FFCP PHASE1:Hg19::chr22:37281783..37281788,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:37281783..37281788,+ | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr22:37281783..37281788,+ | |description=CAGE_peak_at_chr22:37281783..37281788,+ | ||
|id=chr22:37281783..37281788,+ | |id=chr22:37281783..37281788,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.07e-22!42;CL:0000767!2.53e-21!3;CL:0000842!1.42e-20!3;CL:0000860!2.10e-20!45;CL:0000766!3.54e-20!76;CL:0000738!7.99e-16!140;CL:0000224!1.37e-15!4;CL:0002009!1.52e-15!65;CL:0000763!1.54e-14!112;CL:0000049!1.54e-14!112;CL:0000557!4.82e-14!71;CL:0000094!5.55e-14!8;CL:0002194!1.10e-13!63;CL:0000576!1.10e-13!63;CL:0000040!1.10e-13!63;CL:0000559!1.10e-13!63;CL:0000037!3.54e-12!172;CL:0000566!3.54e-12!172;CL:0000839!4.08e-12!70;CL:0000988!2.67e-11!182;CL:0000080!1.41e-10!6;CL:0000081!3.25e-10!11;CL:0002087!3.62e-10!119;CL:0002541!3.75e-10!3;CL:0002032!7.80e-09!165;CL:0000837!7.80e-09!165;CL:0002031!4.66e-07!124 | |ontology_enrichment_celltype=CL:0002057!5.07e-22!42;CL:0000767!2.53e-21!3;CL:0000842!1.42e-20!3;CL:0000860!2.10e-20!45;CL:0000766!3.54e-20!76;CL:0000738!7.99e-16!140;CL:0000224!1.37e-15!4;CL:0002009!1.52e-15!65;CL:0000763!1.54e-14!112;CL:0000049!1.54e-14!112;CL:0000557!4.82e-14!71;CL:0000094!5.55e-14!8;CL:0002194!1.10e-13!63;CL:0000576!1.10e-13!63;CL:0000040!1.10e-13!63;CL:0000559!1.10e-13!63;CL:0000037!3.54e-12!172;CL:0000566!3.54e-12!172;CL:0000839!4.08e-12!70;CL:0000988!2.67e-11!182;CL:0000080!1.41e-10!6;CL:0000081!3.25e-10!11;CL:0002087!3.62e-10!119;CL:0002541!3.75e-10!3;CL:0002032!7.80e-09!165;CL:0000837!7.80e-09!165;CL:0002031!4.66e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.17e-39;33!CL:0002057;3.17e-39;33!CL:0000473;1.60e-28;39!CL:0000234;1.60e-28;39!CL:0000576;2.46e-22;48!CL:0000766;5.23e-12;69!CL:0000763;9.44e-09;100!CL:0000767;1.82e-07;3!CL:0002541;3.35e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.22e-34,42;CL:0002057,4.22e-34,42;CL:0000473,8.58e-30,48;CL:0000234,8.58e-30,48;CL:0000766,4.23e-24,72;CL:0002194,9.40e-24,59;CL:0000576,9.40e-24,59;CL:0000040,9.40e-24,59;CL:0000559,9.40e-24,59;CL:0002009,5.67e-23,61;CL:0000839,3.17e-21,66;CL:0000557,6.61e-21,67;CL:0000763,5.87e-16,108;CL:0000049,5.87e-16,108;CL:0000738,1.44e-12,136;CL:0002087,4.93e-12,115;CL:0002031,1.64e-11,120;CL:0002032,1.61e-10,161;CL:0000837,1.61e-10,161;CL:0000037,4.69e-10,168;CL:0000988,1.65e-09,177;CL:0000767,1.82e-07,3;CL:0002541,3.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.56e-26;42!CL:0000049;1.28e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.45e-18!102;UBERON:0003061!2.45e-18!102;UBERON:0002193!2.11e-16!112;UBERON:0002371!3.29e-12!80;UBERON:0001474!3.38e-11!86;UBERON:0000178!4.01e-11!15;UBERON:0000179!4.01e-11!15;UBERON:0000463!4.01e-11!15;UBERON:0000476!3.75e-10!3;UBERON:0000920!3.75e-10!3;UBERON:0003124!1.72e-09!7;UBERON:0004765!3.43e-09!101;UBERON:0001434!3.43e-09!101;UBERON:0003081!6.12e-09!216;UBERON:0005631!4.14e-08!14;UBERON:0000158!4.14e-08!14;UBERON:0002405!8.63e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.35e-07;3!UBERON:0000920;3.35e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.09e-18,76;UBERON:0001474,4.86e-17,82;UBERON:0004765,1.70e-15,90;UBERON:0002405,5.52e-15,93;UBERON:0002390,3.36e-14,98;UBERON:0003061,3.36e-14,98;UBERON:0001434,6.59e-14,100;UBERON:0002193,7.62e-13,108;UBERON:0002204,4.17e-08,167;UBERON:0000920,3.35e-07,3 | |||
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|short_description=p@chr22:37281783..37281788,+ | |short_description=p@chr22:37281783..37281788,+ | ||
}} | }} |
Latest revision as of 20:50, 28 July 2015
Short description: | p@chr22:37281783..37281788, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:37281783..37281788, + |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.22e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.22e-34 | 42 |
defensive cell | 8.58e-30 | 48 |
phagocyte | 8.58e-30 | 48 |
myeloid leukocyte | 4.23e-24 | 72 |
monopoietic cell | 9.40e-24 | 59 |
monocyte | 9.40e-24 | 59 |
monoblast | 9.40e-24 | 59 |
promonocyte | 9.40e-24 | 59 |
macrophage dendritic cell progenitor | 5.67e-23 | 61 |
myeloid lineage restricted progenitor cell | 3.17e-21 | 66 |
granulocyte monocyte progenitor cell | 6.61e-21 | 67 |
myeloid cell | 5.87e-16 | 108 |
common myeloid progenitor | 5.87e-16 | 108 |
leukocyte | 1.44e-12 | 136 |
nongranular leukocyte | 4.93e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.64e-11 | 120 |
hematopoietic oligopotent progenitor cell | 1.61e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.61e-10 | 161 |
hematopoietic stem cell | 4.69e-10 | 168 |
hematopoietic cell | 1.65e-09 | 177 |
basophil | 1.82e-07 | 3 |
chorionic membrane mesenchymal stem cell | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.09e-18 | 76 |
bone element | 4.86e-17 | 82 |
skeletal element | 1.70e-15 | 90 |
immune system | 5.52e-15 | 93 |
hematopoietic system | 3.36e-14 | 98 |
blood island | 3.36e-14 | 98 |
skeletal system | 6.59e-14 | 100 |
hemolymphoid system | 7.62e-13 | 108 |
musculoskeletal system | 4.17e-08 | 167 |
egg chorion | 3.35e-07 | 3 |