FFCP PHASE1:Hg19::chr11:64851367..64851377,-: Difference between revisions
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|id=chr11:64851367..64851377,-
|short_description=p6@CDCA5
|description=CAGE_peak_6_at_CDCA5_5end
|association_with_transcript=0bp_to_ENST00000462902,ENST0000053301...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=113130 | |EntrezGene=113130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14626 | |HGNC=14626 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000462902,ENST00000533015_5end | |||
|cluster_id=chr11:64851367..64851377,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_CDCA5_5end | |||
|id=chr11:64851367..64851377,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;1.12e-17;3!CL:1000428;1.12e-17;3!CL:0002559;3.60e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.12e-17,3;CL:1000428,1.12e-17,3;CL:0002559,3.60e-11,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!2.93e-10!69;UBERON:0006238!2.93e-10!69;UBERON:0002616!1.31e-09!59;UBERON:0001049!1.49e-08!57;UBERON:0005068!1.49e-08!57;UBERON:0006241!1.49e-08!57;UBERON:0007135!1.49e-08!57;UBERON:0001950!1.98e-08!20;UBERON:0001017!3.95e-08!82;UBERON:0001872!1.13e-07!5;UBERON:0002619!1.31e-07!22;UBERON:0005743!1.32e-07!86;UBERON:0000073!1.41e-07!94;UBERON:0001016!1.41e-07!94;UBERON:0001893!1.47e-07!34;UBERON:0002680!5.27e-07!9;UBERON:0001895!5.27e-07!9;UBERON:0010092!5.27e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000412;1.12e-17;3!UBERON:0001992;1.12e-17;3!UBERON:0002073;3.60e-11;5!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0002067;8.85e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000412,1.12e-17,3;UBERON:0001992,1.12e-17,3;UBERON:0002073,3.60e-11,5;UBERON:0005086,3.60e-11,5;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0002067,8.85e-07,9;UBERON:0004016,8.85e-07,9;UBERON:0010083,8.85e-07,9 | |||
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| ||
|short_description=p6@CDCA5 | |||
}} | }} |
Latest revision as of 06:08, 19 September 2015
Short description: | p6@CDCA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CDCA5_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000462902, ENST00000533015_5end |
EntrezGene: | CDCA5 |
HGNC: | 14626 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.12e-17 | 3 |
stem cell of epidermis | 1.12e-17 | 3 |
hair follicle cell | 3.60e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
dermal papilla | 1.12e-17 | 3 |
papillary layer of dermis | 1.12e-17 | 3 |
hair follicle | 3.60e-11 | 5 |
hair follicle placode | 3.60e-11 | 5 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
dermis | 8.85e-07 | 9 |
dermatome | 8.85e-07 | 9 |
future dermis | 8.85e-07 | 9 |