FFCP PHASE1:Hg19::chr19:17356189..17356221,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2063 | |EntrezGene=2063 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7977 | |HGNC=7977 | ||
|TSSclassifier=strong | |||
|UniProt=P10588,F1D8R3 | |UniProt=P10588,F1D8R3 | ||
|association_with_transcript=-38bp_to_ENST00000291442,NM_005234,uc002nfq.2_5end | |association_with_transcript=-38bp_to_ENST00000291442,NM_005234,uc002nfq.2_5end | ||
|cluster_id=chr19:17356189..17356221,- | |||
|description=CAGE_peak_2_at_NR2F6_5end | |description=CAGE_peak_2_at_NR2F6_5end | ||
|id=chr19:17356189..17356221,- | |id=chr19:17356189..17356221,- | ||
|ontology_enrichment_celltype=CL:0000066!8.87e-17!254;CL:0002076!9.55e-12!43;CL:0000223!3.15e-10!59;CL:0000220!2.74e-07!246;CL:0002321!2.77e-07!248 | |ontology_enrichment_celltype=CL:0000066!8.87e-17!254;CL:0002076!9.55e-12!43;CL:0000223!3.15e-10!59;CL:0000220!2.74e-07!246;CL:0002321!2.77e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.56e-10;42!CL:0000349;5.03e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.41e-13,42;CL:0000066,1.34e-10,253;CL:0000223,1.35e-10,58;CL:0000349,4.28e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.69e-22!169;UBERON:0000925!1.69e-22!169;UBERON:0006595!1.69e-22!169;UBERON:0003104!6.32e-18!238;UBERON:0009142!6.32e-18!238;UBERON:0001007!7.33e-18!155;UBERON:0001555!7.33e-18!155;UBERON:0007026!7.33e-18!155;UBERON:0002100!6.36e-16!216;UBERON:0000481!4.50e-15!347;UBERON:0000077!4.79e-14!130;UBERON:0004921!1.65e-13!129;UBERON:0004185!1.65e-13!129;UBERON:0000468!1.30e-12!659;UBERON:0000475!6.19e-12!365;UBERON:0000466!3.50e-11!126;UBERON:0000161!3.69e-11!35;UBERON:0009569!5.31e-11!113;UBERON:0001004!2.15e-10!72;UBERON:0005256!2.47e-10!143;UBERON:0003102!4.65e-10!95;UBERON:0000467!6.21e-10!625;UBERON:0000464!7.69e-10!104;UBERON:0000480!7.81e-10!626;UBERON:0000926!1.06e-08!448;UBERON:0004120!1.06e-08!448;UBERON:0006603!1.06e-08!448;UBERON:0000166!2.31e-08!21;UBERON:0005911!2.57e-08!82;UBERON:0001041!4.02e-08!98;UBERON:0000165!4.07e-08!28;UBERON:0000930!4.07e-08!28;UBERON:0000915!4.52e-08!52;UBERON:0001008!7.82e-08!45;UBERON:0005177!7.86e-08!107;UBERON:0000062!9.02e-08!511;UBERON:0000922!1.02e-07!612;UBERON:0000477!1.51e-07!286;UBERON:0006554!1.60e-07!44;UBERON:0003064!1.66e-07!37;UBERON:0005631!1.95e-07!14;UBERON:0000158!1.95e-07!14;UBERON:0002050!2.51e-07!605;UBERON:0005423!2.51e-07!605;UBERON:0003914!2.59e-07!118;UBERON:0001048!3.14e-07!168;UBERON:0000923!4.46e-07!604;UBERON:0005291!4.46e-07!604;UBERON:0006598!4.46e-07!604;UBERON:0002532!4.46e-07!604;UBERON:0000490!5.70e-07!138;UBERON:0003103!7.04e-07!69;UBERON:0005156!8.54e-07!59;UBERON:0000990!8.54e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000161;6.01e-09;19!UBERON:0000166;6.01e-09;19!UBERON:0000165;1.73e-08;28!UBERON:0000344;3.03e-07;20!UBERON:0004921;4.77e-07;33!UBERON:0001555;5.95e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.57e-19,160;UBERON:0000925,1.57e-19,160;UBERON:0006595,1.57e-19,160;UBERON:0001007,1.15e-14,145;UBERON:0001555,1.15e-14,145;UBERON:0007026,1.15e-14,145;UBERON:0000161,9.46e-13,36;UBERON:0002100,2.36e-11,199;UBERON:0004921,3.86e-11,118;UBERON:0000166,1.37e-10,22;UBERON:0000915,5.33e-10,52;UBERON:0005631,5.47e-10,14;UBERON:0000158,5.47e-10,14;UBERON:0001004,1.07e-09,74;UBERON:0001008,2.72e-09,48;UBERON:0006554,6.88e-09,47;UBERON:0009569,6.95e-09,112;UBERON:0000165,7.32e-09,29;UBERON:0000930,7.32e-09,29;UBERON:0003124,5.36e-08,7;UBERON:0003104,2.57e-07,160;UBERON:0009142,2.57e-07,160;UBERON:0000344,2.94e-07,20;UBERON:0005911,2.95e-07,82;UBERON:0004923,3.22e-07,66;UBERON:0003102,4.34e-07,99 | |||
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| ||
|short_description=p2@NR2F6 | |short_description=p2@NR2F6 | ||
}} | }} |
Latest revision as of 11:14, 16 September 2015
Short description: | p2@NR2F6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NR2F6_5end |
Coexpression cluster: | NA |
Association with transcript: | -38bp_to_ENST00000291442, NM_005234, uc002nfq.2_5end |
EntrezGene: | NR2F6 |
HGNC: | 7977 |
UniProt: | P10588F1D8R3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.41e-13 | 42 |
epithelial cell | 1.34e-10 | 253 |
endodermal cell | 1.35e-10 | 58 |
extraembryonic cell | 4.28e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.57e-19 | 160 |
endoderm | 1.57e-19 | 160 |
presumptive endoderm | 1.57e-19 | 160 |
digestive system | 1.15e-14 | 145 |
digestive tract | 1.15e-14 | 145 |
primitive gut | 1.15e-14 | 145 |
orifice | 9.46e-13 | 36 |
trunk | 2.36e-11 | 199 |
subdivision of digestive tract | 3.86e-11 | 118 |
oral opening | 1.37e-10 | 22 |
thoracic segment of trunk | 5.33e-10 | 52 |
extraembryonic membrane | 5.47e-10 | 14 |
membranous layer | 5.47e-10 | 14 |
respiratory system | 1.07e-09 | 74 |
renal system | 2.72e-09 | 48 |
urinary system structure | 6.88e-09 | 47 |
subdivision of trunk | 6.95e-09 | 112 |
mouth | 7.32e-09 | 29 |
stomodeum | 7.32e-09 | 29 |
chorion | 5.36e-08 | 7 |
mesenchyme | 2.57e-07 | 160 |
entire embryonic mesenchyme | 2.57e-07 | 160 |
mucosa | 2.94e-07 | 20 |
endo-epithelium | 2.95e-07 | 82 |
organ component layer | 3.22e-07 | 66 |
surface structure | 4.34e-07 | 99 |