FFCP PHASE1:Hg19::chr12:10602087..10602102,-: Difference between revisions
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|id=chr12:10602087..10602102,-
|short_description=p9@KLRC1
|description=CAGE_peak_9_at_KLRC1_5end
|association_with_transcript=-124bp_to_ENST00000543893_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3821 | |EntrezGene=3821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6374 | |HGNC=6374 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-124bp_to_ENST00000543893_5end | |||
|cluster_id=chr12:10602087..10602102,- | |||
|coexpression_cluster_id=C121 | |||
|description=CAGE_peak_9_at_KLRC1_5end | |||
|id=chr12:10602087..10602102,- | |||
|ontology_enrichment_celltype=CL:0002127!4.73e-15!1;CL:0000914!4.73e-15!1;CL:0000911!4.73e-15!1;CL:0000814!4.73e-15!1;CL:0002042!4.73e-15!1;CL:0002039!4.73e-15!1;CL:0002040!4.73e-15!1;CL:0002041!4.73e-15!1;CL:0000893!3.56e-08!2;CL:0002489!3.56e-08!2;CL:0000809!3.56e-08!2;CL:0000808!3.56e-08!2;CL:0000894!3.56e-08!2;CL:0000806!3.56e-08!2;CL:0000807!3.56e-08!2;CL:0000805!3.56e-08!2;CL:0002425!3.56e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002127;9.37e-99;1!CL:0000911;9.37e-99;1!CL:0000814;9.37e-99;1!CL:0000791;7.18e-07;18!CL:0000789;7.18e-07;18!CL:0002419;7.18e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,9.37e-99,1;CL:0000914,9.37e-99,1;CL:0000911,9.37e-99,1;CL:0000814,9.37e-99,1;CL:0002042,9.37e-99,1;CL:0002039,9.37e-99,1;CL:0002040,9.37e-99,1;CL:0002041,9.37e-99,1;CL:0000893,2.74e-50,2;CL:0002489,2.74e-50,2;CL:0000809,2.74e-50,2;CL:0000808,2.74e-50,2;CL:0000894,2.74e-50,2;CL:0000806,2.74e-50,2;CL:0000807,2.74e-50,2;CL:0000805,2.74e-50,2;CL:0002425,2.74e-50,2;CL:0000791,7.18e-07,18;CL:0000789,7.18e-07,18;CL:0002420,7.18e-07,18;CL:0002419,7.18e-07,18;CL:0000790,7.18e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002425;2.74e-50;2!CL:0000790;7.18e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.79e-30!7;UBERON:0002106!1.36e-18!3;UBERON:0004854!1.36e-18!3;UBERON:0009034!1.36e-18!3;UBERON:0002095!1.36e-18!3;UBERON:0004782!1.36e-18!3;UBERON:0003281!1.36e-18!3;UBERON:0009664!1.36e-18!3;UBERON:0002296!1.36e-18!3;UBERON:0005602!1.36e-18!3;UBERON:0001179!1.36e-18!3;UBERON:0006293!1.36e-18!3;UBERON:0006834!8.17e-15!1;UBERON:0002370!2.95e-14!4;UBERON:0005058!2.95e-14!4;UBERON:0009113!2.95e-14!4;UBERON:0003295!2.95e-14!4;UBERON:0005562!2.95e-14!4;UBERON:0009722!2.18e-11!11;UBERON:0007690!2.18e-11!11;UBERON:0003351!8.11e-10!6;UBERON:0000178!1.27e-08!15;UBERON:0000179!1.27e-08!15;UBERON:0000463!1.27e-08!15;UBERON:0008814!1.69e-08!15;UBERON:0005057!1.99e-08!26;UBERON:0000945!1.49e-07!8;UBERON:0010039!1.49e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.93e-08;15!UBERON:0000179;5.93e-08;15!UBERON:0000463;5.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.56e-26,4;UBERON:0005058,5.56e-26,4;UBERON:0009113,5.56e-26,4;UBERON:0003295,5.56e-26,4;UBERON:0005562,5.56e-26,4;UBERON:0003351,7.67e-18,6;UBERON:0004177,1.65e-15,7;UBERON:0005057,1.65e-15,7;UBERON:0000974,2.73e-11,10;UBERON:0003408,2.73e-11,10;UBERON:0001042,2.73e-11,10;UBERON:0009145,2.73e-11,10;UBERON:0006562,2.16e-10,11;UBERON:0009722,2.16e-10,11;UBERON:0007690,2.16e-10,11;UBERON:0000178,5.93e-08,15;UBERON:0000179,5.93e-08,15;UBERON:0000463,5.93e-08,15;UBERON:0008814,7.18e-07,18 | |||
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|short_description=p9@KLRC1 | |||
}} | }} |
Latest revision as of 01:46, 16 September 2015
Short description: | p9@KLRC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_KLRC1_5end |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | -124bp_to_ENST00000543893_5end |
EntrezGene: | KLRC1 |
HGNC: | 6374 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 9.37e-99 | 1 |
immature NK T cell | 9.37e-99 | 1 |
effector T cell | 9.37e-99 | 1 |
mature NK T cell | 9.37e-99 | 1 |
immature NK T cell stage IV | 9.37e-99 | 1 |
immature NK T cell stage I | 9.37e-99 | 1 |
immature NK T cell stage II | 9.37e-99 | 1 |
immature NK T cell stage III | 9.37e-99 | 1 |
thymocyte | 2.74e-50 | 2 |
double negative thymocyte | 2.74e-50 | 2 |
double-positive, alpha-beta thymocyte | 2.74e-50 | 2 |
DN4 thymocyte | 2.74e-50 | 2 |
DN1 thymic pro-T cell | 2.74e-50 | 2 |
DN2 thymocyte | 2.74e-50 | 2 |
DN3 thymocyte | 2.74e-50 | 2 |
immature single positive thymocyte | 2.74e-50 | 2 |
early T lineage precursor | 2.74e-50 | 2 |
mature alpha-beta T cell | 7.18e-07 | 18 |
alpha-beta T cell | 7.18e-07 | 18 |
immature T cell | 7.18e-07 | 18 |
mature T cell | 7.18e-07 | 18 |
immature alpha-beta T cell | 7.18e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.56e-26 | 4 |
hemolymphoid system gland | 5.56e-26 | 4 |
thymic region | 5.56e-26 | 4 |
pharyngeal gland | 5.56e-26 | 4 |
thymus primordium | 5.56e-26 | 4 |
pharyngeal epithelium | 7.67e-18 | 6 |
hemopoietic organ | 1.65e-15 | 7 |
immune organ | 1.65e-15 | 7 |
neck | 2.73e-11 | 10 |
gland of gut | 2.73e-11 | 10 |
chordate pharynx | 2.73e-11 | 10 |
pharyngeal region of foregut | 2.73e-11 | 10 |
pharynx | 2.16e-10 | 11 |
entire pharyngeal arch endoderm | 2.16e-10 | 11 |
early pharyngeal endoderm | 2.16e-10 | 11 |
blood | 5.93e-08 | 15 |
haemolymphatic fluid | 5.93e-08 | 15 |
organism substance | 5.93e-08 | 15 |
pharyngeal arch system | 7.18e-07 | 18 |