FFCP PHASE1:Hg19::chr2:231988506..231988535,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3357 | |EntrezGene=3357 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5294 | |HGNC=5294 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZU1 | |UniProt=F5GZU1 | ||
|association_with_transcript=-28bp_to_ENST00000540289_5end | |association_with_transcript=-28bp_to_ENST00000540289_5end | ||
|cluster_id=chr2:231988506..231988535,- | |||
|coexpression_cluster_id=C940 | |||
|description=CAGE_peak_6_at_HTR2B_5end | |description=CAGE_peak_6_at_HTR2B_5end | ||
|id=chr2:231988506..231988535,- | |id=chr2:231988506..231988535,- | ||
|ontology_enrichment_celltype=CL:0002590!1.69e-07!3;CL:0000453!6.93e-07!5 | |ontology_enrichment_celltype=CL:0002590!1.69e-07!3;CL:0000453!6.93e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002541;7.90e-14;3!CL:0002537;6.87e-09;5!CL:0000349;1.90e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.24e-13,3;CL:0002537,6.87e-09,5;CL:0000349,2.18e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0010227;9.04e-11;1!UBERON:0010226;9.04e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005284!9.87e-12!5;UBERON:0001155!9.12e-09!9;UBERON:0002300!4.22e-08!3;UBERON:0002118!2.23e-07!5;UBERON:0004532!2.23e-07!5;UBERON:0000059!5.11e-07!11;UBERON:0007023!6.86e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.90e-16;10!UBERON:0000158;6.90e-16;10!UBERON:0003124;7.90e-14;3!UBERON:0000920;7.90e-14;3!UBERON:0004151;1.60e-13;3!UBERON:0002135;3.57e-11;1!UBERON:0002084;9.04e-11;1!UBERON:0002079;9.04e-11;1!UBERON:0006834;9.04e-11;1!UBERON:0001301;9.04e-11;1!UBERON:0002082;9.04e-11;1!UBERON:0000948;4.01e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.24e-13,3;UBERON:0000920,1.24e-13,3;UBERON:0005631,2.51e-11,14;UBERON:0000158,2.51e-11,14;UBERON:0002135,3.76e-11,1;UBERON:0001301,5.57e-11,1;UBERON:0002079,6.14e-11,1;UBERON:0002084,9.05e-11,1;UBERON:0002082,9.05e-11,1;UBERON:0010226,9.05e-11,1;UBERON:0006834,9.97e-11,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,1.77883131343355,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.908144565869588,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.763976851116555,1.17217447210047,0,0.102827492703324,0.300343057843917,3.71574362419752,0,0,0,0,0,0,22.0728636765443,8.32059495290929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0.512556597022804,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0.949138274156178,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,1.36499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76985594558733,0.341826167541004,0,0,0,0,5.67905079091546,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.41532103205343,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,3.35138881526705,0.458320848023367,0,0,0,0.446342914883745,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0.0607495566580247,0,0.394028536495991,0.367182116944987,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42638588066636,0,0,0,0,0,0,0,0.189403005275089,0.754703705257725,0,0,1.20984739010591,0,0,0,0.449803112163605,0,0,0,0.521745061811734,0,0,0,0.727394636810238,0.107410557042488,0.464033759878494,0.796191777397232,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15761237161917,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36401656792831,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0.700118741059814,0,0,0,0,0.286888821570705,0,0,0,0,0,0,1.22241444182866,0,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,1.77883131343355,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.908144565869588,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.763976851116555,1.17217447210047,0,0.102827492703324,0.300343057843917,3.71574362419752,0,0,0,0,0,0,22.0728636765443,8.32059495290929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0.512556597022804,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0.949138274156178,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,1.36499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76985594558733,0.341826167541004,0,0,0,0,5.67905079091546,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.41532103205343,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,3.35138881526705,0.458320848023367,0,0,0,0.446342914883745,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0.0607495566580247,0,0.394028536495991,0.367182116944987,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42638588066636,0,0,0,0,0,0,0,0.189403005275089,0.754703705257725,0,0,1.20984739010591,0,0,0,0.449803112163605,0,0,0,0.521745061811734,0,0,0,0.727394636810238,0.107410557042488,0.464033759878494,0.796191777397232,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15761237161917,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36401656792831,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0.700118741059814,0,0,0,0,0.286888821570705,0,0,0,0,0,0,1.22241444182866,0,0,0.201273793591026,0 | ||
|short_description=p6@HTR2B | |short_description=p6@HTR2B | ||
}} | }} |
Latest revision as of 07:19, 25 September 2015
Short description: | p6@HTR2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HTR2B_5end |
Coexpression cluster: | C940_Mesenchymal_Melanocyte_melanoma_chorionic_Fibroblast_mesenchymal_Endothelial |
Association with transcript: | -28bp_to_ENST00000540289_5end |
EntrezGene: | HTR2B |
HGNC: | 5294 |
UniProt: | F5GZU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.24e-13 | 3 |
amnion mesenchymal stem cell | 6.87e-09 | 5 |
extraembryonic cell | 2.18e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 1.24e-13 | 3 |
egg chorion | 1.24e-13 | 3 |
extraembryonic membrane | 2.51e-11 | 14 |
membranous layer | 2.51e-11 | 14 |
mitral valve | 3.76e-11 | 1 |
epididymis | 5.57e-11 | 1 |
left cardiac atrium | 6.14e-11 | 1 |
heart left ventricle | 9.05e-11 | 1 |
cardiac ventricle | 9.05e-11 | 1 |
future cardiac ventricle | 9.05e-11 | 1 |
uterus or analog | 9.97e-11 | 1 |