FFCP PHASE1:Hg19::chr2:231792452..231792463,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:231792452..231792463,- | |||
|coexpression_cluster_id=C1039 | |||
|description=CAGE_peak_at_chr2:231792452..231792463,- | |description=CAGE_peak_at_chr2:231792452..231792463,- | ||
|id=chr2:231792452..231792463,- | |id=chr2:231792452..231792463,- | ||
|ontology_enrichment_celltype=CL:0000791!4.95e-22!18;CL:0000789!4.95e-22!18;CL:0002420!4.95e-22!18;CL:0002419!4.95e-22!18;CL:0000790!4.95e-22!18;CL:0000625!9.43e-17!11;CL:0000453!2.46e-16!5;CL:0000084!2.05e-15!25;CL:0000827!2.05e-15!25;CL:0000990!3.95e-09!8;CL:0000838!3.34e-08!52;CL:0000542!5.16e-08!53;CL:0000051!5.16e-08!53;CL:0000451!1.75e-07!10;CL:0002127!7.90e-07!1;CL:0000914!7.90e-07!1;CL:0000911!7.90e-07!1;CL:0000814!7.90e-07!1;CL:0002042!7.90e-07!1;CL:0002039!7.90e-07!1;CL:0002040!7.90e-07!1;CL:0002041!7.90e-07!1;CL:0000738!9.83e-07!140 | |ontology_enrichment_celltype=CL:0000791!4.95e-22!18;CL:0000789!4.95e-22!18;CL:0002420!4.95e-22!18;CL:0002419!4.95e-22!18;CL:0000790!4.95e-22!18;CL:0000625!9.43e-17!11;CL:0000453!2.46e-16!5;CL:0000084!2.05e-15!25;CL:0000827!2.05e-15!25;CL:0000990!3.95e-09!8;CL:0000838!3.34e-08!52;CL:0000542!5.16e-08!53;CL:0000051!5.16e-08!53;CL:0000451!1.75e-07!10;CL:0002127!7.90e-07!1;CL:0000914!7.90e-07!1;CL:0000911!7.90e-07!1;CL:0000814!7.90e-07!1;CL:0002042!7.90e-07!1;CL:0002039!7.90e-07!1;CL:0002040!7.90e-07!1;CL:0002041!7.90e-07!1;CL:0000738!9.83e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.69e-21;1!CL:0000911;1.69e-21;1!CL:0000814;1.69e-21;1!CL:0000791;6.19e-18;18!CL:0000789;6.19e-18;18!CL:0002419;6.19e-18;18!CL:0000625;1.03e-16;11!CL:0000084;4.94e-13;25!CL:0000623;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.88e-21,1;CL:0000914,1.88e-21,1;CL:0000911,1.88e-21,1;CL:0000814,1.88e-21,1;CL:0002042,1.88e-21,1;CL:0002039,1.88e-21,1;CL:0002040,1.88e-21,1;CL:0002041,1.88e-21,1;CL:0000791,6.33e-18,18;CL:0000789,6.33e-18,18;CL:0002420,6.33e-18,18;CL:0002419,6.33e-18,18;CL:0000790,6.33e-18,18;CL:0000625,1.03e-16,11;CL:0000084,5.02e-13,25;CL:0000827,5.02e-13,25;CL:0000893,2.02e-11,2;CL:0002489,2.02e-11,2;CL:0000809,2.02e-11,2;CL:0000808,2.02e-11,2;CL:0000894,2.02e-11,2;CL:0000806,2.02e-11,2;CL:0000807,2.02e-11,2;CL:0000805,2.02e-11,2;CL:0002425,2.02e-11,2;CL:0000838,1.32e-09,52;CL:0000542,2.00e-09,53;CL:0000051,2.00e-09,53;CL:0000623,8.29e-08,3;CL:0000825,8.29e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;6.19e-18;18!CL:0002425;1.92e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!9.28e-12!7;UBERON:0000178!3.90e-08!15;UBERON:0000179!3.90e-08!15;UBERON:0000463!3.90e-08!15;UBERON:0002106!1.21e-07!3;UBERON:0004854!1.21e-07!3;UBERON:0009034!1.21e-07!3;UBERON:0002095!1.21e-07!3;UBERON:0004782!1.21e-07!3;UBERON:0003281!1.21e-07!3;UBERON:0009664!1.21e-07!3;UBERON:0002296!1.21e-07!3;UBERON:0005602!1.21e-07!3;UBERON:0001179!1.21e-07!3;UBERON:0006293!1.21e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.12e-12,7;UBERON:0005057,2.12e-12,7;UBERON:0002106,6.34e-08,3;UBERON:0004854,6.34e-08,3;UBERON:0009034,6.34e-08,3;UBERON:0002095,6.34e-08,3;UBERON:0004782,6.34e-08,3;UBERON:0003281,6.34e-08,3;UBERON:0009664,6.34e-08,3;UBERON:0002296,6.34e-08,3;UBERON:0005602,6.34e-08,3;UBERON:0001179,6.34e-08,3;UBERON:0006293,6.34e-08,3 | |||
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|short_description=p@chr2:231792452..231792463,- | |short_description=p@chr2:231792452..231792463,- | ||
}} | }} |
Latest revision as of 07:34, 29 July 2015
Short description: | p@chr2:231792452..231792463, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:231792452..231792463, - |
Coexpression cluster: | C1039_CD4_NK_CD8_CD19_Natural_Whole_chronic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.88e-21 | 1 |
immature NK T cell | 1.88e-21 | 1 |
effector T cell | 1.88e-21 | 1 |
mature NK T cell | 1.88e-21 | 1 |
immature NK T cell stage IV | 1.88e-21 | 1 |
immature NK T cell stage I | 1.88e-21 | 1 |
immature NK T cell stage II | 1.88e-21 | 1 |
immature NK T cell stage III | 1.88e-21 | 1 |
mature alpha-beta T cell | 6.33e-18 | 18 |
alpha-beta T cell | 6.33e-18 | 18 |
immature T cell | 6.33e-18 | 18 |
mature T cell | 6.33e-18 | 18 |
immature alpha-beta T cell | 6.33e-18 | 18 |
CD8-positive, alpha-beta T cell | 1.03e-16 | 11 |
T cell | 5.02e-13 | 25 |
pro-T cell | 5.02e-13 | 25 |
thymocyte | 2.02e-11 | 2 |
double negative thymocyte | 2.02e-11 | 2 |
double-positive, alpha-beta thymocyte | 2.02e-11 | 2 |
DN4 thymocyte | 2.02e-11 | 2 |
DN1 thymic pro-T cell | 2.02e-11 | 2 |
DN2 thymocyte | 2.02e-11 | 2 |
DN3 thymocyte | 2.02e-11 | 2 |
immature single positive thymocyte | 2.02e-11 | 2 |
early T lineage precursor | 2.02e-11 | 2 |
lymphoid lineage restricted progenitor cell | 1.32e-09 | 52 |
lymphocyte | 2.00e-09 | 53 |
common lymphoid progenitor | 2.00e-09 | 53 |
natural killer cell | 8.29e-08 | 3 |
pro-NK cell | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.12e-12 | 7 |
immune organ | 2.12e-12 | 7 |
spleen | 6.34e-08 | 3 |
gastrointestinal system mesentery | 6.34e-08 | 3 |
stomach region | 6.34e-08 | 3 |
mesentery | 6.34e-08 | 3 |
gastrointestinal system serosa | 6.34e-08 | 3 |
mesentery of stomach | 6.34e-08 | 3 |
gut mesentery | 6.34e-08 | 3 |
dorsal mesentery | 6.34e-08 | 3 |
dorsal mesogastrium | 6.34e-08 | 3 |
peritoneal cavity | 6.34e-08 | 3 |
spleen primordium | 6.34e-08 | 3 |