FFCP PHASE1:Hg19::chr2:50148754..50148795,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9378 | |EntrezGene=9378 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8008 | |HGNC=8008 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=185bp_to_AF087975_5end | |association_with_transcript=185bp_to_AF087975_5end | ||
|cluster_id=chr2:50148754..50148795,- | |||
|coexpression_cluster_id=C32 | |||
|description=CAGE_peak_16_at_NRXN1_5end | |description=CAGE_peak_16_at_NRXN1_5end | ||
|id=chr2:50148754..50148795,- | |id=chr2:50148754..50148795,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.41e-15;3!UBERON:0006241;4.27e-15;3!UBERON:0003057;4.27e-15;3!UBERON:0006601;3.92e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.06e-87!57;UBERON:0005068!1.06e-87!57;UBERON:0006241!1.06e-87!57;UBERON:0007135!1.06e-87!57;UBERON:0001017!6.39e-85!82;UBERON:0005743!2.66e-80!86;UBERON:0000955!1.03e-74!69;UBERON:0006238!1.03e-74!69;UBERON:0000073!7.81e-74!94;UBERON:0001016!7.81e-74!94;UBERON:0002616!4.45e-73!59;UBERON:0002780!4.86e-69!41;UBERON:0001890!4.86e-69!41;UBERON:0006240!4.86e-69!41;UBERON:0003080!3.65e-67!42;UBERON:0003075!4.21e-61!86;UBERON:0007284!4.21e-61!86;UBERON:0002346!3.77e-60!90;UBERON:0002020!1.19e-58!34;UBERON:0003528!1.19e-58!34;UBERON:0001893!5.02e-58!34;UBERON:0002791!4.39e-56!33;UBERON:0001869!1.09e-54!32;UBERON:0007023!1.15e-47!115;UBERON:0002619!6.67e-47!22;UBERON:0003056!1.67e-45!61;UBERON:0001950!4.12e-42!20;UBERON:0000956!1.09e-40!25;UBERON:0000203!1.09e-40!25;UBERON:0000924!1.66e-40!173;UBERON:0006601!1.66e-40!173;UBERON:0004121!2.52e-40!169;UBERON:0000033!6.58e-38!123;UBERON:0000153!1.71e-35!129;UBERON:0007811!1.71e-35!129;UBERON:0003076!1.47e-20!15;UBERON:0003057!1.47e-20!15;UBERON:0000025!3.86e-20!194;UBERON:0002420!1.85e-19!9;UBERON:0007245!1.85e-19!9;UBERON:0010009!1.85e-19!9;UBERON:0010011!1.85e-19!9;UBERON:0000454!1.85e-19!9;UBERON:0002308!3.04e-19!9;UBERON:0000125!3.04e-19!9;UBERON:0009663!3.62e-15!7;UBERON:0004733!1.51e-14!12;UBERON:0002028!1.51e-14!12;UBERON:0007277!1.51e-14!12;UBERON:0001871!1.59e-14!7;UBERON:0000200!1.77e-14!6;UBERON:0004111!2.87e-14!241;UBERON:0000064!5.56e-14!219;UBERON:0004732!2.81e-13!13;UBERON:0000483!3.01e-13!309;UBERON:0002298!5.09e-13!8;UBERON:0000119!5.67e-13!312;UBERON:0000349!1.24e-12!5;UBERON:0002021!1.34e-12!5;UBERON:0001872!2.97e-12!5;UBERON:0001894!4.53e-12!7;UBERON:0006222!4.53e-12!7;UBERON:0000477!6.70e-12!286;UBERON:0000369!2.02e-09!4;UBERON:0002435!2.02e-09!4;UBERON:0000204!2.02e-09!4;UBERON:0010082!2.02e-09!4;UBERON:0002680!3.49e-09!9;UBERON:0001895!3.49e-09!9;UBERON:0010092!3.49e-09!9;UBERON:0000475!5.38e-09!365;UBERON:0002771!1.17e-08!3;UBERON:0000062!1.67e-08!511;UBERON:0002240!4.20e-08!3;UBERON:0000922!6.03e-08!612;UBERON:0002050!9.91e-08!605;UBERON:0005423!9.91e-08!605;UBERON:0000988!1.51e-07!3;UBERON:0001896!1.54e-07!3;UBERON:0005290!1.54e-07!3;UBERON:0010096!1.54e-07!3;UBERON:0005383!1.69e-07!3;UBERON:0005382!1.69e-07!3;UBERON:0006331!2.26e-07!3;UBERON:0000923!3.13e-07!604;UBERON:0005291!3.13e-07!604;UBERON:0006598!3.13e-07!604;UBERON:0002532!3.13e-07!604;UBERON:0000480!8.73e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.01e-53;22!UBERON:0003528;1.52e-47;34!UBERON:0002020;1.52e-47;34!UBERON:0000956;1.11e-46;25!UBERON:0000203;1.11e-46;25!UBERON:0001869;3.10e-46;32!UBERON:0002791;3.10e-45;32!UBERON:0001950;2.02e-44;20!UBERON:0002780;4.34e-44;41!UBERON:0001890;4.34e-44;41!UBERON:0001893;2.46e-39;34!UBERON:0000073;1.12e-37;53!UBERON:0002616;1.12e-37;53!UBERON:0001017;1.04e-32;75!UBERON:0000955;1.18e-29;68!UBERON:0001016;4.18e-26;83!UBERON:0002784;2.37e-20;4!UBERON:0002021;7.80e-17;5!UBERON:0001870;2.82e-15;3!UBERON:0002240;4.27e-15;3!UBERON:0005174;4.27e-15;3!UBERON:0001137;4.27e-15;3!UBERON:0004733;6.64e-14;12!UBERON:0002028;6.64e-14;12!UBERON:0000200;7.97e-14;6!UBERON:0002680;2.70e-13;9!UBERON:0001895;2.70e-13;9!UBERON:0004732;8.59e-13;13!UBERON:0000125;9.83e-13;9!UBERON:0002308;9.83e-13;9!UBERON:0011216;4.41e-12;132!UBERON:0001871;5.50e-12;6!UBERON:0001894;1.09e-11;7!UBERON:0001954;1.40e-11;2!UBERON:0003022;1.40e-11;2!UBERON:0002421;1.40e-11;2!UBERON:0002600;1.40e-11;2!UBERON:0001905;1.47e-11;2!UBERON:0002757;1.47e-11;2!UBERON:0010134;1.47e-11;2!UBERON:0005408;1.47e-11;2!UBERON:0001899;1.47e-11;2!UBERON:0002771;2.11e-11;2!UBERON:0002702;5.12e-11;2!UBERON:0001897;1.49e-10;2!UBERON:0010225;1.49e-10;2!UBERON:0002148;2.93e-10;2!UBERON:0001875;2.93e-10;2!UBERON:0006331;2.93e-10;2!UBERON:0009662;2.93e-10;2!UBERON:0006514;2.93e-10;2!UBERON:0000349;4.88e-10;5!UBERON:0001872;7.43e-10;5!UBERON:0007023;1.27e-09;114!UBERON:0002420;1.11e-08;9!UBERON:0007245;1.11e-08;9!UBERON:0010009;1.11e-08;9!UBERON:0010011;1.11e-08;9!UBERON:0000454;1.11e-08;9!UBERON:0002037;5.06e-08;6!UBERON:0002298;1.63e-07;6!UBERON:0000988;4.05e-07;3!UBERON:0010314;5.28e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.97e-82,56;UBERON:0005068,1.97e-82,56;UBERON:0006241,1.97e-82,56;UBERON:0007135,1.97e-82,56;UBERON:0001017,1.95e-74,81;UBERON:0000073,3.32e-71,53;UBERON:0002616,3.32e-71,53;UBERON:0001016,1.84e-66,89;UBERON:0000955,1.08e-61,68;UBERON:0006238,1.08e-61,68;UBERON:0002780,4.86e-58,41;UBERON:0001890,4.86e-58,41;UBERON:0003080,4.86e-58,41;UBERON:0006240,4.86e-58,41;UBERON:0003528,5.52e-58,34;UBERON:0002020,5.52e-58,34;UBERON:0003075,1.62e-54,82;UBERON:0007284,1.62e-54,82;UBERON:0002619,2.81e-53,22;UBERON:0002346,1.06e-51,86;UBERON:0002791,1.25e-50,32;UBERON:0001869,1.25e-50,32;UBERON:0001893,1.75e-47,34;UBERON:0000956,1.05e-46,25;UBERON:0000203,1.05e-46,25;UBERON:0001950,1.96e-44,20;UBERON:0010371,1.10e-41,104;UBERON:0003056,1.32e-37,61;UBERON:0010314,7.81e-34,132;UBERON:0007023,2.00e-32,114;UBERON:0004121,9.35e-32,171;UBERON:0000924,9.35e-32,171;UBERON:0006601,9.35e-32,171;UBERON:0011216,6.27e-26,223;UBERON:0003076,2.13e-24,15;UBERON:0003057,2.13e-24,15;UBERON:0000025,4.41e-21,192;UBERON:0002784,2.15e-20,4;UBERON:0002021,8.13e-17,5;UBERON:0004111,1.70e-15,240;UBERON:0001870,3.43e-15,3;UBERON:0002240,4.38e-15,3;UBERON:0005174,4.38e-15,3;UBERON:0001137,4.38e-15,3;UBERON:0004733,6.72e-14,12;UBERON:0002028,6.72e-14,12;UBERON:0007277,6.72e-14,12;UBERON:0000200,7.84e-14,6;UBERON:0002680,2.85e-13,9;UBERON:0001895,2.85e-13,9;UBERON:0010092,2.85e-13,9;UBERON:0004732,8.69e-13,13;UBERON:0000125,1.08e-12,9;UBERON:0002308,1.08e-12,9;UBERON:0001871,4.98e-12,6;UBERON:0001894,1.03e-11,7;UBERON:0006222,1.03e-11,7;UBERON:0001954,1.33e-11,2;UBERON:0003022,1.33e-11,2;UBERON:0002421,1.33e-11,2;UBERON:0002600,1.33e-11,2;UBERON:0001905,1.47e-11,2;UBERON:0002757,1.47e-11,2;UBERON:0010134,1.47e-11,2;UBERON:0005408,1.47e-11,2;UBERON:0001899,1.47e-11,2;UBERON:0002771,2.01e-11,2;UBERON:0002702,5.26e-11,2;UBERON:0000483,1.15e-10,306;UBERON:0001897,1.35e-10,2;UBERON:0010225,1.35e-10,2;UBERON:0000119,1.70e-10,309;UBERON:0001875,2.54e-10,2;UBERON:0006514,2.54e-10,2;UBERON:0002148,3.23e-10,2;UBERON:0006331,3.23e-10,2;UBERON:0009662,3.23e-10,2;UBERON:0000349,4.67e-10,5;UBERON:0001872,6.90e-10,5;UBERON:0002420,1.14e-08,9;UBERON:0007245,1.14e-08,9;UBERON:0010009,1.14e-08,9;UBERON:0010011,1.14e-08,9;UBERON:0000454,1.14e-08,9;UBERON:0002037,5.06e-08,6;UBERON:0006215,5.06e-08,6;UBERON:0002298,1.65e-07,6;UBERON:0000988,4.31e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,2.31986643833309,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,9.28418148309384,0,0,4.01138275443188,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,2.90799823828566,0.649376687132959,3.99227596002388,0,0,0,0,0,0,0,0,0,0.885741385813839,1.08536794762867,9.15490417902499,3.09621927807429,2.65992857058193,2.19385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0.468528891450678,0,0,0,0,0,4.89716418608784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,1.2029051231617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,1.36905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,10.3379859675209,10.4876622705913,0,0,0.415440338029185,0,0,0.668245123238271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29282956361551,1.71902382265497,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,2.65820453990096,4.88105059607853,9.13893794157449,1.72022758707021,0.998361463831671,0.372578417648301,0.138348634936231,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.7065744758217,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0,0,0,0,0.642292250964595,5.6678630530234,17.2404567781723,4.71767637753736,10.3349395450904,0.207471757392654,5.00574501458738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,3.90539049306924,17.7750644991018,0.443910671357348,9.29857175330973,0,0,0,0,8.0355275381743,23.2035768330989,0,0.227662191351298,0,0,0,0.339848664884159,0.460409414939944,0,0,0,0.471346769748006,0,0.913158720509496,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.994753875806841,0,0,0,0.301925687133347,0,0.218559560503957,0,0.490296643507811,0,1.76677620403451,2.0793248022896,4.6492130034174,0,0,0,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0.135982980381829,7.41796173578642,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31667775783512,1.75836092965222,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,2.31986643833309,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,9.28418148309384,0,0,4.01138275443188,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,2.90799823828566,0.649376687132959,3.99227596002388,0,0,0,0,0,0,0,0,0,0.885741385813839,1.08536794762867,9.15490417902499,3.09621927807429,2.65992857058193,2.19385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0.468528891450678,0,0,0,0,0,4.89716418608784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,1.2029051231617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,1.36905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,10.3379859675209,10.4876622705913,0,0,0.415440338029185,0,0,0.668245123238271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29282956361551,1.71902382265497,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,2.65820453990096,4.88105059607853,9.13893794157449,1.72022758707021,0.998361463831671,0.372578417648301,0.138348634936231,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.7065744758217,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0,0,0,0,0.642292250964595,5.6678630530234,17.2404567781723,4.71767637753736,10.3349395450904,0.207471757392654,5.00574501458738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,3.90539049306924,17.7750644991018,0.443910671357348,9.29857175330973,0,0,0,0,8.0355275381743,23.2035768330989,0,0.227662191351298,0,0,0,0.339848664884159,0.460409414939944,0,0,0,0.471346769748006,0,0.913158720509496,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.994753875806841,0,0,0,0.301925687133347,0,0.218559560503957,0,0.490296643507811,0,1.76677620403451,2.0793248022896,4.6492130034174,0,0,0,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0.135982980381829,7.41796173578642,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31667775783512,1.75836092965222,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0 | ||
|short_description=p16@NRXN1 | |short_description=p16@NRXN1 | ||
}} | }} |
Latest revision as of 13:14, 17 September 2015
Short description: | p16@NRXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_NRXN1_5end |
Coexpression cluster: | C32_middle_occipital_parietal_hippocampus_amygdala_medial_olfactory |
Association with transcript: | 185bp_to_AF087975_5end |
EntrezGene: | NRXN1 |
HGNC: | 8008 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data