FFCP PHASE1:Hg19::chr15:63349171..63349210,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7168 | |EntrezGene=7168 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12010 | |HGNC=12010 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000561395_5end | |association_with_transcript=0bp_to_ENST00000561395_5end | ||
|cluster_id=chr15:63349171..63349210,+ | |||
|coexpression_cluster_id=C1041 | |||
|description=CAGE_peak_9_at_TPM1_5end | |description=CAGE_peak_9_at_TPM1_5end | ||
|id=chr15:63349171..63349210,+ | |id=chr15:63349171..63349210,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.47e-15!180;CL:0000192!2.21e-09!42;CL:0000514!2.21e-09!42;CL:0000359!3.14e-09!32;CL:0000680!6.91e-08!57;CL:0000056!6.91e-08!57;CL:0000355!6.91e-08!57;CL:0000393!1.14e-07!60;CL:0000211!1.14e-07!60;CL:0000187!1.53e-07!54;CL:0000183!2.64e-07!59;CL:0000057!3.77e-07!75 | |ontology_enrichment_celltype=CL:0000055!9.47e-15!180;CL:0000192!2.21e-09!42;CL:0000514!2.21e-09!42;CL:0000359!3.14e-09!32;CL:0000680!6.91e-08!57;CL:0000056!6.91e-08!57;CL:0000355!6.91e-08!57;CL:0000393!1.14e-07!60;CL:0000211!1.14e-07!60;CL:0000187!1.53e-07!54;CL:0000183!2.64e-07!59;CL:0000057!3.77e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.13e-10;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.60e-11,32;CL:0000192,1.01e-08,43;CL:0000514,1.01e-08,43;CL:0000057,7.89e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!2.01e-10!63;UBERON:0001015!2.01e-10!63;UBERON:0000383!2.01e-10!63;UBERON:0000468!1.11e-09!659;UBERON:0001134!1.13e-09!61;UBERON:0002036!1.13e-09!61;UBERON:0003082!1.13e-09!61;UBERON:0005256!4.68e-09!143;UBERON:0000481!1.40e-08!347;UBERON:0000475!1.85e-08!365;UBERON:0000914!2.08e-08!83;UBERON:0002329!2.08e-08!83;UBERON:0003077!2.08e-08!83;UBERON:0003059!2.08e-08!83;UBERON:0007282!2.08e-08!83;UBERON:0009618!2.08e-08!83;UBERON:0007285!2.08e-08!83;UBERON:0004872!6.10e-08!84;UBERON:0002100!1.04e-07!216;UBERON:0001637!1.36e-07!42;UBERON:0003509!1.36e-07!42;UBERON:0004572!1.36e-07!42;UBERON:0004290!1.61e-07!70;UBERON:0007100!2.30e-07!27;UBERON:0000486!2.88e-07!82;UBERON:0003103!4.26e-07!69;UBERON:0004573!5.16e-07!33;UBERON:0004571!5.16e-07!33;UBERON:0003914!5.23e-07!118;UBERON:0000467!5.40e-07!625;UBERON:0000480!7.98e-07!626 | |ontology_enrichment_uberon=UBERON:0002385!2.01e-10!63;UBERON:0001015!2.01e-10!63;UBERON:0000383!2.01e-10!63;UBERON:0000468!1.11e-09!659;UBERON:0001134!1.13e-09!61;UBERON:0002036!1.13e-09!61;UBERON:0003082!1.13e-09!61;UBERON:0005256!4.68e-09!143;UBERON:0000481!1.40e-08!347;UBERON:0000475!1.85e-08!365;UBERON:0000914!2.08e-08!83;UBERON:0002329!2.08e-08!83;UBERON:0003077!2.08e-08!83;UBERON:0003059!2.08e-08!83;UBERON:0007282!2.08e-08!83;UBERON:0009618!2.08e-08!83;UBERON:0007285!2.08e-08!83;UBERON:0004872!6.10e-08!84;UBERON:0002100!1.04e-07!216;UBERON:0001637!1.36e-07!42;UBERON:0003509!1.36e-07!42;UBERON:0004572!1.36e-07!42;UBERON:0004290!1.61e-07!70;UBERON:0007100!2.30e-07!27;UBERON:0000486!2.88e-07!82;UBERON:0003103!4.26e-07!69;UBERON:0004573!5.16e-07!33;UBERON:0004571!5.16e-07!33;UBERON:0003914!5.23e-07!118;UBERON:0000467!5.40e-07!625;UBERON:0000480!7.98e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.25e-07;25!UBERON:0004573;2.38e-07;33!UBERON:0004571;2.38e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,8.58e-09,42;UBERON:0003509,8.58e-09,42;UBERON:0004572,8.58e-09,42;UBERON:0004573,1.52e-08,33;UBERON:0004571,1.52e-08,33;UBERON:0002385,1.71e-08,64;UBERON:0001015,1.71e-08,64;UBERON:0000383,1.71e-08,64;UBERON:0001134,1.17e-07,62;UBERON:0002036,1.17e-07,62;UBERON:0003082,1.17e-07,62;UBERON:0007100,2.83e-07,27;UBERON:0004872,3.84e-07,83 | |||
|phase1_expression=2.90685406832891,5.78071414505655,3.66481450649525,7.00513088471913,6.25745532198203,7.85104671690332,0,0.631719873426831,0,0.491467873003018,0,1.96597234917155,1.58260186937072,0.37129905888014,0.994192127183747,7.39557661096953,4.21886169616784,6.57279081348636,3.41552959153355,0,1.63200552995402,0.313454721478088,2.57612388417951,0.958120975510189,2.38531015230125,0,0,0.0787107813136792,0,0,0.464448369948228,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,4.87613732627923,0,0.511450247374121,2.1686349143074,1.00267582127178,2.462390822334,0.795285947051099,1.45990461090791,2.07976597760949,3.99112915432615,3.33772185633879,0.589405839739707,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0,0.419499436209906,0.275118041940067,0.417989933073621,0,0,0.33472061276467,0,0,0.488124115096339,0,4.0507097394088,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0.366403487860815,0,0,0.436094052142534,10.933382937297,1.64619665163954,1.32409180813219,0.573673241497627,1.77334191099179,5.60677600142307,6.4049397437823,4.68668341992604,0,1.0776853765575,0.817309515567294,0.908144565869588,1.72852777344,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0.702254033511242,0,0.491337269247072,0.103325781175765,1.18800285728205,2.47266929278557,0,1.43723628363248,0,0.125118519871964,0.277064115484183,2.19488810440419,7.35570709917647,1.35214253015937,1.24775401476023,3.22901344239952,2.13557388818567,3.39091041855299,1.20036438433761,1.54578793857658,1.8034837803194,2.23340227597908,1.5189869901714,5.16416127354353,3.02920529092937,1.47279837827679,0.646584227275248,4.61512470271599,4.53384442024381,2.20428770003634,0.386521706326594,0.545492241181669,0.573609190778008,1.58565817968474,0.662648841607426,1.62671520017326,0.518305275076852,1.51392510525377,0.36497735907583,0,0,1.38134921352481,0.928735856063958,0,1.53798840051797,0.842923450390509,1.20505514941741,0.661763836394364,1.08939722046203,1.18635309555548,0.808987848960987,0.98110732562673,0,0,0,0,4.41026134156626,1.26755034821831,0,0.590789906681404,0,0.122988438543114,1.20097467208968,0.658501712451753,0,0.402115889646523,0.185176890317059,0,0,4.3299402607582,0.463721619900307,2.34817388471643,0.288732895522148,0.462985512576611,1.33177906564219,0,0,0.246217006087397,0,0,1.87467667973554,2.01578553838631,0.283550194484773,0.268675568108545,0.290633938513962,0,0.492663237895943,0,0,0.144119953416961,0,0,0,0,1.71072446022705,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0.5867062865676,2.84397774667111,0,1.690605505112,4.25500986535793,6.24044621468197,0,0,0,0.857867961948885,0,0,0,1.42156779497018,0,1.20575750823834,1.74306691720059,6.79816340037988,0,0,4.21667878966063,4.31324739884849,5.7430967917057,0,0.723906533337896,1.84928690295345,0.895304816199478,0,0,0,0,0,0,1.54657762555539,0.335032530668698,0,0,0,0,0.12269149171914,1.00034104211935,0.542530047399471,7.27898015357825,10.8841683166269,4.25796520591624,4.09994952474496,0.601892199455438,0,2.0694614258501,1.99267679560631,1.84369168541703,0.347534457872331,0,1.02943027143257,0,0,0,0,1.66435439510497,0.907170879989041,3.2254015016441,2.91577749247319,9.5424432107245,2.17836553734692,5.11707249066703,10.1337970320473,5.93672265779964,2.62156479464514,1.77561725313127,0.328508624055237,1.55776328755086,1.51073491997947,0.241718899183244,1.60405176242628,0.276242966807689,0.803701137152247,3.64182336013434,2.62248829918848,0.451199612907412,1.69433741629712,1.56869953835371,0,2.53323909342902,1.13733384070897,0.170093705276516,3.88648648983851,0,1.08378575017541,1.50506932156456,0,0.831076008928724,2.0148727924996,0.438519753291869,0.261435451024901,0,2.62411716559765,0.650756789328606,0.515205058238611,0.824125183365091,0.247528499761764,0,0.650060246036521,4.82051789532479,0.096670718292122,0.462145851343933,0.614014698904518,0.551346289938122,0.107420244868274,0.145016693914229,0.170453254832202,1.06838442776085,0.495854746082934,2.11409074101617,0.127612712494584,0.4046311234222,2.32422774648643,2.20368642781448,0,3.08033580176089,2.66153015158511,0.869932992075073,1.8532421910392,11.8793655995853,1.116475108079,1.2655176988749,1.90630193923825,0,0.42793898803392,0,10.20433232259,0.899362287916574,1.92175920815238,1.41374882814824,2.22400729730648,9.5106192703805,2.94880919367287,0.48763373908959,2.19342140668156,2.11300293513511,0.818999468447914,2.12108147930569,0,2.2054613741845,7.29782872765342,7.45366504931397,0.578775534266688,1.9676842561399,2.23201414658974,4.3375289733965,3.94373843545138,0.860468113224309,0.88424136911809,2.85336841185,0.709522128141196,1.26664581178598,1.64647446479951,0,0,0.0962221127255121,1.34060455107157,0,0,0,3.36942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|phase1_expression=2.90685406832891,5.78071414505655,3.66481450649525,7.00513088471913,6.25745532198203,7.85104671690332,0,0.631719873426831,0,0.491467873003018,0,1.96597234917155,1.58260186937072,0.37129905888014,0.994192127183747,7.39557661096953,4.21886169616784,6.57279081348636,3.41552959153355,0,1.63200552995402,0.313454721478088,2.57612388417951,0.958120975510189,2.38531015230125,0,0,0.0787107813136792,0,0,0.464448369948228,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,4.87613732627923,0,0.511450247374121,2.1686349143074,1.00267582127178,2.462390822334,0.795285947051099,1.45990461090791,2.07976597760949,3.99112915432615,3.33772185633879,0.589405839739707,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0,0.419499436209906,0.275118041940067,0.417989933073621,0,0,0.33472061276467,0,0,0.488124115096339,0,4.0507097394088,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0.366403487860815,0,0,0.436094052142534,10.933382937297,1.64619665163954,1.32409180813219,0.573673241497627,1.77334191099179,5.60677600142307,6.4049397437823,4.68668341992604,0,1.0776853765575,0.817309515567294,0.908144565869588,1.72852777344,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0.702254033511242,0,0.491337269247072,0.103325781175765,1.18800285728205,2.47266929278557,0,1.43723628363248,0,0.125118519871964,0.277064115484183,2.19488810440419,7.35570709917647,1.35214253015937,1.24775401476023,3.22901344239952,2.13557388818567,3.39091041855299,1.20036438433761,1.54578793857658,1.8034837803194,2.23340227597908,1.5189869901714,5.16416127354353,3.02920529092937,1.47279837827679,0.646584227275248,4.61512470271599,4.53384442024381,2.20428770003634,0.386521706326594,0.545492241181669,0.573609190778008,1.58565817968474,0.662648841607426,1.62671520017326,0.518305275076852,1.51392510525377,0.36497735907583,0,0,1.38134921352481,0.928735856063958,0,1.53798840051797,0.842923450390509,1.20505514941741,0.661763836394364,1.08939722046203,1.18635309555548,0.808987848960987,0.98110732562673,0,0,0,0,4.41026134156626,1.26755034821831,0,0.590789906681404,0,0.122988438543114,1.20097467208968,0.658501712451753,0,0.402115889646523,0.185176890317059,0,0,4.3299402607582,0.463721619900307,2.34817388471643,0.288732895522148,0.462985512576611,1.33177906564219,0,0,0.246217006087397,0,0,1.87467667973554,2.01578553838631,0.283550194484773,0.268675568108545,0.290633938513962,0,0.492663237895943,0,0,0.144119953416961,0,0,0,0,1.71072446022705,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0.5867062865676,2.84397774667111,0,1.690605505112,4.25500986535793,6.24044621468197,0,0,0,0.857867961948885,0,0,0,1.42156779497018,0,1.20575750823834,1.74306691720059,6.79816340037988,0,0,4.21667878966063,4.31324739884849,5.7430967917057,0,0.723906533337896,1.84928690295345,0.895304816199478,0,0,0,0,0,0,1.54657762555539,0.335032530668698,0,0,0,0,0.12269149171914,1.00034104211935,0.542530047399471,7.27898015357825,10.8841683166269,4.25796520591624,4.09994952474496,0.601892199455438,0,2.0694614258501,1.99267679560631,1.84369168541703,0.347534457872331,0,1.02943027143257,0,0,0,0,1.66435439510497,0.907170879989041,3.2254015016441,2.91577749247319,9.5424432107245,2.17836553734692,5.11707249066703,10.1337970320473,5.93672265779964,2.62156479464514,1.77561725313127,0.328508624055237,1.55776328755086,1.51073491997947,0.241718899183244,1.60405176242628,0.276242966807689,0.803701137152247,3.64182336013434,2.62248829918848,0.451199612907412,1.69433741629712,1.56869953835371,0,2.53323909342902,1.13733384070897,0.170093705276516,3.88648648983851,0,1.08378575017541,1.50506932156456,0,0.831076008928724,2.0148727924996,0.438519753291869,0.261435451024901,0,2.62411716559765,0.650756789328606,0.515205058238611,0.824125183365091,0.247528499761764,0,0.650060246036521,4.82051789532479,0.096670718292122,0.462145851343933,0.614014698904518,0.551346289938122,0.107420244868274,0.145016693914229,0.170453254832202,1.06838442776085,0.495854746082934,2.11409074101617,0.127612712494584,0.4046311234222,2.32422774648643,2.20368642781448,0,3.08033580176089,2.66153015158511,0.869932992075073,1.8532421910392,11.8793655995853,1.116475108079,1.2655176988749,1.90630193923825,0,0.42793898803392,0,10.20433232259,0.899362287916574,1.92175920815238,1.41374882814824,2.22400729730648,9.5106192703805,2.94880919367287,0.48763373908959,2.19342140668156,2.11300293513511,0.818999468447914,2.12108147930569,0,2.2054613741845,7.29782872765342,7.45366504931397,0.578775534266688,1.9676842561399,2.23201414658974,4.3375289733965,3.94373843545138,0.860468113224309,0.88424136911809,2.85336841185,0.709522128141196,1.26664581178598,1.64647446479951,0,0,0.0962221127255121,1.34060455107157,0,0,0,3.36942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| ||
|short_description=p9@TPM1 | |short_description=p9@TPM1 | ||
}} | }} |
Latest revision as of 11:38, 18 September 2015
Short description: | p9@TPM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TPM1_5end |
Coexpression cluster: | C1041_heart_hepatic_left_mesodermal_smooth_spindle_skeletal |
Association with transcript: | 0bp_to_ENST00000561395_5end |
EntrezGene: | TPM1 |
HGNC: | 12010 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.60e-11 | 32 |
smooth muscle cell | 1.01e-08 | 43 |
smooth muscle myoblast | 1.01e-08 | 43 |
fibroblast | 7.89e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
artery | 8.58e-09 | 42 |
arterial blood vessel | 8.58e-09 | 42 |
arterial system | 8.58e-09 | 42 |
systemic artery | 1.52e-08 | 33 |
systemic arterial system | 1.52e-08 | 33 |
muscle tissue | 1.71e-08 | 64 |
musculature | 1.71e-08 | 64 |
musculature of body | 1.71e-08 | 64 |
skeletal muscle tissue | 1.17e-07 | 62 |
striated muscle tissue | 1.17e-07 | 62 |
myotome | 1.17e-07 | 62 |
primary circulatory organ | 2.83e-07 | 27 |
splanchnic layer of lateral plate mesoderm | 3.84e-07 | 83 |