FFCP PHASE1:Hg19::chr1:38022513..38022571,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7802 | |EntrezGene=7802 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14353 | |HGNC=14353 | ||
|TSSclassifier=strong | |||
|UniProt=O14645 | |UniProt=O14645 | ||
|association_with_transcript=0bp_to_ENST00000296218,ENST00000467181,ENST00000490312,NM_003462,uc001cbj.2,uc010oie.1_5end | |association_with_transcript=0bp_to_ENST00000296218,ENST00000467181,ENST00000490312,NM_003462,uc001cbj.2,uc010oie.1_5end | ||
|cluster_id=chr1:38022513..38022571,+ | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_1_at_DNALI1_5end | |description=CAGE_peak_1_at_DNALI1_5end | ||
|id=chr1:38022513..38022571,+ | |id=chr1:38022513..38022571,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.87e-12!180;CL:0000183!7.92e-09!59;CL:0000393!7.93e-09!60;CL:0000211!7.93e-09!60;CL:0000680!1.54e-07!57;CL:0000056!1.54e-07!57;CL:0000355!1.54e-07!57;CL:0000187!2.31e-07!54 | |ontology_enrichment_celltype=CL:0000055!2.87e-12!180;CL:0000183!7.92e-09!59;CL:0000393!7.93e-09!60;CL:0000211!7.93e-09!60;CL:0000680!1.54e-07!57;CL:0000056!1.54e-07!57;CL:0000355!1.54e-07!57;CL:0000187!2.31e-07!54 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,7.05e-09,61;CL:0000211,7.05e-09,61;CL:0000680,1.47e-07,58;CL:0000056,1.47e-07,58;CL:0000355,1.47e-07,58;CL:0000187,2.26e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.75e-30!365;UBERON:0000481!2.97e-30!347;UBERON:0000119!1.04e-28!312;UBERON:0000483!3.11e-28!309;UBERON:0003075!3.16e-28!86;UBERON:0007284!3.16e-28!86;UBERON:0005743!1.81e-27!86;UBERON:0000073!2.39e-26!94;UBERON:0001016!2.39e-26!94;UBERON:0000025!2.79e-26!194;UBERON:0001049!5.16e-26!57;UBERON:0005068!5.16e-26!57;UBERON:0006241!5.16e-26!57;UBERON:0007135!5.16e-26!57;UBERON:0004111!7.05e-26!241;UBERON:0001017!1.57e-25!82;UBERON:0000477!1.89e-25!286;UBERON:0002346!2.99e-25!90;UBERON:0002616!7.78e-25!59;UBERON:0007023!3.42e-23!115;UBERON:0003056!1.45e-22!61;UBERON:0004121!2.20e-22!169;UBERON:0000033!3.02e-22!123;UBERON:0000153!1.45e-21!129;UBERON:0007811!1.45e-21!129;UBERON:0000924!1.05e-20!173;UBERON:0006601!1.05e-20!173;UBERON:0000955!2.61e-20!69;UBERON:0006238!2.61e-20!69;UBERON:0000468!6.54e-20!659;UBERON:0002780!1.35e-19!41;UBERON:0001890!1.35e-19!41;UBERON:0006240!1.35e-19!41;UBERON:0003080!1.66e-19!42;UBERON:0000922!2.03e-16!612;UBERON:0000467!6.11e-16!625;UBERON:0002020!7.05e-16!34;UBERON:0003528!7.05e-16!34;UBERON:0000480!1.13e-15!626;UBERON:0001893!2.15e-15!34;UBERON:0002791!2.67e-15!33;UBERON:0002050!2.58e-14!605;UBERON:0005423!2.58e-14!605;UBERON:0001869!3.08e-14!32;UBERON:0000923!6.41e-14!604;UBERON:0005291!6.41e-14!604;UBERON:0006598!6.41e-14!604;UBERON:0002532!6.41e-14!604;UBERON:0005256!1.30e-13!143;UBERON:0000064!4.12e-12!219;UBERON:0000956!2.28e-11!25;UBERON:0000203!2.28e-11!25;UBERON:0002619!2.96e-10!22;UBERON:0002100!6.51e-10!216;UBERON:0000914!9.72e-10!83;UBERON:0002329!9.72e-10!83;UBERON:0003077!9.72e-10!83;UBERON:0003059!9.72e-10!83;UBERON:0007282!9.72e-10!83;UBERON:0009618!9.72e-10!83;UBERON:0007285!9.72e-10!83;UBERON:0000062!1.96e-09!511;UBERON:0001950!3.36e-09!20;UBERON:0003914!5.74e-09!118;UBERON:0004290!2.44e-08!70;UBERON:0002385!8.93e-08!63;UBERON:0001015!8.93e-08!63;UBERON:0000383!8.93e-08!63;UBERON:0003076!1.12e-07!15;UBERON:0003057!1.12e-07!15;UBERON:0003104!1.32e-07!238;UBERON:0009142!1.32e-07!238;UBERON:0003103!1.49e-07!69;UBERON:0001134!1.71e-07!61;UBERON:0002036!1.71e-07!61;UBERON:0003082!1.71e-07!61;UBERON:0000490!8.42e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.56e-15;41!UBERON:0001890;4.56e-15;41!UBERON:0000073;6.65e-15;53!UBERON:0002616;6.65e-15;53!UBERON:0003528;2.83e-14;34!UBERON:0002020;2.83e-14;34!UBERON:0001893;6.57e-14;34!UBERON:0002791;7.83e-14;32!UBERON:0001869;1.61e-13;32!UBERON:0000956;9.17e-12;25!UBERON:0000203;9.17e-12;25!UBERON:0002619;1.17e-10;22!UBERON:0001017;3.26e-10;75!UBERON:0001950;1.44e-09;20!UBERON:0000955;1.44e-09;68!UBERON:0001016;5.12e-08;83!UBERON:0007023;2.21e-07;114 | |||
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|phase1_expression=1.09007027562334,0.428201047781966,1.69145284915165,2.00146596706261,3.5756887554183,1.74467704820074,2.53299878168311,6.94891860769514,1.04474251279935,10.8122932060664,9.07141518364156,3.71350332621293,3.4289707169699,17.6985884732867,13.9186897805725,0.672325146451775,2.41077811209591,1.46062018077475,4.39139518911456,12.8045900399859,7.14002419354885,11.2843699732112,17.4603952149945,6.98059567871709,11.6754654823167,0,0,0,0,0,0.309632246632152,0,0.90361775633475,1.47901604066715,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5045493051169,11.4019146149618,6.00954040664593,3.97583067623023,12.5334477658972,10.2841028462185,7.95285947051099,4.86634870302636,19.7577767872902,2.4390233720882,13.7900613538208,58.0892199832356,5.10013403609559,0.741568885568859,0,0.174129737299267,0,0,0,0,3.37896092523399,4.30117297553062,2.42998351125316,2.26123176769604,0.419499436209906,3.57653454522088,1.04497483268405,4.65150166504792,2.13459757612026,3.68192674041137,1.61131726843659,2.28081631715554,2.4406205754817,0.367663080345869,2.43042584364528,4.46498641420399,4.93964619777574,2.25222960966644,3.06633274931766,0.949265659568129,3.66403487860815,0,0,6.10531672999548,0.993943903390637,3.29239330327907,5.95841313659485,5.16305917347865,3.90135220418193,5.04609840128076,3.20246987189115,4.44001587150888,4.66816553099649,4.04132016209064,2.45192854670188,8.02194366518136,8.64263886719998,13.3563216145264,4.37024107562449,9.69802096625564,7.92078006924546,5.40198693761318,2.26622122115384,4.07307339436521,8.9827835352153,9.33540811569437,12.6057453034434,4.75201142912821,6.92347401979959,7.28129089550421,7.18618141816238,10.7735112930602,10.1346001096291,7.75779523355712,6.14568669233173,2.14541457059314,7.06118876861005,3.74326204428069,3.94657198515496,5.76604949810132,3.17897851739343,2.70081986475962,3.81294358182224,3.09168648054755,0.930584281657949,0.337552664482532,0.292311015483596,6.31084435610286,4.05019554026117,12.2851003182297,6.03516307278244,3.32481924151213,6.61286310010902,0.773043412653187,0.272746120590835,0,6.46460642486856,4.90360142789496,7.55260628651869,10.1587833915063,9.08355063152262,2.18986415445498,3.12899064659632,5.14592750554308,12.4321429217232,6.50115099244771,8.66255378003503,0,0,0,0,0,0,0,0,0,5.16708818237254,5.60967095213783,6.9967581926338,11.7606969108434,7.60530208930985,7.86261773342101,7.68026878685825,0,0,6.51957679134397,0,0,0,5.74048359982883,11.077482380551,15.5990217791937,12.9898207822746,19.0125864159126,9.15787815039409,2.59859605969933,2.77791307545966,1.90254152234598,0.790204397959275,0.858486162094873,0,0,0,0,0.16798212819886,0.708875486211932,0.447792613514241,0,0,0,0,0,0,0.12624243342638,4.69884417762051,5.72982638337417,5.86087236050235,5.13217338068116,3.29047976650635,2.40274446275134,3.14409075893636,4.82163662685051,7.84728123899904,4.18028229179415,1.16344544182,17.8828222925941,3.381211010224,3.19125739901845,5.2003718455683,12.603161338845,8.5109479213967,13.8539533088372,6.86294369559108,9.22456729165453,9.05564370458846,3.58309802723109,6.75244702610837,4.75171123760058,1.80863626235752,3.48613383440118,6.79816340037988,0,0,0,5.75099653179798,14.9320516584348,5.70547620162874,3.18518874668674,7.60262393436419,4.65558504423729,0,0,0,0,23.8848946769116,19.5209780786433,10.05275456611,11.8936548387388,14.6725912880228,0,0,0,18.8944897247475,20.0068208423871,11.6643960190886,1.87173775377726,3.39015078714607,2.05013139544115,3.86566669475954,5.11608369537122,4.5481500811197,7.24311499047534,3.98535359121262,11.2465192810439,11.0342190374465,16.2514960694075,14.4120238000559,0,0,0,1.21251028578504,8.32177197552485,3.93107381328584,1.73675465473144,0.306923946576125,0.561320188866147,2.56278298511402,1.53512174720011,2.41280881715411,2.96836132889982,4.62629081407967,7.10246901252508,6.81655394914616,4.15403543346897,4.76462551685833,0.120859449591622,0.40101294060657,0.0920809889358963,5.62590796006573,10.0150142403694,7.34296723772775,8.57279264524082,12.1684232624975,11.7652465376528,8.76835347919564,14.3550215294311,5.68666920354483,3.40187410553031,2.80690690932781,3.08454505380579,11.108803939298,15.0506932156456,8.6657932835313,9.97291210714469,4.47749509444357,0,0,7.94995387860806,18.3688201591835,16.2689197332152,9.06760902499956,0,0,1.14853107599234,0.650060246036521,4.82051789532479,12.2771812230995,6.77813915304435,4.1445992176055,3.58375088459779,10.204923262486,9.42608510442485,8.01130297711348,7.56772302997267,1.81813406897076,1.53752053892085,1.53135254993501,2.023155617111,5.57814659156743,5.35180989612088,2.7881490806424,6.46870518369786,5.85536633348724,3.47973196830029,6.4863476686372,5.29562080945368,5.58237554039501,8.22586504268687,4.38449446024797,4.60616024360401,2.99557291623744,8.90969094192623,3.924743200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| ||
|short_description=p1@DNALI1 | |short_description=p1@DNALI1 | ||
}} | }} |
Latest revision as of 22:01, 17 September 2015
Short description: | p1@DNALI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DNALI1_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000296218, ENST00000467181, ENST00000490312, NM_003462, uc001cbj.2, uc010oie.1_5end |
EntrezGene: | DNALI1 |
HGNC: | 14353 |
UniProt: | O14645 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 7.05e-09 | 61 |
electrically active cell | 7.05e-09 | 61 |
muscle precursor cell | 1.47e-07 | 58 |
myoblast | 1.47e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.47e-07 | 58 |
muscle cell | 2.26e-07 | 55 |