686522,4.5926170114768,5.57993862577542,12.274430159303,29.695094839133,0.720599767084807,0,0.315132729228895,0.329663433524666,0.337017719270924,0.0984274815147488,0,0,0,2.73280352390533,7.01451126645892,4.98528405635022,0,0,0.121499113316049,0,3.30983970656632,18.7787425523293,2.21760706690754,0,0.191915197319445,23.5849457703211,11.2555634962123,0,0,0.864221491201268,0,0,0,0.170388021785422,0,2.05173127149315,3.97520666736664,0.258565912723101,0,0,0,13.2416391583941,20.1221510527572,9.5274982729855,2.48083010905975,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,1.01444720027578,0,2.33713309847224,0,0,0,0,0.457680136793847,0.907385542579434,0.466311601748341,0,0.159296767163702,0.899606224327209,0.465788870628778,1.65882483136342,0.265841714557995,0,3.30566739793881,0.380805212168795,0,0,0.429642228169954,19.0253841550182,0.398095888698616,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1539347670307,0,0.33946505990805,0,0,0,1.27201740261367,0.23658523500376,0,1.05802783107205,2.7562092961788,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0.198916222116275,61.3716279329939,0,0.781514011233092,0,0,4.13997041407727,0,0,0,0.0634158101939068,0,1.09651553371436,2.97726707033577,0,0.255524855279191,0,0.336283722218824,0.606965604236632,1.36597314810779,10.4668796791914,0,0,0,0.0657727735628491,0,12.1242228062355,35.1649055970303,0,0.280272163313789,21.9158092922279,0,0,0.857718530119876,3.79232668158544,0,10.0837797935496,28.8616091302891,0,0,0,0,0.236664001461131,0.340853619036631,6.77419280305486,0,0,0,0,0,0,0.647428837187895,0,38.2738762341606,20.885572701543,0,0,0,0.11294608203896,0.329821550236287,0,2.54674721756217,18.3590030823324,0,12.7477127312031,0,0,0.297046400327086,7.6078030965012,0,0.939839179798536,2.38494185502236,0,0,0,0,11.6853822119443,1.37618785021362,0.143339583151451,2.99765968167051,0,0,13.225671012885,2.97596014533401,2.31087814315709,17.3050624849516,9.21014901296076,0,7.60191006068622,2.75369840303351,0.801652215796681,6.52453786697399,0,19.626682838524,4.55539021265503,0,0,2.13233981900981,22.6161209890553,0.322944549180031,1.30356900021302,0.784923038064294,1.20929600728513,9.09527350311987,0.217716747896961,9.24029912930259,2.1552656964668,2.51027718874367,20.2922817493068,0.162806537221949,0.640364075266293,3.8614456457388,0,77.4315109931399,22.6146671738303,25.2275630555758,3.99454064511308,8.85604691800515,0 | |phase1_expression=3.81524596468169,0,14.2363948136931,9.00659685178174,44.2491483483015,14.8297549097063,2.53299878168311,0,0,2.21160542851358,1.39560233594486,0.218441372130172,6.33040747748289,0.123766352960047,0.331397375727916,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0,0,0,0,1.15148819429164,1.23852898652861,0,0,0,0,0,0,0,0,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0.383220493601921,0,0,0.318565414324097,0,0.950452044448374,0.451725357233318,1.02389288923535,0,1.18388626022008,0,1.20964045934839,0.802320587350522,0.434473211648397,21.9426179682566,2.68280343881454,4.09160197899297,0,0,0.144846518960824,0,0.486634870302636,0.945348171640679,1.33037638477538,1.40535657109002,8.05521314310933,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0.132409180813219,4.30254931123221,1.06400514659507,0.560677600142307,0,0,4.04574346019696,0.538842688278752,0,1.51357427644931,2.30470369792,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,1.82032272387605,5.03032699271367,0,0,0,0,0,0.45071417671979,0.453728732640084,0,0,0.423863802319124,0,0.206105058476878,0,0,0,0,0,0.276149695926898,2.10139873864455,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,11.465528376182,5.16866096453793,8.8307396580834,9.64047811642945,11.3544382894033,4.74470566798579,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,29.2217548045294,139.658275816265,0,0,2.95394953340702,0,0,0.343135620597051,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.927443239800615,2.46558257895225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.1832028885193,5.47655822984453,7.06957627187728,0,0,0,0,0.102827492703324,0.600686115687835,0,0,0.43596006883328,0,2.19761916788222,0,0,0,0,0,0,0,41.7495741481791,158.445508774301,0,0,35.8945868229971,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,1.57624608161542,1.50939302401662,2.95188983443421,0.254094624222463,0,0,0,0,0,0,0,1.71768088406796,4.50153468953709,2.44138521329762,0,0,0,0,3.61135319673263,4.5481500811197,1.03473071292505,0,0,0.0868836144680828,10.3774613455252,2.40200396667599,0,0.647142602455851,1.06727557803444,3.03127571446259,3.32870879020994,1.20956117331872,23.5702417427838,3.6830873589135,4.2099014164961,15.1204196121727,1.02341449813341,43.430558708774,14.8418066444991,0.308419387605311,0.177561725313127,0,0.519254429183621,0.464841513839837,0,0,0,2.98517565227978,2.36718518408732,3.40923478894503,0.451199612907412,0,1.56869953835371,0,0,1.13733384070897,0,0,0,3.25135725052623,15.5523829895005,0,0,0.223874754722178,0,0,0,1.31205858279882,1.95227036798582,5.87333766392017,0,0,0,0,1.6068392984416,0.193341436584244,0.154048617114644,0,0.137836572484531,0.537101224341368,0.290033387828457,0.0852266274161009,3.11612124763581,0,0,0.127612712494584,0,0,1.5740617341532,0,0,0,0,0.18532421910392,0,0.744316738719335,4.42931194606216,3.0500831027812,12.283093982944,29.0998511863066,0,0,23.9230368585809,31.2972213899102,15.0799875002479,0,0,0,34.6219954753609,0,0,1.36499911407986,12.4436780119267,1.13008116620243,0,0,0,3.47265320560013,20.3327373134456,0,0.30982349809975,0,0.286822704408103,4.02821068153797,0,0,0,0.329294892959902,0,1.39973888097993,0,0,0,5.36619664427641,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,2.62054953003568,0,0.648473311192717,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,1.90460633053462,0,0,0,36.7666506496043,5.3453642549875,53.4459621652664,0,0.140669416410513,0.445234820091624,0,0,18.3308149190984,4.97311047956066,0,0,0,0,0,0,0,14.6978674399031,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.0854309116885,0.227884111694002,0,0.0897576444097721,0.325942115766024,12.1220440698129,0.915975934018623,0,0,0.156980256395025,0,0,0,0,0.189753732724185,0.158936578980379,0,0,0,0,7.96209544862804,3.36138745112689,3.66618086960175,0,0,0,0.134802265961354,44.1417706014334,0,0,0,0,4.73501283419269,22.9882360492461,0,2.90658266291045,0,0,0,0,0,0,0,0,1.21491816834592,0,0,27.2573602457567,0,0,0,0,4.26751672549045,0,9.0392296312213,0,0,0,0,1.04206466326994,28.8161542898126,0,0,0,0,0,0,0,0,0,0,2.88950589901519,0,0,0,0,0,29.6039345348589,21.3119194330866,10.7680953686522,4.5926170114768,5.57993862577542,12.274430159303,29.695094839133,0.720599767084807,0,0.315132729228895,0.329663433524666,0.337017719270924,0.0984274815147488,0,0,0,2.73280352390533,7.01451126645892,4.98528405635022,0,0,0.121499113316049,0,3.30983970656632,18.7787425523293,2.21760706690754,0,0.191915197319445,23.5849457703211,11.2555634962123,0,0,0.864221491201268,0,0,0,0.170388021785422,0,2.05173127149315,3.97520666736664,0.258565912723101,0,0,0,13.2416391583941,20.1221510527572,9.5274982729855,2.48083010905975,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,1.01444720027578,0,2.33713309847224,0,0,0,0,0.457680136793847,0.907385542579434,0.466311601748341,0,0.159296767163702,0.899606224327209,0.465788870628778,1.65882483136342,0.265841714557995,0,3.30566739793881,0.380805212168795,0,0,0.429642228169954,19.0253841550182,0.398095888698616,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1539347670307,0,0.33946505990805,0,0,0,1.27201740261367,0.23658523500376,0,1.05802783107205,2.7562092961788,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0.198916222116275,61.3716279329939,0,0.781514011233092,0,0,4.13997041407727,0,0,0,0.0634158101939068,0,1.09651553371436,2.97726707033577,0,0.255524855279191,0,0.336283722218824,0.606965604236632,1.36597314810779,10.4668796791914,0,0,0,0.0657727735628491,0,12.1242228062355,35.1649055970303,0,0.280272163313789,21.9158092922279,0,0,0.857718530119876,3.79232668158544,0,10.0837797935496,28.8616091302891,0,0,0,0,0.236664001461131,0.340853619036631,6.77419280305486,0,0,0,0,0,0,0.647428837187895,0,38.2738762341606,20.885572701543,0,0,0,0.11294608203896,0.329821550236287,0,2.54674721756217,18.3590030823324,0,12.7477127312031,0,0,0.297046400327086,7.6078030965012,0,0.939839179798536,2.38494185502236,0,0,0,0,11.6853822119443,1.37618785021362,0.143339583151451,2.99765968167051,0,0,13.225671012885,2.97596014533401,2.31087814315709,17.3050624849516,9.21014901296076,0,7.60191006068622,2.75369840303351,0.801652215796681,6.52453786697399,0,19.626682838524,4.55539021265503,0,0,2.13233981900981,22.6161209890553,0.322944549180031,1.30356900021302,0.784923038064294,1.20929600728513,9.09527350311987,0.217716747896961,9.24029912930259,2.1552656964668,2.51027718874367,20.2922817493068,0.162806537221949,0.640364075266293,3.8614456457388,0,77.4315109931399,22.6146671738303,25.2275630555758,3.99454064511308,8.85604691800515,0 | ||
|short_description=p1@MMP23B | |short_description=p1@MMP23B | ||
}} | }} |
Latest revision as of 18:09, 17 September 2015
Short description: | p1@MMP23B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MMP23B_5end |
Coexpression cluster: | C2532_Mesenchymal_Hepatic_umbilical_ovary_amniotic_diaphragm_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000378675, ENST00000412415, ENST00000512731, NM_006983, uc001agp.2, uc001agq.2_5end |
EntrezGene: | MMP23B |
HGNC: | 7171 |
UniProt: | O75086C9J6U7B4DMZ6O75900 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male organism | 5.63e-09 | 22 |
male reproductive system | 5.63e-09 | 22 |
intestine | 2.82e-08 | 17 |
mesenchyme | 6.14e-08 | 160 |
entire embryonic mesenchyme | 6.14e-08 | 160 |
subdivision of digestive tract | 1.11e-07 | 118 |
adult organism | 1.86e-07 | 114 |
omentum | 2.99e-07 | 6 |
peritoneum | 2.99e-07 | 6 |
abdominal cavity | 2.99e-07 | 6 |
visceral peritoneum | 2.99e-07 | 6 |
body cavity precursor | 5.18e-07 | 54 |
endoderm-derived structure | 6.61e-07 | 160 |
endoderm | 6.61e-07 | 160 |
presumptive endoderm | 6.61e-07 | 160 |
trunk | 7.97e-07 | 199 |
reproductive structure | 8.08e-07 | 59 |
reproductive system | 8.08e-07 | 59 |
intermediate mesoderm | 8.60e-07 | 28 |
male reproductive organ | 9.35e-07 | 11 |