FFCP PHASE1:Hg19::chr11:65683357..65683374,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:65683357..65683374,+
|short_description=p@chr11:65683357..65683374,+
|description=CAGE_peak_at_chr11:65683357..65683374,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:65683357..65683374,+ | |||
|description=CAGE_peak_at_chr11:65683357..65683374,+ | |||
|id=chr11:65683357..65683374,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.76e-13!42;CL:0000557!6.38e-12!71;CL:0000860!1.16e-11!45;CL:0000839!2.77e-11!70;CL:0002009!3.99e-11!65;CL:0000766!4.09e-11!76;CL:0002194!8.06e-11!63;CL:0000576!8.06e-11!63;CL:0000040!8.06e-11!63;CL:0000559!8.06e-11!63;CL:0000063!6.80e-08!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.09e-23;33!CL:0002057;2.09e-23;33!CL:0000473;4.37e-17;39!CL:0000234;4.37e-17;39!CL:0002097;3.91e-14;2!CL:0000576;2.58e-10;48!CL:0000174;1.01e-09;3!CL:0000766;3.74e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.25e-20,42;CL:0002057,6.25e-20,42;CL:0000473,3.70e-17,48;CL:0000234,3.70e-17,48;CL:0002097,4.47e-14,2;CL:0002194,2.82e-13,59;CL:0000576,2.82e-13,59;CL:0000040,2.82e-13,59;CL:0000559,2.82e-13,59;CL:0002009,8.93e-13,61;CL:0000839,1.18e-11,66;CL:0000557,1.89e-11,67;CL:0000766,1.63e-10,72;CL:0000174,1.11e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.69e-17;42 | |||
|ontology_enrichment_disease=DOID:1749!5.28e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3111;5.33e-08;1!DOID:3603;5.33e-08;1!DOID:1749;1.03e-07;14!DOID:3112;1.26e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,3.80e-08,1;DOID:3603,3.80e-08,1;DOID:3112,9.72e-08,1;DOID:1749,1.05e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001474!1.79e-10!86;UBERON:0002371!5.41e-10!80;UBERON:0004765!2.25e-09!101;UBERON:0001434!2.25e-09!101;UBERON:0002405!2.69e-08!115;UBERON:0000062!1.55e-07!511;UBERON:0002193!2.87e-07!112;UBERON:0002390!7.41e-07!102;UBERON:0003061!7.41e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;1.01e-09;3!UBERON:0001235;1.01e-09;3!UBERON:0006858;1.01e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.48e-10,76;UBERON:0002369,1.11e-09,3;UBERON:0001235,1.11e-09,3;UBERON:0006858,1.11e-09,3;UBERON:0001474,5.57e-09,82;UBERON:0004765,5.34e-08,90;UBERON:0002405,1.13e-07,93;UBERON:0002390,3.54e-07,98;UBERON:0003061,3.54e-07,98;UBERON:0001434,5.41e-07,100 | |||
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| ||
|short_description=p@chr11:65683357..65683374,+ | |||
}} | }} |
Latest revision as of 00:52, 24 July 2015
Short description: | p@chr11:65683357..65683374, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:65683357..65683374, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.25e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.25e-20 | 42 |
defensive cell | 3.70e-17 | 48 |
phagocyte | 3.70e-17 | 48 |
cortical cell of adrenal gland | 4.47e-14 | 2 |
monopoietic cell | 2.82e-13 | 59 |
monocyte | 2.82e-13 | 59 |
monoblast | 2.82e-13 | 59 |
promonocyte | 2.82e-13 | 59 |
macrophage dendritic cell progenitor | 8.93e-13 | 61 |
myeloid lineage restricted progenitor cell | 1.18e-11 | 66 |
granulocyte monocyte progenitor cell | 1.89e-11 | 67 |
myeloid leukocyte | 1.63e-10 | 72 |
steroid hormone secreting cell | 1.11e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.48e-10 | 76 |
adrenal gland | 1.11e-09 | 3 |
adrenal cortex | 1.11e-09 | 3 |
adrenal/interrenal gland | 1.11e-09 | 3 |
bone element | 5.57e-09 | 82 |
skeletal element | 5.34e-08 | 90 |
immune system | 1.13e-07 | 93 |
hematopoietic system | 3.54e-07 | 98 |
blood island | 3.54e-07 | 98 |
skeletal system | 5.41e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 3.80e-08 | 1 |
mucinous cystadenocarcinoma | 3.80e-08 | 1 |
papillary adenocarcinoma | 9.72e-08 | 1 |
squamous cell carcinoma | 1.05e-07 | 14 |