FFCP PHASE1:Hg19::chr19:22018938..22018963,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7594 | |EntrezGene=7594 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13109 | |HGNC=13109 | ||
|TSSclassifier=strong | |||
|UniProt=P17038 | |UniProt=P17038 | ||
|association_with_transcript=6bp_to_NM_003423,uc002nqj.2,uc002nqk.2_5end | |association_with_transcript=6bp_to_NM_003423,uc002nqj.2,uc002nqk.2_5end | ||
|cluster_id=chr19:22018938..22018963,- | |||
|description=CAGE_peak_3_at_ZNF43_5end | |description=CAGE_peak_3_at_ZNF43_5end | ||
|id=chr19:22018938..22018963,- | |id=chr19:22018938..22018963,- | ||
|ontology_enrichment_celltype=CL:0000037!3.60e-11!172;CL:0000566!3.60e-11!172;CL:0000738!4.13e-10!140;CL:0002032!5.54e-10!165;CL:0000837!5.54e-10!165;CL:0000988!1.36e-08!182;CL:0002031!5.21e-07!124 | |ontology_enrichment_celltype=CL:0000037!3.60e-11!172;CL:0000566!3.60e-11!172;CL:0000738!4.13e-10!140;CL:0002032!5.54e-10!165;CL:0000837!5.54e-10!165;CL:0000988!1.36e-08!182;CL:0002031!5.21e-07!124 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.27e-13,168;CL:0002032,1.33e-11,161;CL:0000837,1.33e-11,161;CL:0000738,1.77e-11,136;CL:0000988,1.22e-10,177;CL:0002031,8.88e-08,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.70e-12!82;UBERON:0007023!3.04e-12!115;UBERON:0005743!1.48e-11!86;UBERON:0000073!1.36e-10!94;UBERON:0001016!1.36e-10!94;UBERON:0001049!1.79e-10!57;UBERON:0005068!1.79e-10!57;UBERON:0006241!1.79e-10!57;UBERON:0007135!1.79e-10!57;UBERON:0002616!1.33e-08!59;UBERON:0000955!1.95e-08!69;UBERON:0006238!1.95e-08!69;UBERON:0003075!5.20e-08!86;UBERON:0007284!5.20e-08!86;UBERON:0003080!1.77e-07!42;UBERON:0002780!3.11e-07!41;UBERON:0001890!3.11e-07!41;UBERON:0006240!3.11e-07!41;UBERON:0002346!3.74e-07!90 | |ontology_enrichment_uberon=UBERON:0001017!2.70e-12!82;UBERON:0007023!3.04e-12!115;UBERON:0005743!1.48e-11!86;UBERON:0000073!1.36e-10!94;UBERON:0001016!1.36e-10!94;UBERON:0001049!1.79e-10!57;UBERON:0005068!1.79e-10!57;UBERON:0006241!1.79e-10!57;UBERON:0007135!1.79e-10!57;UBERON:0002616!1.33e-08!59;UBERON:0000955!1.95e-08!69;UBERON:0006238!1.95e-08!69;UBERON:0003075!5.20e-08!86;UBERON:0007284!5.20e-08!86;UBERON:0003080!1.77e-07!42;UBERON:0002780!3.11e-07!41;UBERON:0001890!3.11e-07!41;UBERON:0006240!3.11e-07!41;UBERON:0002346!3.74e-07!90 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.44e-12,81;UBERON:0007023,2.51e-11,114;UBERON:0001016,5.37e-11,89;UBERON:0001049,2.47e-10,56;UBERON:0005068,2.47e-10,56;UBERON:0006241,2.47e-10,56;UBERON:0007135,2.47e-10,56;UBERON:0000073,1.16e-09,53;UBERON:0002616,1.16e-09,53;UBERON:0000955,3.67e-08,68;UBERON:0006238,3.67e-08,68;UBERON:0002780,2.43e-07,41;UBERON:0001890,2.43e-07,41;UBERON:0003080,2.43e-07,41;UBERON:0006240,2.43e-07,41;UBERON:0003075,7.11e-07,82;UBERON:0007284,7.11e-07,82 | |||
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| ||
|short_description=p3@ZNF43 | |short_description=p3@ZNF43 | ||
}} | }} |
Latest revision as of 22:56, 16 September 2015
Short description: | p3@ZNF43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZNF43_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_NM_003423, uc002nqj.2, uc002nqk.2_5end |
EntrezGene: | ZNF43 |
HGNC: | 13109 |
UniProt: | P17038 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.27e-13 | 168 |
hematopoietic oligopotent progenitor cell | 1.33e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.33e-11 | 161 |
leukocyte | 1.77e-11 | 136 |
hematopoietic cell | 1.22e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 8.88e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.44e-12 | 81 |
adult organism | 2.51e-11 | 114 |
nervous system | 5.37e-11 | 89 |
neural tube | 2.47e-10 | 56 |
neural rod | 2.47e-10 | 56 |
future spinal cord | 2.47e-10 | 56 |
neural keel | 2.47e-10 | 56 |
regional part of nervous system | 1.16e-09 | 53 |
regional part of brain | 1.16e-09 | 53 |
brain | 3.67e-08 | 68 |
future brain | 3.67e-08 | 68 |
regional part of forebrain | 2.43e-07 | 41 |
forebrain | 2.43e-07 | 41 |
anterior neural tube | 2.43e-07 | 41 |
future forebrain | 2.43e-07 | 41 |
neural plate | 7.11e-07 | 82 |
presumptive neural plate | 7.11e-07 | 82 |