FFCP PHASE1:Hg19::chr2:74129552..74129589,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:74129552..74129589,- | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_at_chr2:74129552..74129589,- | |description=CAGE_peak_at_chr2:74129552..74129589,- | ||
|id=chr2:74129552..74129589,- | |id=chr2:74129552..74129589,- | ||
|ontology_enrichment_celltype=CL:0002594!1.71e-08!4 | |ontology_enrichment_celltype=CL:0002594!1.71e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002594;7.96e-19;4!CL:0002590;6.66e-07;3!CL:0002622;6.66e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,5.88e-19,4;CL:0002622,6.09e-07,3;CL:0002590,8.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.26e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.24e-12!115;UBERON:0000059!8.36e-10!11;UBERON:0001155!2.89e-09!9;UBERON:0000160!1.44e-08!27;UBERON:0001310!1.71e-08!4;UBERON:0003101!2.61e-08!22;UBERON:0000079!2.61e-08!22;UBERON:0005156!1.62e-07!59;UBERON:0000990!1.62e-07!59;UBERON:0005409!3.94e-07!35;UBERON:0000481!4.63e-07!347;UBERON:0006947!5.66e-07!3;UBERON:0004054!5.66e-07!3;UBERON:0001007!6.84e-07!155;UBERON:0001555!6.84e-07!155;UBERON:0007026!6.84e-07!155;UBERON:0004921!9.05e-07!129;UBERON:0004185!9.05e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.53e-20;17!UBERON:0005409;3.36e-19;22!UBERON:0001310;7.96e-19;4!UBERON:0006947;3.39e-15;3!UBERON:0004054;3.39e-15;3!UBERON:0004921;3.90e-14;33!UBERON:0005904;1.61e-11;4!UBERON:0000059;5.34e-11;11!UBERON:0003101;1.16e-09;22!UBERON:0000079;1.16e-09;22!UBERON:0002108;4.09e-09;4!UBERON:0001155;7.43e-09;9!UBERON:0010260;1.96e-08;9!UBERON:0001555;1.36e-07;54!UBERON:0004175;1.41e-07;21!UBERON:0003135;2.92e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.50e-20,17;UBERON:0001310,5.88e-19,4;UBERON:0005409,9.10e-17,25;UBERON:0006947,3.74e-15,3;UBERON:0004054,3.74e-15,3;UBERON:0005904,1.73e-11,4;UBERON:0000059,6.33e-11,11;UBERON:0003101,1.12e-09,22;UBERON:0000079,1.12e-09,22;UBERON:0002108,3.32e-09,4;UBERON:0005156,5.67e-09,59;UBERON:0000990,5.67e-09,59;UBERON:0001155,8.67e-09,9;UBERON:0010260,1.72e-08,9;UBERON:0001046,2.43e-08,19;UBERON:0007023,3.16e-08,114;UBERON:0003064,1.97e-07,28;UBERON:0003135,3.02e-07,11 | |||
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| ||
|short_description=p@chr2:74129552..74129589,- | |short_description=p@chr2:74129552..74129589,- | ||
}} | }} |
Latest revision as of 12:12, 29 July 2015
Short description: | p@chr2:74129552..74129589, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:74129552..74129589, - |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 5.88e-19 | 4 |
prostate stromal cell | 6.09e-07 | 3 |
smooth muscle cell of the brain vasculature | 8.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.50e-20 | 17 |
umbilical artery | 5.88e-19 | 4 |
gastrointestinal system | 9.10e-17 | 25 |
male genital duct | 3.74e-15 | 3 |
internal male genitalia | 3.74e-15 | 3 |
duct of male reproductive system | 1.73e-11 | 4 |
large intestine | 6.33e-11 | 11 |
male organism | 1.12e-09 | 22 |
male reproductive system | 1.12e-09 | 22 |
small intestine | 3.32e-09 | 4 |
reproductive structure | 5.67e-09 | 59 |
reproductive system | 5.67e-09 | 59 |
colon | 8.67e-09 | 9 |
umbilical blood vessel | 1.72e-08 | 9 |
hindgut | 2.43e-08 | 19 |
adult organism | 3.16e-08 | 114 |
intermediate mesoderm | 1.97e-07 | 28 |
male reproductive organ | 3.02e-07 | 11 |