FFCP PHASE1:Hg19::chr2:1711598..1711606,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:1711598..1711606,- | |||
|description=CAGE_peak_at_chr2:1711598..1711606,- | |description=CAGE_peak_at_chr2:1711598..1711606,- | ||
|id=chr2:1711598..1711606,- | |id=chr2:1711598..1711606,- | ||
|ontology_enrichment_celltype=CL:0005020!8.44e-11!6;CL:0002138!8.44e-11!6;CL:0005022!8.44e-11!6;CL:0000569!4.18e-07!4;CL:0000011!4.18e-07!4 | |ontology_enrichment_celltype=CL:0005020!8.44e-11!6;CL:0002138!8.44e-11!6;CL:0005022!8.44e-11!6;CL:0000569!4.18e-07!4;CL:0000011!4.18e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002138;8.55e-20;6!CL:0000115;9.50e-08;36!CL:0002593;1.12e-07;2!CL:0002262;1.75e-07;2!CL:1000398;1.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,8.04e-20,6;CL:0002138,8.04e-20,6;CL:0005022,8.04e-20,6;CL:0000115,1.10e-08,36;CL:0002593,1.12e-07,2;CL:0002262,1.75e-07,2;CL:1000398,1.75e-07,2;CL:0002078,6.33e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;8.55e-20;6!UBERON:0004140;4.53e-14;1!UBERON:0006242;1.10e-13;1!UBERON:0010115;1.10e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;1.10e-13;1!DOID:3350;1.75e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,6.65e-14,1;DOID:3350,1.36e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001557!8.51e-10!19;UBERON:0000477!1.04e-09!286;UBERON:0001048!2.41e-09!168;UBERON:0002465!3.34e-08!10;UBERON:0001737!4.09e-08!9;UBERON:0001009!7.52e-08!113;UBERON:0001473!7.91e-08!8;UBERON:0004536!7.91e-08!8;UBERON:0006558!7.91e-08!8;UBERON:0004535!1.38e-07!110;UBERON:0001007!2.20e-07!155;UBERON:0001555!2.20e-07!155;UBERON:0007026!2.20e-07!155;UBERON:0003103!2.78e-07!69;UBERON:0000055!4.81e-07!69;UBERON:0000077!6.09e-07!130;UBERON:0004921!7.56e-07!129;UBERON:0004185!7.56e-07!129;UBERON:0002049!8.68e-07!79;UBERON:0007798!8.68e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;5.24e-15;8!UBERON:0004536;5.24e-15;8!UBERON:0006558;5.24e-15;8!UBERON:0002363;1.10e-13;1!UBERON:0000997;1.10e-13;1!UBERON:0005056;1.10e-13;1!UBERON:0004176;1.10e-13;1!UBERON:0002465;3.99e-12;10!UBERON:0003513;4.27e-08;7!UBERON:0002456;1.12e-07;2!UBERON:0002360;1.75e-07;2!UBERON:0001281;1.75e-07;2!UBERON:0003497;1.75e-07;2!UBERON:0003909;1.75e-07;2!UBERON:0000094;1.75e-07;2!UBERON:0003835;1.75e-07;2!UBERON:0010743;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,5.00e-15,8;UBERON:0004536,5.00e-15,8;UBERON:0006558,5.00e-15,8;UBERON:0002363,9.73e-14,1;UBERON:0007645,9.73e-14,1;UBERON:0007647,9.73e-14,1;UBERON:0010115,9.73e-14,1;UBERON:0000997,1.25e-13,1;UBERON:0005056,1.25e-13,1;UBERON:0002465,3.85e-12,10;UBERON:0003513,4.27e-08,7;UBERON:0002456,1.12e-07,2;UBERON:0002360,1.64e-07,2;UBERON:0000094,1.64e-07,2;UBERON:0010743,1.64e-07,2;UBERON:0001281,1.75e-07,2;UBERON:0003497,1.75e-07,2;UBERON:0003909,1.75e-07,2;UBERON:0003835,1.75e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0.975865597581014,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,1.19245312152671,0,0,0.198762407366705,0,0,0,0,0,0,4.65150166504792,2.49036383880697,4.68608857870538,0,0,0.976248230192678,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.368502951935304,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0,0,0.237270619111097,0.404493924480493,0.98110732562673,0.38474715694639,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0.6970372701606,0,0.532306030317022,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11300293513511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0.391329237864179,0,0,0,0,1.45329133145522,0.150323419414493,0,1.99396161812156,0.330991955875499,0.941798755221676,0,0,0.277349346026277,0,1.37189356380129,0,0.17472666824203,1.89184635718778,0,0,0,0,0,0.225980740780532,0,0,0,0,0,1.28071796843612,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0.717873024576814,0.599037001496973,0,0,2.08268764708851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0,0,0.339936274560377,0,0,0.129282956361551,0,0,0,0,0.471612915298998,0,0,0,0,0,1.08803560673895,1.5041393641362,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0.189403005275089,0,0,0.228840068396924,0.453692771289717,0.466311601748341,0.73927574994817,0,0,0,0.829412415681711,0,0,0,0,0,0.545545977607678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0.818859587550484,0.147856086217045,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,1.77970243027311,0.470958557103084,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0.3414369541879,0,0.430227358820278,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0.534434810531121,0.275684698604535,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0.808468755832877,0.653150243690884,0.684466602170562,0.740872583160463,0.860666464712116,0.332660356546013,0.651226148887796,0,0,0,0,0.122241444182866,0,0,0,0 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| ||
|short_description=p@chr2:1711598..1711606,- | |short_description=p@chr2:1711598..1711606,- | ||
}} | }} |
Latest revision as of 02:21, 29 July 2015
Short description: | p@chr2:1711598..1711606, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:1711598..1711606, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 8.04e-20 | 6 |
endothelial cell of lymphatic vessel | 8.04e-20 | 6 |
vascular lymphangioblast | 8.04e-20 | 6 |
endothelial cell | 1.10e-08 | 36 |
smooth muscle cell of the internal thoracic artery | 1.12e-07 | 2 |
endothelial cell of sinusoid | 1.75e-07 | 2 |
endothelial cell of hepatic sinusoid | 1.75e-07 | 2 |
meso-epithelial cell | 6.33e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 5.00e-15 | 8 |
lymph vasculature | 5.00e-15 | 8 |
lymphatic part of lymphoid system | 5.00e-15 | 8 |
dura mater | 9.73e-14 | 1 |
future meninx | 9.73e-14 | 1 |
ectomeninx | 9.73e-14 | 1 |
future dura mater | 9.73e-14 | 1 |
mammalian vulva | 1.25e-13 | 1 |
external female genitalia | 1.25e-13 | 1 |
lymphoid system | 3.85e-12 | 10 |
trunk blood vessel | 4.27e-08 | 7 |
internal thoracic artery | 1.12e-07 | 2 |
meninx | 1.64e-07 | 2 |
membrane organ | 1.64e-07 | 2 |
meningeal cluster | 1.64e-07 | 2 |
hepatic sinusoid | 1.75e-07 | 2 |
abdomen blood vessel | 1.75e-07 | 2 |
sinusoid | 1.75e-07 | 2 |
abdominal segment blood vessel | 1.75e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 6.65e-14 | 1 |
mesenchymal cell neoplasm | 1.36e-07 | 2 |