FFCP PHASE1:Hg19::chr20:46414183..46414264,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55959 | |EntrezGene=55959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20392 | |HGNC=20392 | ||
|TSSclassifier=strong | |||
|UniProt=B1AMP9 | |UniProt=B1AMP9 | ||
|association_with_transcript=0bp_to_ENST00000437955_5end | |association_with_transcript=0bp_to_ENST00000437955_5end | ||
|cluster_id=chr20:46414183..46414264,- | |||
|coexpression_cluster_id=C4048 | |||
|description=CAGE_peak_1_at_SULF2_5end | |description=CAGE_peak_1_at_SULF2_5end | ||
|id=chr20:46414183..46414264,- | |id=chr20:46414183..46414264,- | ||
|ontology_enrichment_celltype=CL:0002057!9.05e-19!42;CL:0000860!2.72e-15!45;CL:0002139!4.17e-11!24;CL:0000766!1.62e-10!76;CL:0002194!6.99e-10!63;CL:0000576!6.99e-10!63;CL:0000040!6.99e-10!63;CL:0000559!6.99e-10!63;CL:0000115!1.67e-09!35;CL:0002009!4.44e-09!65;CL:0000071!5.13e-08!18;CL:0002546!5.13e-08!18;CL:0002078!8.56e-08!44;CL:0000557!6.57e-07!71 | |ontology_enrichment_celltype=CL:0002057!9.05e-19!42;CL:0000860!2.72e-15!45;CL:0002139!4.17e-11!24;CL:0000766!1.62e-10!76;CL:0002194!6.99e-10!63;CL:0000576!6.99e-10!63;CL:0000040!6.99e-10!63;CL:0000559!6.99e-10!63;CL:0000115!1.67e-09!35;CL:0002009!4.44e-09!65;CL:0000071!5.13e-08!18;CL:0002546!5.13e-08!18;CL:0002078!8.56e-08!44;CL:0000557!6.57e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.74e-15;33!CL:0002057;5.74e-15;33!CL:0002139;2.58e-11;24!CL:0000473;7.45e-10;39!CL:0000234;7.45e-10;39!CL:0000576;2.91e-09;48!CL:0000115;6.41e-09;36!CL:0000071;3.84e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.82e-19,42;CL:0002057,3.82e-19,42;CL:0000473,1.43e-15,48;CL:0000234,1.43e-15,48;CL:0000766,3.69e-13,72;CL:0002194,1.99e-12,59;CL:0000576,1.99e-12,59;CL:0000040,1.99e-12,59;CL:0000559,1.99e-12,59;CL:0002139,2.58e-11,24;CL:0002009,3.81e-11,61;CL:0000115,3.92e-10,36;CL:0000557,1.02e-08,67;CL:0000839,1.97e-08,66;CL:0000071,3.71e-08,18;CL:0002546,3.71e-08,18;CL:0002078,4.62e-08,45 | |||
|ontology_enrichment_development_v019=CL:0002057;3.39e-14;42!CL:0002546;3.84e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.02e-25!659;UBERON:0000467!4.43e-22!625;UBERON:0000480!1.13e-21!626;UBERON:0000922!2.82e-18!612;UBERON:0002050!1.61e-17!605;UBERON:0005423!1.61e-17!605;UBERON:0000923!4.41e-17!604;UBERON:0005291!4.41e-17!604;UBERON:0006598!4.41e-17!604;UBERON:0002532!4.41e-17!604;UBERON:0007023!1.03e-13!115;UBERON:0000062!5.57e-12!511;UBERON:0001986!5.13e-08!18;UBERON:0004638!5.13e-08!18;UBERON:0004852!5.13e-08!18;UBERON:0004111!2.93e-07!241;UBERON:0002193!3.23e-07!112;UBERON:0002405!4.92e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.84e-08;18!UBERON:0001986;3.84e-08;18!UBERON:0004852;3.84e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,6.71e-18,592;UBERON:0005423,1.36e-17,581;UBERON:0002050,7.13e-16,564;UBERON:0000923,9.58e-15,560;UBERON:0010316,9.58e-15,560;UBERON:0005291,9.58e-15,560;UBERON:0006598,9.58e-15,560;UBERON:0010317,9.58e-15,560;UBERON:0002532,9.58e-15,560;UBERON:0007023,1.64e-13,114;UBERON:0002193,6.65e-09,108;UBERON:0004638,3.71e-08,18;UBERON:0001986,3.71e-08,18;UBERON:0004852,3.71e-08,18;UBERON:0003081,1.29e-07,203;UBERON:0004111,4.58e-07,240;UBERON:0002390,5.93e-07,98;UBERON:0003061,5.93e-07,98 | |||
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| ||
|short_description=p1@SULF2 | |short_description=p1@SULF2 | ||
}} | }} |
Latest revision as of 16:37, 16 September 2015
Short description: | p1@SULF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SULF2_5end |
Coexpression cluster: | C4048_lung_Eosinophils_breast_MCF7_Endothelial_Neutrophils_salivary |
Association with transcript: | 0bp_to_ENST00000437955_5end |
EntrezGene: | SULF2 |
HGNC: | 20392 |
UniProt: | B1AMP9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.82e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.82e-19 | 42 |
defensive cell | 1.43e-15 | 48 |
phagocyte | 1.43e-15 | 48 |
myeloid leukocyte | 3.69e-13 | 72 |
monopoietic cell | 1.99e-12 | 59 |
monocyte | 1.99e-12 | 59 |
monoblast | 1.99e-12 | 59 |
promonocyte | 1.99e-12 | 59 |
endothelial cell of vascular tree | 2.58e-11 | 24 |
macrophage dendritic cell progenitor | 3.81e-11 | 61 |
endothelial cell | 3.92e-10 | 36 |
granulocyte monocyte progenitor cell | 1.02e-08 | 67 |
myeloid lineage restricted progenitor cell | 1.97e-08 | 66 |
blood vessel endothelial cell | 3.71e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.71e-08 | 18 |
meso-epithelial cell | 4.62e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
embryo | 6.71e-18 | 592 |
developing anatomical structure | 1.36e-17 | 581 |
embryonic structure | 7.13e-16 | 564 |
germ layer | 9.58e-15 | 560 |
germ layer / neural crest | 9.58e-15 | 560 |
embryonic tissue | 9.58e-15 | 560 |
presumptive structure | 9.58e-15 | 560 |
germ layer / neural crest derived structure | 9.58e-15 | 560 |
epiblast (generic) | 9.58e-15 | 560 |
adult organism | 1.64e-13 | 114 |
hemolymphoid system | 6.65e-09 | 108 |
blood vessel endothelium | 3.71e-08 | 18 |
endothelium | 3.71e-08 | 18 |
cardiovascular system endothelium | 3.71e-08 | 18 |
lateral plate mesoderm | 1.29e-07 | 203 |
anatomical conduit | 4.58e-07 | 240 |
hematopoietic system | 5.93e-07 | 98 |
blood island | 5.93e-07 | 98 |