FFCP PHASE1:Hg19::chr11:68049776..68049787,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:68049776..68049787,+
|short_description=p@chr11:68049776..68049787,+
|description=CAGE_peak_at_chr11:68049776..68049787,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:68049776..68049787,+ | |||
|description=CAGE_peak_at_chr11:68049776..68049787,+ | |||
|id=chr11:68049776..68049787,+ | |||
|ontology_enrichment_celltype=CL:0002032!5.84e-15!165;CL:0000837!5.84e-15!165;CL:0000037!5.51e-14!172;CL:0000566!5.51e-14!172;CL:0000988!1.17e-13!182;CL:0002274!7.06e-11!5;CL:0000457!7.06e-11!5;CL:0002191!7.06e-11!5;CL:0000097!7.06e-11!5;CL:0000831!7.06e-11!5;CL:0002028!7.06e-11!5;CL:0000945!7.88e-09!24;CL:0000826!7.88e-09!24;CL:0000763!1.09e-08!112;CL:0000049!1.09e-08!112;CL:0000838!4.44e-07!52;CL:0000785!4.45e-07!2;CL:0000955!4.45e-07!2;CL:0000818!4.45e-07!2;CL:0000954!4.45e-07!2;CL:0000816!4.45e-07!2;CL:0000542!6.80e-07!53;CL:0000051!6.80e-07!53;CL:0000764!8.64e-07!2;CL:0000765!8.64e-07!2;CL:0000050!8.64e-07!2;CL:0000038!8.64e-07!2;CL:0000558!8.64e-07!2;CL:0000547!8.64e-07!2;CL:0000549!8.64e-07!2;CL:0000550!8.64e-07!2;CL:0000552!8.64e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.11e-30;5!CL:0000163;3.16e-17;9!CL:0000763;3.20e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.34e-30,5;CL:0002028,2.34e-30,5;CL:0000163,3.34e-17,9;CL:0000763,1.20e-11,108;CL:0000049,1.20e-11,108;CL:0002032,1.40e-07,161;CL:0000837,1.40e-07,161;CL:0000037,3.12e-07,168;CL:0000988,7.99e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!3.76e-17!51;DOID:0060083!3.76e-17!51;DOID:1240!2.96e-14!39;DOID:8692!4.92e-14!31 | |||
|ontology_enrichment_disease_v019=DOID:9119;2.66e-18;1!DOID:8552;3.44e-18;1!DOID:8692;2.10e-17;31!DOID:2531;2.23e-10;51!DOID:0060083;2.23e-10;51!DOID:1240;7.02e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.10e-19,31;DOID:9119,2.66e-18,1;DOID:8552,3.16e-18,1;DOID:2531,1.52e-15,51;DOID:0060083,1.52e-15,51;DOID:1240,3.61e-15,39 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.85e-09!15;UBERON:0000179!1.85e-09!15;UBERON:0000463!1.85e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;9.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,9.64e-07,3;UBERON:0004854,9.64e-07,3;UBERON:0009034,9.64e-07,3;UBERON:0002095,9.64e-07,3;UBERON:0004782,9.64e-07,3;UBERON:0003281,9.64e-07,3;UBERON:0009664,9.64e-07,3;UBERON:0002296,9.64e-07,3;UBERON:0005602,9.64e-07,3;UBERON:0001179,9.64e-07,3;UBERON:0006293,9.64e-07,3 | |||
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| ||
|short_description=p@chr11:68049776..68049787,+ | |||
}} | }} |
Latest revision as of 01:49, 24 July 2015
Short description: | p@chr11:68049776..68049787, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:68049776..68049787, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.34e-30 | 5 |
basophil mast progenitor cell | 2.34e-30 | 5 |
endocrine cell | 3.34e-17 | 9 |
myeloid cell | 1.20e-11 | 108 |
common myeloid progenitor | 1.20e-11 | 108 |
hematopoietic oligopotent progenitor cell | 1.40e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.40e-07 | 161 |
hematopoietic stem cell | 3.12e-07 | 168 |
hematopoietic cell | 7.99e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 9.64e-07 | 3 |
gastrointestinal system mesentery | 9.64e-07 | 3 |
stomach region | 9.64e-07 | 3 |
mesentery | 9.64e-07 | 3 |
gastrointestinal system serosa | 9.64e-07 | 3 |
mesentery of stomach | 9.64e-07 | 3 |
gut mesentery | 9.64e-07 | 3 |
dorsal mesentery | 9.64e-07 | 3 |
dorsal mesogastrium | 9.64e-07 | 3 |
peritoneal cavity | 9.64e-07 | 3 |
spleen primordium | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.10e-19 | 31 |
acute myeloid leukemia | 2.66e-18 | 1 |
chronic myeloid leukemia | 3.16e-18 | 1 |
hematologic cancer | 1.52e-15 | 51 |
immune system cancer | 1.52e-15 | 51 |
leukemia | 3.61e-15 | 39 |