FFCP PHASE1:Hg19::chr1:201617252..201617262,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89796 | |EntrezGene=89796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15989 | |HGNC=15989 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NEY1 | |UniProt=Q8NEY1 | ||
|association_with_transcript=-114bp_to_ENST00000367296_5end | |association_with_transcript=-114bp_to_ENST00000367296_5end | ||
|cluster_id=chr1:201617252..201617262,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_28_at_NAV1_5end | |description=CAGE_peak_28_at_NAV1_5end | ||
|id=chr1:201617252..201617262,+ | |id=chr1:201617252..201617262,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.57e-07!180 | |ontology_enrichment_celltype=CL:0000055!5.57e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000138;7.32e-08;6!CL:0000327;8.63e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.58e-08,6;CL:0000138,7.58e-08,6;CL:0000327,8.46e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.57e-16!82;UBERON:0000073!2.04e-16!94;UBERON:0001016!2.04e-16!94;UBERON:0005743!8.53e-16!86;UBERON:0000955!6.50e-14!69;UBERON:0006238!6.50e-14!69;UBERON:0001049!5.93e-13!57;UBERON:0005068!5.93e-13!57;UBERON:0006241!5.93e-13!57;UBERON:0007135!5.93e-13!57;UBERON:0000956!6.41e-13!25;UBERON:0000203!6.41e-13!25;UBERON:0001893!1.11e-12!34;UBERON:0002619!1.50e-12!22;UBERON:0001869!1.59e-12!32;UBERON:0002346!2.03e-12!90;UBERON:0002020!4.86e-12!34;UBERON:0003528!4.86e-12!34;UBERON:0002791!7.42e-12!33;UBERON:0002780!2.54e-11!41;UBERON:0001890!2.54e-11!41;UBERON:0006240!2.54e-11!41;UBERON:0002616!3.04e-11!59;UBERON:0003075!3.89e-11!86;UBERON:0007284!3.89e-11!86;UBERON:0003080!7.24e-11!42;UBERON:0000924!9.31e-11!173;UBERON:0006601!9.31e-11!173;UBERON:0001950!1.47e-10!20;UBERON:0000033!3.71e-10!123;UBERON:0000153!4.97e-10!129;UBERON:0007811!4.97e-10!129;UBERON:0000475!9.57e-10!365;UBERON:0004121!9.93e-10!169;UBERON:0003056!1.02e-08!61;UBERON:0000119!1.62e-08!312;UBERON:0007023!9.76e-08!115;UBERON:0000483!1.25e-07!309;UBERON:0000468!4.10e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.43e-16;22!UBERON:0000956;2.78e-14;25!UBERON:0000203;2.78e-14;25!UBERON:0001950;1.69e-12;20!UBERON:0002022;9.60e-12;1!UBERON:0002791;5.94e-10;32!UBERON:0001869;8.24e-10;32!UBERON:0003528;1.87e-09;34!UBERON:0002020;1.87e-09;34!UBERON:0001893;1.41e-08;34!UBERON:0001871;7.41e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.08e-16,22;UBERON:0000956,2.53e-14,25;UBERON:0000203,2.53e-14,25;UBERON:0001950,1.57e-12,20;UBERON:0002022,9.61e-12,1;UBERON:0002791,3.34e-11,32;UBERON:0001869,3.34e-11,32;UBERON:0003528,1.54e-10,34;UBERON:0002020,1.54e-10,34;UBERON:0001893,1.54e-10,34;UBERON:0001016,4.67e-10,89;UBERON:0001017,3.89e-09,81;UBERON:0002780,1.03e-08,41;UBERON:0001890,1.03e-08,41;UBERON:0003080,1.03e-08,41;UBERON:0006240,1.03e-08,41;UBERON:0001871,6.58e-07,6;UBERON:0000955,8.95e-07,68;UBERON:0006238,8.95e-07,68 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0.273748850145768,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,1.50401373190767,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0.397227542439656,0.573673241497627,0,0,0,0.49333509683432,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0,0,0.408308342509787,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0,0.211931901159562,0,0,0.257640540045629,0,0.337552664482532,0.194874010322397,0,0,0.161646056818812,0.355009592516614,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.469634776943287,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.44024217006613,0.414656231081544,0.432359860250884,0.37872730027914,0,0,0,0,0,0,0,0.336393253036082,1.30788020649984,0.07333828582095,0,0,0,0,0,0.257207374262142,1.41849132023278,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0.76228387266739,1.30139853857622,0,1.00509759200609,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0,0,0,0,0,0,0,0.260650843404249,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0.306923946576125,0,0.512556597022804,0.511707249066704,0.160853921143607,0,0,0.355123450626254,0.328508624055237,0.519254429183621,0,0,0,0,0,0.182091168006717,0.524497659837696,0,0,0,0,0,1.13733384070897,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.386682873168488,0,0,0.137836572484531,0.214840489736547,0,0.255679882248303,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0.571890581771475,0,0.42793898803392,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0.404364963146632,0,0.421258456238981,0,0.487426979262569,0,0,0.565621727814851,0,0,0,0,0,0,0,0.30982349809975,0.845086807596724,0,0.0982490410131212,0,0,0,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0.276283915531148,0.503865495708552,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,3.99227596002388,0,0,0,0,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503464760927528,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.404406797884062,0,0,0,0,0,0,0,1.53036380815245,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0.19871461170299,0.949661939338181,0,0,0.213452994739353,0,0,0,0.343189995723929,0,0,0,0.135904206073614,0.104602846312333,0,0.577901179803038,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.399358000997982,0,0.223171457441873,0.335917362433631,0.360299883542404,0,0,0,0,0,0,2.38568906942791,0.681017030557878,0,0,0,0,0,1.27574068981852,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22026264901963,0.3755727921195,0,0,0.0620964029413835,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0.554805861502613,0.189403005275089,0.251567901752575,0,0,0,0,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0.214821114084977,0.928067519756987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0.265729680626726,0.163565394255844,0,0,0,0,0,0,1.13503190713367,0,0,0,0.255788742607303,1.1860729253635,0,0.109209638192014,0.33946505990805,2.33832412111851,0.123935764259002,0.558644917973244,0,0,0,0,0.6124909547064,0.449604575675217,0,0.638535436228605,0.41023272848151,2.26864526599546,0.414943514785307,0.807378228159255,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0.540300676947157,0,0,0.507326481551255,5.4697480901822,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.40781839786099,0.197318320688547,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0.316027223465453,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0.118920090777569,0,0,0.301925687133347,0.0771741581079447,0,0,0.245148321753905,0,0.392616934229891,0.297046400327086,0.4226557275834,0.339854229375634,0,0,0,0,0,0,0,0,0,0.157771562193185,0.747906392100062,4.36350690340377,0,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0.227336094654718,0.267964130156178,0.829169439458779,0.103432995861895,0,0.23806443146374,0,0.0620747142958579,0.112131862580613,0,0.202117188958219,0,0,0.0673520530145875,0,0,0,0,1.93072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| ||
|short_description=p28@NAV1 | |short_description=p28@NAV1 | ||
}} | }} |
Latest revision as of 18:26, 19 September 2015
Short description: | p28@NAV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_NAV1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -114bp_to_ENST00000367296_5end |
EntrezGene: | NAV1 |
HGNC: | 15989 |
UniProt: | Q8NEY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.58e-08 | 6 |
chondrocyte | 7.58e-08 | 6 |
extracellular matrix secreting cell | 8.46e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 3.08e-16 | 22 |
cerebral cortex | 2.53e-14 | 25 |
pallium | 2.53e-14 | 25 |
neocortex | 1.57e-12 | 20 |
insula | 9.61e-12 | 1 |
regional part of telencephalon | 3.34e-11 | 32 |
cerebral hemisphere | 3.34e-11 | 32 |
brain grey matter | 1.54e-10 | 34 |
gray matter | 1.54e-10 | 34 |
telencephalon | 1.54e-10 | 34 |
nervous system | 4.67e-10 | 89 |
central nervous system | 3.89e-09 | 81 |
regional part of forebrain | 1.03e-08 | 41 |
forebrain | 1.03e-08 | 41 |
anterior neural tube | 1.03e-08 | 41 |
future forebrain | 1.03e-08 | 41 |
temporal lobe | 6.58e-07 | 6 |
brain | 8.95e-07 | 68 |
future brain | 8.95e-07 | 68 |