FFCP PHASE1:Hg19::chr18:2351165..2351175,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:2351165..2351175,+ | |||
|coexpression_cluster_id=C312 | |||
|description=CAGE_peak_at_chr18:2351165..2351175,+ | |description=CAGE_peak_at_chr18:2351165..2351175,+ | ||
|id=chr18:2351165..2351175,+ | |id=chr18:2351165..2351175,+ | ||
|ontology_enrichment_celltype=CL:0002541!1.57e-09!3;CL:0000039!4.47e-09!7;CL:0000586!4.47e-09!7;CL:1001319!3.10e-08!1;CL:1000600!3.10e-08!1;CL:0000319!6.52e-08!1 | |ontology_enrichment_celltype=CL:0002541!1.57e-09!3;CL:0000039!4.47e-09!7;CL:0000586!4.47e-09!7;CL:1001319!3.10e-08!1;CL:1000600!3.10e-08!1;CL:0000319!6.52e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:1000415;2.74e-50;2!CL:0000083;7.14e-26;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,2.74e-50,2;CL:0000083,7.14e-26,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1799!2.89e-08!1;DOID:10165!2.89e-08!1;DOID:1798!2.89e-08!1;DOID:3030!6.52e-08!1 | |ontology_enrichment_disease=DOID:1799!2.89e-08!1;DOID:10165!2.89e-08!1;DOID:1798!2.89e-08!1;DOID:3030!6.52e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:1799;2.55e-98;1!DOID:10165;2.55e-98;1!DOID:1798;2.55e-98;1!DOID:1793;7.14e-26;4!DOID:170;9.07e-18;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.55e-98,1;DOID:10165,2.55e-98,1;DOID:1798,2.55e-98,1;DOID:1793,7.14e-26,4;DOID:170,9.07e-18,6 | |||
|ontology_enrichment_uberon=UBERON:0001255!4.47e-14!2;UBERON:0001556!4.47e-14!2;UBERON:0000476!1.57e-09!3;UBERON:0000920!1.57e-09!3;UBERON:0003124!6.56e-09!7;UBERON:0004645!3.10e-08!1;UBERON:0001256!3.10e-08!1;UBERON:0001259!3.10e-08!1;UBERON:0001301!4.66e-08!1;UBERON:0005631!1.32e-07!14;UBERON:0000158!1.32e-07!14;UBERON:0001282!1.35e-07!1;UBERON:0009842!1.35e-07!1;UBERON:0003704!1.35e-07!1;UBERON:0001171!1.35e-07!1;UBERON:0001172!1.35e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;4.27e-34;3!UBERON:0002075;3.88e-23;18!UBERON:0002294;1.65e-15;7!UBERON:0001173;1.65e-15;7!UBERON:0001264;3.02e-11;10!UBERON:0002323;3.81e-10;45!UBERON:0004458;1.47e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,4.27e-34,3;UBERON:0006242,4.27e-34,3;UBERON:0002075,3.88e-23,18;UBERON:0002294,2.19e-12,9;UBERON:0001173,2.19e-12,9;UBERON:0004912,2.19e-12,9;UBERON:0001264,3.02e-11,10;UBERON:0002323,7.07e-10,46;UBERON:0004458,2.38e-09,49;UBERON:0003886,1.34e-08,54;UBERON:0002553,9.44e-08,61 | |||
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|short_description=p@chr18:2351165..2351175,+ | |short_description=p@chr18:2351165..2351175,+ | ||
}} | }} |
Latest revision as of 00:06, 26 July 2015
Short description: | p@chr18:2351165..2351175, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:2351165..2351175, + |
Coexpression cluster: | C312_gall_squamous_small_chronic_thyroid_cholangiocellular_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 2.74e-50 | 2 |
epithelial cell of pancreas | 7.14e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 4.27e-34 | 3 |
gall bladder primordium | 4.27e-34 | 3 |
viscus | 3.88e-23 | 18 |
biliary system | 2.19e-12 | 9 |
biliary tree | 2.19e-12 | 9 |
biliary bud | 2.19e-12 | 9 |
pancreas | 3.02e-11 | 10 |
body cavity | 7.07e-10 | 46 |
body cavity or lining | 2.38e-09 | 49 |
body cavity precursor | 1.34e-08 | 54 |
anatomical cavity | 9.44e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.55e-98 | 1 |
endocrine pancreas cancer | 2.55e-98 | 1 |
pancreatic endocrine carcinoma | 2.55e-98 | 1 |
pancreatic cancer | 7.14e-26 | 4 |
endocrine gland cancer | 9.07e-18 | 6 |