FFCP PHASE1:Hg19::chr11:829538..829547,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:829538..829547,+
|short_description=p17@EFCAB4A
|description=CAGE_peak_17_at_EFCAB4A_5end
|association_with_transcript=231bp_to_ENST00000528694_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283229 | |EntrezGene=283229 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28703 | |HGNC=28703 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=231bp_to_ENST00000528694_5end | |||
|cluster_id=chr11:829538..829547,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_17_at_EFCAB4A_5end | |||
|id=chr11:829538..829547,+ | |||
|ontology_enrichment_celltype=CL:0000115!1.45e-11!35;CL:0002139!1.83e-10!24;CL:0000708!1.57e-09!3;CL:0000071!1.62e-09!18;CL:0002546!1.62e-09!18;CL:0002618!1.76e-09!3;CL:0002078!1.41e-08!44;CL:0000213!3.39e-08!57;CL:0000215!3.39e-08!57;CL:0002543!3.72e-08!6;CL:0002575!7.31e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002262;5.56e-26;2!CL:1000398;5.56e-26;2!CL:0002327;8.82e-14;4!CL:0002188;3.42e-11;5!CL:1000746;2.26e-08;7!CL:1000612;2.26e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,5.56e-26,2;CL:1000398,5.56e-26,2;CL:0002327,8.82e-14,4;CL:0002188,3.26e-11,5;CL:1000746,2.18e-08,7;CL:1000612,2.18e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.46e-50;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;8.10e-26;2!DOID:5093;8.82e-14;4!DOID:1612;8.82e-14;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,9.18e-26,2;DOID:5093,8.82e-14,4;DOID:1612,8.82e-14,4 | |||
|ontology_enrichment_uberon=UBERON:0003210!1.57e-09!3;UBERON:0001986!1.62e-09!18;UBERON:0004638!1.62e-09!18;UBERON:0004852!1.62e-09!18;UBERON:0001638!5.07e-08!9;UBERON:0003920!5.07e-08!9;UBERON:0004582!5.07e-08!9;UBERON:0000487!1.61e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;5.56e-26;2!UBERON:0003497;5.56e-26;2!UBERON:0003909;5.56e-26;2!UBERON:0003835;5.56e-26;2!UBERON:0001280;8.00e-18;3!UBERON:0004647;8.00e-18;3!UBERON:0000353;3.04e-14;15!UBERON:0001911;8.82e-14;4!UBERON:0003513;2.03e-08;7!UBERON:0000074;2.26e-08;7!UBERON:0001229;2.26e-08;7!UBERON:0002365;1.10e-07;31!UBERON:0002330;1.10e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,5.56e-26,2;UBERON:0003497,5.56e-26,2;UBERON:0003909,5.56e-26,2;UBERON:0003835,5.56e-26,2;UBERON:0001280,8.00e-18,3;UBERON:0004647,8.00e-18,3;UBERON:0005171,8.00e-18,3;UBERON:0000353,2.94e-14,15;UBERON:0001911,8.82e-14,4;UBERON:0005333,8.82e-14,4;UBERON:0008425,8.82e-14,4;UBERON:0005311,8.82e-14,4;UBERON:0000058,1.72e-11,19;UBERON:0002394,1.32e-09,6;UBERON:0003928,1.32e-09,6;UBERON:0003513,2.03e-08,7;UBERON:0010532,2.18e-08,7;UBERON:0000074,2.18e-08,7;UBERON:0001229,2.18e-08,7;UBERON:0001230,2.18e-08,7;UBERON:0003220,2.18e-08,7;UBERON:0005749,2.18e-08,7;UBERON:0004199,2.18e-08,7;UBERON:0004209,2.18e-08,7;UBERON:0004198,2.18e-08,7;UBERON:0000076,1.49e-07,8;UBERON:0005103,1.69e-07,8;UBERON:0000083,1.69e-07,8;UBERON:0009201,1.69e-07,8;UBERON:0006553,1.69e-07,8;UBERON:0003074,1.69e-07,8;UBERON:0003060,1.69e-07,8;UBERON:0002365,1.80e-07,31;UBERON:0002330,1.80e-07,31;UBERON:0002294,7.91e-07,9;UBERON:0001173,7.91e-07,9;UBERON:0004912,7.91e-07,9;UBERON:0000080,8.37e-07,9;UBERON:0002120,8.37e-07,9;UBERON:0004875,8.37e-07,9;UBERON:0005721,8.37e-07,9;UBERON:0005754,8.37e-07,9;UBERON:0007297,8.37e-07,9 | |||
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| ||
|short_description=p17@EFCAB4A | |||
}} | }} |
Latest revision as of 18:51, 24 September 2015
Short description: | p17@EFCAB4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_EFCAB4A_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 231bp_to_ENST00000528694_5end |
EntrezGene: | EFCAB4A |
HGNC: | 28703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 5.56e-26 | 2 |
endothelial cell of hepatic sinusoid | 5.56e-26 | 2 |
mammary gland epithelial cell | 8.82e-14 | 4 |
glomerular endothelial cell | 3.26e-11 | 5 |
glomerular cell | 2.18e-08 | 7 |
kidney corpuscule cell | 2.18e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 9.18e-26 | 2 |
thoracic cancer | 8.82e-14 | 4 |
breast cancer | 8.82e-14 | 4 |