FFCP PHASE1:Hg19::chr22:29965263..29965274,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:29965263..29965274,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_at_chr22:29965263..29965274,- | |description=CAGE_peak_at_chr22:29965263..29965274,- | ||
|id=chr22:29965263..29965274,- | |id=chr22:29965263..29965274,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.47e-25;12!CL:0002600;1.17e-17;2!CL:0002253;1.17e-17;2!CL:0002563;1.63e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.41e-25,12;CL:0002600,1.07e-17,2;CL:0002253,1.27e-17,2;CL:0000223,1.06e-09,58;CL:0002563,1.70e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.50e-28;11!UBERON:0009497;1.15e-23;13!UBERON:0003104;1.94e-17;31!UBERON:0001041;1.01e-10;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;8.46e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.02e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.79e-16;19!UBERON:0006925;1.79e-16;19!UBERON:0002423;1.03e-12;25!UBERON:0002365;1.17e-09;31!UBERON:0002330;1.17e-09;31!UBERON:0001052;1.63e-09;4!UBERON:0001242;1.63e-09;4!UBERON:0001262;1.63e-09;4!UBERON:0004786;1.63e-09;4!UBERON:0004808;1.63e-09;4!UBERON:0001277;1.63e-09;4!UBERON:0002368;4.03e-09;33!UBERON:0004907;7.25e-08;5!UBERON:0000949;3.35e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.75e-16,19;UBERON:0006925,1.75e-16,19;UBERON:0008836,1.75e-16,19;UBERON:0008835,2.38e-14,22;UBERON:0003894,2.38e-14,22;UBERON:0009854,9.23e-14,23;UBERON:0007499,1.01e-12,25;UBERON:0009497,1.01e-12,25;UBERON:0000015,1.01e-12,25;UBERON:0002423,1.01e-12,25;UBERON:0006235,1.01e-12,25;UBERON:0004161,1.01e-12,25;UBERON:0009856,2.90e-12,26;UBERON:0002365,2.08e-10,31;UBERON:0002330,2.08e-10,31;UBERON:0003929,2.23e-10,54;UBERON:0001052,1.70e-09,4;UBERON:0001242,1.70e-09,4;UBERON:0001262,1.70e-09,4;UBERON:0004786,1.70e-09,4;UBERON:0004808,1.70e-09,4;UBERON:0001277,1.70e-09,4;UBERON:0002368,2.65e-09,35;UBERON:0004907,7.49e-08,5;UBERON:0000949,2.18e-07,45;UBERON:0004921,2.25e-07,118;UBERON:0005911,5.27e-07,82 | |||
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| ||
|short_description=p@chr22:29965263..29965274,- | |short_description=p@chr22:29965263..29965274,- | ||
}} | }} |
Latest revision as of 20:00, 28 July 2015
Short description: | p@chr22:29965263..29965274, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:29965263..29965274, - |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.41e-25 | 12 |
smooth muscle cell of trachea | 1.07e-17 | 2 |
epithelial cell of large intestine | 1.27e-17 | 2 |
endodermal cell | 1.06e-09 | 58 |
intestinal epithelial cell | 1.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 1.75e-16 | 19 |
digestive gland | 1.75e-16 | 19 |
liver bud | 1.75e-16 | 19 |
hepatic diverticulum | 2.38e-14 | 22 |
liver primordium | 2.38e-14 | 22 |
digestive tract diverticulum | 9.23e-14 | 23 |
epithelial sac | 1.01e-12 | 25 |
epithelium of foregut-midgut junction | 1.01e-12 | 25 |
anatomical boundary | 1.01e-12 | 25 |
hepatobiliary system | 1.01e-12 | 25 |
foregut-midgut junction | 1.01e-12 | 25 |
septum transversum | 1.01e-12 | 25 |
sac | 2.90e-12 | 26 |
exocrine gland | 2.08e-10 | 31 |
exocrine system | 2.08e-10 | 31 |
gut epithelium | 2.23e-10 | 54 |
rectum | 1.70e-09 | 4 |
intestinal mucosa | 1.70e-09 | 4 |
wall of intestine | 1.70e-09 | 4 |
gastrointestinal system mucosa | 1.70e-09 | 4 |
gastrointestinal system epithelium | 1.70e-09 | 4 |
intestinal epithelium | 1.70e-09 | 4 |
endocrine gland | 2.65e-09 | 35 |
lower digestive tract | 7.49e-08 | 5 |
endocrine system | 2.18e-07 | 45 |
subdivision of digestive tract | 2.25e-07 | 118 |
endo-epithelium | 5.27e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.02e-08 | 39 |