FFCP PHASE1:Hg19::chr16:15870001..15870016,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:15870001..15870016,- | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_at_chr16:15870001..15870016,- | |description=CAGE_peak_at_chr16:15870001..15870016,- | ||
|id=chr16:15870001..15870016,- | |id=chr16:15870001..15870016,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.37e-22;2!UBERON:0005754;3.10e-12;1!UBERON:0000358;6.61e-12;1!UBERON:0009143;6.61e-12;1!UBERON:0004874;6.61e-12;1!UBERON:0006242;1.25e-11;1!UBERON:0006603;9.59e-07;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.62e-35!115;UBERON:0006947!2.64e-14!3;UBERON:0004054!2.64e-14!3;UBERON:0003135!7.03e-14!11;UBERON:0005904!7.73e-11!4;UBERON:0000059!8.24e-10!11;UBERON:0003101!7.48e-09!22;UBERON:0000079!7.48e-09!22;UBERON:0000160!1.14e-08!27;UBERON:0005409!4.51e-08!35;UBERON:0001155!5.83e-08!9;UBERON:0003133!4.00e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.28e-32;3!UBERON:0004054;2.28e-32;3!UBERON:0005904;1.85e-24;4!UBERON:0003135;1.15e-15;11!UBERON:0000998;3.10e-12;1!UBERON:0006868;3.10e-12;1!UBERON:0001000;4.29e-12;1!UBERON:0005352;4.29e-12;1!UBERON:0000989;6.61e-12;1!UBERON:0008811;6.61e-12;1!UBERON:0003101;6.85e-12;22!UBERON:0000079;6.85e-12;22!UBERON:0005795;1.25e-11;1!UBERON:0000996;1.25e-11;1!UBERON:0001301;1.25e-11;1!UBERON:0000058;3.81e-10;10!UBERON:0000160;1.16e-09;17!UBERON:0000059;3.48e-09;11!UBERON:0004175;2.96e-08;21!UBERON:0005409;1.35e-07;22!UBERON:0004921;2.79e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.98e-32,3;UBERON:0004054,2.98e-32,3;UBERON:0005904,2.26e-24,4;UBERON:0003135,1.24e-15,11;UBERON:0003064,4.49e-13,28;UBERON:0000998,3.27e-12,1;UBERON:0006868,3.27e-12,1;UBERON:0001000,4.06e-12,1;UBERON:0005352,4.06e-12,1;UBERON:0000989,6.26e-12,1;UBERON:0008811,6.26e-12,1;UBERON:0006258,6.26e-12,1;UBERON:0005876,6.26e-12,1;UBERON:0004874,6.26e-12,1;UBERON:0003101,7.78e-12,22;UBERON:0000079,7.78e-12,22;UBERON:0000996,1.07e-11,1;UBERON:0007023,1.54e-11,114;UBERON:0001301,1.63e-11,1;UBERON:0000160,1.06e-09,17;UBERON:0000059,3.15e-09,11;UBERON:0004876,3.43e-09,11;UBERON:0001046,5.28e-09,19;UBERON:0000162,2.92e-07,14;UBERON:0001353,2.92e-07,14;UBERON:0000163,2.92e-07,14;UBERON:0006866,2.92e-07,14;UBERON:0000164,2.92e-07,14;UBERON:0000931,2.92e-07,14;UBERON:0004175,5.96e-07,25;UBERON:0004122,8.29e-07,15;UBERON:0005409,9.21e-07,25 | |||
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| ||
|short_description=p@chr16:15870001..15870016,- | |short_description=p@chr16:15870001..15870016,- | ||
}} | }} |
Latest revision as of 06:38, 25 July 2015
Short description: | p@chr16:15870001..15870016, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:15870001..15870016, - |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.98e-32 | 3 |
internal male genitalia | 2.98e-32 | 3 |
duct of male reproductive system | 2.26e-24 | 4 |
male reproductive organ | 1.24e-15 | 11 |
intermediate mesoderm | 4.49e-13 | 28 |
seminal vesicle | 3.27e-12 | 1 |
seminal fluid secreting gland | 3.27e-12 | 1 |
vas deferens | 4.06e-12 | 1 |
spermatic cord | 4.06e-12 | 1 |
penis | 6.26e-12 | 1 |
intromittent organ | 6.26e-12 | 1 |
lateral plate mesenchyme | 6.26e-12 | 1 |
undifferentiated genital tubercle | 6.26e-12 | 1 |
somatopleure | 6.26e-12 | 1 |
male organism | 7.78e-12 | 22 |
male reproductive system | 7.78e-12 | 22 |
vagina | 1.07e-11 | 1 |
adult organism | 1.54e-11 | 114 |
epididymis | 1.63e-11 | 1 |
intestine | 1.06e-09 | 17 |
large intestine | 3.15e-09 | 11 |
urogenital ridge | 3.43e-09 | 11 |
hindgut | 5.28e-09 | 19 |
cloaca | 2.92e-07 | 14 |
anal region | 2.92e-07 | 14 |
embryonic cloaca | 2.92e-07 | 14 |
terminal part of digestive tract | 2.92e-07 | 14 |
primitive urogenital sinus | 2.92e-07 | 14 |
proctodeum | 2.92e-07 | 14 |
internal genitalia | 5.96e-07 | 25 |
genitourinary system | 8.29e-07 | 15 |
gastrointestinal system | 9.21e-07 | 25 |